Cflr011048.1
Basic Information
- Insect
- Copidosoma floridanum
- Gene Symbol
- ZFY
- Assembly
- GCA_000648655.2
- Location
- NW:699407-739870[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 0.26 11 6.1 1.7 1 21 11 31 11 32 0.93 2 15 1.5 64 3.7 0.3 2 23 452 472 451 472 0.94 3 15 4.6 1.9e+02 2.2 0.2 1 21 558 578 558 582 0.89 4 15 0.64 27 4.9 0.6 3 22 605 624 603 627 0.87 5 15 0.066 2.8 8.0 3.2 2 23 642 664 641 664 0.95 6 15 0.62 26 4.9 3.1 1 23 676 700 676 700 0.91 7 15 0.013 0.53 10.3 1.3 2 23 715 737 715 737 0.91 8 15 0.031 1.3 9.0 0.2 1 21 742 762 742 763 0.94 9 15 0.00022 0.0091 15.8 0.8 1 23 824 845 824 845 0.98 10 15 1.4 60 3.8 3.3 1 19 851 869 851 872 0.88 11 15 0.00026 0.011 15.6 3.5 1 23 890 912 890 912 0.98 12 15 0.027 1.1 9.2 0.0 1 23 917 942 917 942 0.94 13 15 0.00022 0.0092 15.8 0.5 1 23 951 973 951 973 0.98 14 15 2.2 91 3.2 5.0 1 23 984 1008 984 1008 0.95 15 15 0.0089 0.37 10.7 0.8 1 21 1014 1034 1014 1039 0.93
Sequence Information
- Coding Sequence
- ATGGAATCCTACGAGGAAGACGACGACACGCACTACTGCAACAAGTGCCACTTGACCATCACTGGGCTGGACAACTACGTCAGGCATCGGCAGTCCGGATGCCGCACAACCACGGAAAACAAGAGCGTGTACGACTGCCCACCGCCAAGCAGCGTCTCCTACCCCGAATGCCTGAACGCGGACGACTTCTTCAGTTCTCTGGAGCTGCAGAGCAGCACCAAGCCACAACCACCTCGAGCGGCCGACTTGCTGGACGTGCGTCCGAAGCAACCGTGCCGTCCCGAGGAGCGGCGAAAGAGACCGCGCAGGGACATCAAGAGCCCGGACGGCATGAAGAACGAGCCCAAGGACAAAATACCGCACCTCCTGCCGGCCGTCGACGACATCGACGACCTGGCTTCCCTGGTATTCCCCGAGCTCGGTCCCGCCGAGGCCACCACTTCCGCCAATCCCACCCAAACCATGAGCCCCGTTCCTTCCACCGCTGTGTCTATGGACAAGGCCGTCGACGACGGCAGGACTGGCAGCTCCAAGACCAACGTGCCCCACAAACAGGAGGCCAAGCACGATGACAGCAGCCAGGGCAGGAGGGGCGAGTATCCGCACTCGGACTGGCTCGAGGAGTCTGTATATAGCGAGGAGATGCACCACCTGGACAGGTACGCCGCCGAGTCAGATTACGAGCAGGAGGACGACATGGAGGACAGCACCGATCAGGATGTCACGCTCGACGACGACTCGTACTCAGATTCGGACGACCAGGACCACGTGGATTACAGGTATCCACCTGGGACTCATACGGGGGGTAAGTGGCGACCCCCTGGCATGGTTCATGAGGACATGCACGACGACGAGCTCGACACGGACGTGGCCGAGCATCACCACGACAATCATCCACATCCCAGCTACACCGGTGGCAAGTGGAATCCAGCCGACTCGACCGCTGTTCGGGTGTTCACGAAGCAAGATAACTCGGAGTGCAGTCAAACGAGGCGTCAGTTGCAGCAACCACCGCCCGACCACACCCACGGCAAGTGGGTTCCGGGTGCGCGGGCCGACGTGGCCACGGGATATTGGTGCAGTCCTTGCGGTCGAAAGTTGGCCTCACAGCTGGTTTACAAGCGACACCTCGCCTCCGAGTTGCACGCCCGCAGGAGCATCCAGGAAATCGACGGTCTCGTGCCGCCCAGGGCTCTCAGCCGCCGGCAGAGGGTATTGGCTTCCAAAAGAACGAGCACGACGTCGTCATTGGCGGATTCAGTATCCGCGCCATCCTCATCGAGTACAGCATCGGAAGAGCAAAGGCATTCGTCGCAAAATCCCCGGCGCCGTAGGCGCGAGAAGGAGGTACTCACGTGCGAGATGTGCCGTGCTCGCGTGCGCCGCGCCCAACTGGGCAAGCATCTACTCTCGCACTATCACTGTCGCGTAGCAGGTGCCATTGCCGCCGCCACAACAACTACTACACGGAGCCACGAGGTGGACGACAATGACACGCAACGCGAGCAACAACAGCACCAGCGCTTCCTGCTCGAGAACATGGCCAACATCGTGCGCCAGTGTCCCTTCCAGTGTGCCCCTTGTCGATTTTATTGCAACACCGAGGACACGTTCCTTAGGCACTGGCGCTCCCAAGACCACAGGCACGTGGTTTCCAAGATCGGCGGGAGCTTCGTGTGCGCCCTTTGCGATTTCTGGTGCAAAGATAACGAGAGCGTGGAGGTGCACATAATGGAACAAGGTCATCGAGATGCCGTTTCAATGATTAATGGCTCCGTGCCGATGGTCATTCGTCGCCAGCGGATACTCGCGTGCTCCGCCTGTTGCAAGCCATTCAGGTACAACGTTCAGCTTCGCGTACACGCTAGGGAAACCGGTCACGAGGTCGACGAGAGCGCCTCCGACGAGTACCAATGCATCATGAAATGCAGCCATTGCGAGCACGTGGCCCGTTCCAAGCTCGCTCTGCAACGACACCAGCTCAACCAGCACAAGACCGAGCCCCACCCCAATGACCTCAATCCGTACTTTTGCTCGTTCTGCTCGACGAATTTCAAAACCAAGAGAAAAGCCGTCGGCCACAGGCGCACATCCAGTCACAAGGAAAAGGTCAAAAGTTCGAAAAAGGGGTCTTGCCAGCGCGTTTGTGCACACTGCAAGGAGACGCTAAGCAATTTGGCTGAATTCAAACGGCACATGTTCGACACGCACTTAGAGCTGTGTCACAGGTGTGGCAAGTGCGGGGAAAAGTTTGCCATCCCGCAAGACGTCACGACTCACACGCGAGACAATCGCTGCTCACGAAGCAACGTTACCACCGCTGATGCCGCAGCTGCGTACGCGTGCGATAAATGTTGTTTCAATACGGAGTCGGAGTCTGAATTTATGTTCCACCAAGTGTTGCACGGGAATCCCGTTGAGATTGACTCTGCACCCGGAGCCGGGAGGAAGACGCGCGACAGACCAAAGTACCCTTGTCCGTTGTGCCAAAAGTTATTTTCCAAGTTCAACTTGAGGGAACACTTGAGAGTGCATACCGGGGAACGTCCTTATTCCTGTACCCATTGCAGAGCCACTTTCGTGCGCAGGTGTGACATGGCTGGCCATTGCAACAAGTGCTCCGATTCTGCTGGTGTAGAAGCTACCAAGGACGCGAGGGAACGAAAATACGTATGTCACGAATGTGGAGATGGATTCTACACCAAGCACACACTCAGGCAGCACATACTGCGTCATGCTGGTAAACAGTACAAATGTGGGTTACCAGGTTGCCCGATCATCCTCCGCACCGCAAACGAGTTGAGGAGACACAGGGAACTCGTGCACGAGAGTACCAAAGAAATCAGGCCATTTAAATGCAACGATTGCACCTACGCTGCGAAAACAAACGTCCAGCTTGCCAGgCACAGGCAAATCCATGACACACCAAACGAGGACAATCCGGACAGTCACGTGTGCTCGTTCGAAGGCTGCAACTTCAAAACTAACAACGGCTCGCACATGAAGCGGCACTTTCGGCTGCACAGCGGAACGAAGCCTTACAAGTGCCGGTACTGCACCTACGCGAGCAACAACGTGGAAAACCTCCGTAAGCACGTGCTGTCGACAAAGATCCACGTCGGCAAAACGATCTACCAGTGCGAGTCGTGTAGAGCCGGCGAGGCTTTCGGGACCAACTACTCGAAGGAGCTGCGCGCCCACTTGCTGGAGTCGCATCCGGACGAGTACCCAACCCCTGACGCGGCCAAACGATACGTCGacgatatttttcaacaatcggCAACTCTGTGA
- Protein Sequence
- MESYEEDDDTHYCNKCHLTITGLDNYVRHRQSGCRTTTENKSVYDCPPPSSVSYPECLNADDFFSSLELQSSTKPQPPRAADLLDVRPKQPCRPEERRKRPRRDIKSPDGMKNEPKDKIPHLLPAVDDIDDLASLVFPELGPAEATTSANPTQTMSPVPSTAVSMDKAVDDGRTGSSKTNVPHKQEAKHDDSSQGRRGEYPHSDWLEESVYSEEMHHLDRYAAESDYEQEDDMEDSTDQDVTLDDDSYSDSDDQDHVDYRYPPGTHTGGKWRPPGMVHEDMHDDELDTDVAEHHHDNHPHPSYTGGKWNPADSTAVRVFTKQDNSECSQTRRQLQQPPPDHTHGKWVPGARADVATGYWCSPCGRKLASQLVYKRHLASELHARRSIQEIDGLVPPRALSRRQRVLASKRTSTTSSLADSVSAPSSSSTASEEQRHSSQNPRRRRREKEVLTCEMCRARVRRAQLGKHLLSHYHCRVAGAIAAATTTTTRSHEVDDNDTQREQQQHQRFLLENMANIVRQCPFQCAPCRFYCNTEDTFLRHWRSQDHRHVVSKIGGSFVCALCDFWCKDNESVEVHIMEQGHRDAVSMINGSVPMVIRRQRILACSACCKPFRYNVQLRVHARETGHEVDESASDEYQCIMKCSHCEHVARSKLALQRHQLNQHKTEPHPNDLNPYFCSFCSTNFKTKRKAVGHRRTSSHKEKVKSSKKGSCQRVCAHCKETLSNLAEFKRHMFDTHLELCHRCGKCGEKFAIPQDVTTHTRDNRCSRSNVTTADAAAAYACDKCCFNTESESEFMFHQVLHGNPVEIDSAPGAGRKTRDRPKYPCPLCQKLFSKFNLREHLRVHTGERPYSCTHCRATFVRRCDMAGHCNKCSDSAGVEATKDARERKYVCHECGDGFYTKHTLRQHILRHAGKQYKCGLPGCPIILRTANELRRHRELVHESTKEIRPFKCNDCTYAAKTNVQLARHRQIHDTPNEDNPDSHVCSFEGCNFKTNNGSHMKRHFRLHSGTKPYKCRYCTYASNNVENLRKHVLSTKIHVGKTIYQCESCRAGEAFGTNYSKELRAHLLESHPDEYPTPDAAKRYVDDIFQQSATL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -