Basic Information

Insect: Copidosoma floridanum
Gene Symbol: Zfpm1
Assembly: GCA_000648655.2
Location: NW:807993-827844[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.0014 0.061 13.2 0.0 1 23 67 89 67 89 0.98

2 13 0.0011 0.045 13.6 0.1 1 23 113 135 113 135 0.98

3 13 2.9e-06 0.00012 21.7 2.0 1 23 141 164 141 164 0.98

4 13 0.49 21 5.2 0.1 1 19 329 347 329 349 0.86

5 13 0.37 15 5.6 0.1 1 23 510 532 510 532 0.97

6 13 0.00026 0.011 15.5 1.5 1 23 541 563 541 563 0.98

7 13 0.00067 0.028 14.3 4.4 1 23 569 592 569 592 0.97

8 13 0.00049 0.021 14.7 4.1 1 23 1014 1037 1014 1037 0.96

9 13 0.00011 0.0046 16.7 0.1 2 23 1319 1340 1318 1340 0.98

10 13 0.14 5.8 7.0 4.7 1 23 1346 1369 1346 1369 0.96

11 13 0.011 0.44 10.5 2.7 1 23 1458 1482 1458 1482 0.97

12 13 0.019 0.78 9.7 0.4 3 23 1656 1676 1654 1676 0.93

13 13 0.073 3.1 7.9 4.5 1 23 1682 1704 1682 1704 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.0014	0.061	13.2	0.0	1	23	67	89	67	89	0.98
2	13	0.0011	0.045	13.6	0.1	1	23	113	135	113	135	0.98
3	13	2.9e-06	0.00012	21.7	2.0	1	23	141	164	141	164	0.98
4	13	0.49	21	5.2	0.1	1	19	329	347	329	349	0.86
5	13	0.37	15	5.6	0.1	1	23	510	532	510	532	0.97
6	13	0.00026	0.011	15.5	1.5	1	23	541	563	541	563	0.98
7	13	0.00067	0.028	14.3	4.4	1	23	569	592	569	592	0.97
8	13	0.00049	0.021	14.7	4.1	1	23	1014	1037	1014	1037	0.96
9	13	0.00011	0.0046	16.7	0.1	2	23	1319	1340	1318	1340	0.98
10	13	0.14	5.8	7.0	4.7	1	23	1346	1369	1346	1369	0.96
11	13	0.011	0.44	10.5	2.7	1	23	1458	1482	1458	1482	0.97
12	13	0.019	0.78	9.7	0.4	3	23	1656	1676	1654	1676	0.93
13	13	0.073	3.1	7.9	4.5	1	23	1682	1704	1682	1704	0.98

Sequence Information

Coding Sequence: ATGAGTGAGATCTGCGTCGTGGCTCCTTTGCCGAAGATCGGCATGGATTTTTCCATGAAAGTGACTGCAGAGACGGGCCATCCTGATCATCAGCACCAAGACGACGGCGACACCTCCATCGAGAGCCAAGCGGACGTTGCATCAGCGAcgGTTGCCGATCGACAACTGCAGCAGCAGCCAGGGACCCCTGGCGCCAGTTACACCTGTCCAGCCTGCCCGGTCGTCCTGACGAGCCCACGCGAACTGACAAACCACCTGCGAGGCCACAACTCGCCCCGGCACACGGGAGGTGTTGGCACGACCTCGGACGGCGGCAGCGGGGCCGAGGACGCGGATTACGTCTGCGGCGTCTGCCAGAAGCAGCTGAGCTCGGCCAGCTCGCTCGACCGGCACGTGCTCGTCCACTCGGGCGAGAGGCCCTTCCGGTGCGTCCACTGCGACATGTCGTTCACTACCAACGGCAACATGAACCGGCACGTGAGAACGGCCCACGGCTCCTTGTCCCCCGGCTGCCACAGTTGGACCGACTCCGAGGGCGGAAGAGCCGGCGGCAACGCCCACAGCGACGACAGCGGCAACGAGAGGCCCCCGTTCAACGGCAGTTCCTCGTCGACGAGCGTCATGGACGCGTACAATAACAACGAGACCAAGGAACGGCTCAGCAAGCGCAAGCGCTACGACAATTACGAGGAGCCAAGGGAACGGGCTCGCCCTCGGGATACCATAGAGGTCGACGATgacgaggaggaggatgaggaggaggaggatgatgGGCTGGACCGGACACCGAGTAGCGGTAAACGCAAGCTGCACTCGTACTACAATGGGCCTGATGCTCCTCTTGGTGCTTCGCCGTCATGCAACACGGTCGTGGGTTTCGGGGACCTCGTCCACCTGGACATTACCTCGAGAAACTTTCCGGTTATTGCGCGCTATGAGTGCGAGAAGACGCTACACAGGCCGGTCTCCGGCGAACTCGCCAGGTACCTCTGTCCCAAGTGTCCCAGGGCGTTTCCGTGCCAGTCGGCGCTCGACGATCACGTGATCGATTGCCTCGCGTCGACCACGTCACCGGACAAACGGCTCTACGGTGTTCACTGTAGAACTCCGACTGCCACGGCAGCTACTACCGCCCACAACAACGGCTACGGTAACATCGCTGCTACCGGGCAGGAGGACTTTTTCGCCATGCTGAACTTGCAAAACAAGTCCGCGAACGCGGCTACGGGTACGGTTGGCGTTGCTgagagcaacaacaacaacaagaacaacaacaacaattgcCAAGGAGAGCTGGCCGACATCCAGAGCATACTGAACGTGACGGCGCACACCTCGAGTATGCTGCAGCTGCGCGCAAAAGCCGGGACGCCCGACAATTGTCCGGTGAGGCAGCGAGGATCGTCCCAGGCTTCGGGCTCCTCGGGCTCGTCAAGCACGCCCCAATCCAACAACGACCATGGCAACGAGGAGGAGGATCAGGACGTCTTTGCCGCCGAGTTTCGCAAAATGAAGCTCAAGGGTGAGTTTCCCTGCCGGCTGTGCAACAGTATATACCCGAATTTGCGGGCCCTCAAGGGCCACAGCCGAATTCACGTCAACACGATACCCGGCAAGCCGTTCCCGTGCAACATATGCACGTACGATTGCGTCGACAAGAACGCCCTGATGAAGCACATGAAGTCTCACAACGGACCGAGACCGTATCAGTGCTCGATGTGCAACTACTCGTTCACGACAAAGGCCAATTGCGAGAGGCACGTGAGGAACAGGCATGGCAAGTTGAACCGCGAGGAGGTCAAGAGCGTGCTCATCTACCACCCGAGCGAGGACTCGGCCAACGACCAGGTCGACTCGATGACTACGACCTCTTACTCGCCTCGCGCGGCAGACGCTGTTCCCCGGGACGAGGTGCGCAAGGTCCTCGAGTACCAAAACGACGTTCGCGATCAGCCGCAACAGATCCAACAGCCAGTGCTGATGACGGGGGTGCAGCTGTCGCAGCGTCAGCCCTCTGTCGTGCACCTGCAACACGAGAGCCGGTACAGTGGCGTTGACGTCTTTCAAAGGCCACCGAGCATACATCGGCCCTTTGAGCTTACCTATAGAGTCGATGAGCTGTTGCAGCGCCAAAATAACCAGCCGAACGACGCCGatgtcgacgacgacgaggacaaTGACAACGGCGATAACGACGACGAAGAAGACGACGATGCGTATGCTACGGATTCGGACGGCAGTTCTTCATCTCTAGTCAACCAAGCGAGCAAACGCGACTCTGGGAGCTCTCCGCTGCTCGAGAACATCTCCGCCGAGCCCCTCGACCTTACGGTAGATCTTACCGTCTTGGATCTTAGCAAAAAGAGCTCCTCTAACTTGACCAAGTGGCAGAAAGATTGCACCGACAGCAGCAACAACACTAGCGTTAAAATCGAAGACAACAACAACACCACTACCGTGAGCGTCAAGCAGCGGCAACAGCAGCAGCGCCACGAGGACAACATTTACAACTCTcagaaacagcagcagcagcaggagaTGCTGCTCGCCCAGGCGTACATGAAGGCAAACCAGATGACGGCCCAGCCGGCCATGCTCGAGAGCCTCTACCCGGGAGCGCAGCTGACCTACCCGAGCACTTTTGCTGGCTTTCCAAACGCTGGTAGCCTCCTGCAGCCGTTTGGGGGGCTCTTTAACCCCCATCACCACCAGCTGTTTGCCGGCAACACACCGGACATGACGATCAACGGACCCCTCTACAAGGAGCTAGTGCGTGGCTTACGTACCAGCGGGGGTAGCCTCGTCGAGGCCCCGGCCACGAGCAGCAGCGGCAGCTATCCACCCTCTTCGGTGAACCAAGCGACAACTGTAACTGTCGTTCCATCGGCCGGTCCGAGTCCCACGGGTAGTAACAGCAGCAAGTCCACCATGACCAATTGCAAGGCATCGACCGCCTCAATGGCCACGACGAAGCTGATCATGAAGAACGGAGTACTCATGCAGAAGCAAAAACAGCGACGTTACCGTACAGAGCGGCCATTTAGGTGCGAACACTGCGGACATGGGTTCACGTTGCGCAGCAACATGGAGCGACACGTCAAGCAGCAACACCCCCAGTACTGGTCCCAAAAGCCAAGAGGCACAAACTCGACTCGCGGCAGACCACCGGCGAGTCACCAACGCCACCCGCCCACTCTGCTGCAGAGCTTGAAGCAGCCGGCTCCGCGGCAACTGTACCAGCCGTACCCAACCGTTGCCCATCAGATAGAGCAGGCGTCGGATAGCCTGGACGTCCTGGAGAGACATTCGACCATTTCCGAGCAAGTAAAATTTGCCATCCTCGCGCAGCATCAAAAGGCCCACAGTAACGCCATAAAGGCCGGGGAAAACGACACCACTGAGCAACAGCTCGTGATCGACGAAGAACACGCAAACGATCTGCGCACGAGCAGCAAAGCCATGAGTCTACTTAGAGACAAGCTCGAAGCCAGGTTCGAGCCCCATGAGAAACAGATCAACAACAGCTGTATCAAGCAGGAGAATCGACAAGAAAAGCCTGAAGATAATGATGTGGACGGCGACAACGAGGGGGACGAAGAGGAGGACGAGGACGAAGTCGGCGAGGTCGGAAATTGCGCCAAGCGACAAGTCATAGATCCGATGACGATCGTCAAGACGGAAATCCAGGCGGTCGCTTGCAAGAATGAGAACGGGAGTAGCGAAGGCAACGAGGATCTGTCTAGTATCTCCGTGATGCTGAACAATGCGTCCCACAATTACCAGCAGAACTTTCACGCGCAATACATGAGCGAGGAGGAGGGCCTCGTCGCCCCGCTCAGCGACCACTCGGGCAGCGACTCGGTCAACTCGCTTACAGCCACGCCTACcttcaagaagaagaagatgaagaagaagaagaagaaatccGCCTACTCGCTGGCCCCGAACCGAGTCAAGTGCCCGTACTGTCAGAGACCCTTCCCCTGGGCCTCCTCTCTGAATCGTCATATTCTGACACACACCGGACAGAAGCCCTACGAGTGCCGCTTCTGTCCCCTGTTCTTCACTACCAAATCCAACTGTGACCGCCACCTGCTTAGGAAACACAAGAAGCAGGCCACCGAGACTGGGCTCACGCGGGCGGCCAGCGTCTCGTCGCCCGAGCTGCCGCAGGAATCTTCACCCCCCGTTGACGGCGCTGCTACCAACAACGAACtcaccaacaacaacagcagtcaACAATCCAGTCAACAAGAACAGGTTGTTGTCGTCAACGGAGCCAACGCGTGCGTTACAGCCGCAACCGCAGTTGCCGCCGTTGCTACAATCAACAACAGCCAGTTCGCCATGAGGAACGTACCCGAGCGGCCCTACAAATGCAAAAAGTGTCCCAGTTCGACCTTCTCGACCTTGGACAACCTCATGAAGCACAAATCGACGAAGCACGCGGCCAACTCGGCGACAAATTCTGGCTCAGAATCGGCAGTATCGACCGAGCCCCAGCACAGCCCTCAGGACTGCTCTTCATCGCAGAAGAGCCAGCAGCAACAGGACTCGTGCTGCGATGAACTCAAAAACAATCAGAGCGGCTCCGAGAGCCAATCGTCCGGCGTCTCGGAGACAGCGATCACagtcaacaacaacaacaacaacaacgagatCAACAGCATTTCAGCAACAAAGTCCGCTGTTCCCACCAAAAAGACGTCGCCAAGAGCGTCACCGGGTCTGCCGACCAGCGAGACGCCCTTCAAGTGCCACGTATACATGTGCGACAGCGGTTTCGCCGACAGACAGGACTGCCTCGACCATCTAAAAAACTGTCACGAGGAGGCGTACACTAGGCTCGTCGACAGGGGCGCTCTCGAAAAGGATTACGACGGCAACGACCAGAGCGACGTCGAGGAGACCGCCAGTGCCACAAGACGCGTGCGAGTCGCCGATTACGCCAATAGAAAAGTGATATGCGCCTTCTGCATGCGGCGCTTCTGGTCGGCCGAGGATCTGCGCCGTCACATGAGGACCCATACGGGCGAGCGCCCGTACTTCTGCGACGTGTGCGCGCAACGCTTCACCCTGAAGCACAGTATGCTGCGCCACCGGAAGAAACATGATTCGCCCGACTCGGCGATGTACGTGGGTACGAGCGGCGACGAGGACAGCGCACCCGTCTCGTCCCAGCCGTCCACGGTAGCGCAGCGCCCGTGCCATCAGCAAGTGATCAATTCGTCGTCGACATCGCTGCCACAGATGGCGGGCGTGGCCATGCTGACCTGCGTCGACGCTAGCGAGAATAACGGCCACAGCGATCTGATCTCGAATCTGCTGGGTATTGGAGGTAACGTGGTTGACAAGGCCCTGCAATTGTCCCCCGACGATGCCGCTAAGCTGCTGGGGATCAAGGCGAATCAGGAATGA
Protein Sequence: MSEICVVAPLPKIGMDFSMKVTAETGHPDHQHQDDGDTSIESQADVASATVADRQLQQQPGTPGASYTCPACPVVLTSPRELTNHLRGHNSPRHTGGVGTTSDGGSGAEDADYVCGVCQKQLSSASSLDRHVLVHSGERPFRCVHCDMSFTTNGNMNRHVRTAHGSLSPGCHSWTDSEGGRAGGNAHSDDSGNERPPFNGSSSSTSVMDAYNNNETKERLSKRKRYDNYEEPRERARPRDTIEVDDDEEEDEEEEDDGLDRTPSSGKRKLHSYYNGPDAPLGASPSCNTVVGFGDLVHLDITSRNFPVIARYECEKTLHRPVSGELARYLCPKCPRAFPCQSALDDHVIDCLASTTSPDKRLYGVHCRTPTATAATTAHNNGYGNIAATGQEDFFAMLNLQNKSANAATGTVGVAESNNNNKNNNNNCQGELADIQSILNVTAHTSSMLQLRAKAGTPDNCPVRQRGSSQASGSSGSSSTPQSNNDHGNEEEDQDVFAAEFRKMKLKGEFPCRLCNSIYPNLRALKGHSRIHVNTIPGKPFPCNICTYDCVDKNALMKHMKSHNGPRPYQCSMCNYSFTTKANCERHVRNRHGKLNREEVKSVLIYHPSEDSANDQVDSMTTTSYSPRAADAVPRDEVRKVLEYQNDVRDQPQQIQQPVLMTGVQLSQRQPSVVHLQHESRYSGVDVFQRPPSIHRPFELTYRVDELLQRQNNQPNDADVDDDEDNDNGDNDDEEDDDAYATDSDGSSSSLVNQASKRDSGSSPLLENISAEPLDLTVDLTVLDLSKKSSSNLTKWQKDCTDSSNNTSVKIEDNNNTTTVSVKQRQQQQRHEDNIYNSQKQQQQQEMLLAQAYMKANQMTAQPAMLESLYPGAQLTYPSTFAGFPNAGSLLQPFGGLFNPHHHQLFAGNTPDMTINGPLYKELVRGLRTSGGSLVEAPATSSSGSYPPSSVNQATTVTVVPSAGPSPTGSNSSKSTMTNCKASTASMATTKLIMKNGVLMQKQKQRRYRTERPFRCEHCGHGFTLRSNMERHVKQQHPQYWSQKPRGTNSTRGRPPASHQRHPPTLLQSLKQPAPRQLYQPYPTVAHQIEQASDSLDVLERHSTISEQVKFAILAQHQKAHSNAIKAGENDTTEQQLVIDEEHANDLRTSSKAMSLLRDKLEARFEPHEKQINNSCIKQENRQEKPEDNDVDGDNEGDEEEDEDEVGEVGNCAKRQVIDPMTIVKTEIQAVACKNENGSSEGNEDLSSISVMLNNASHNYQQNFHAQYMSEEEGLVAPLSDHSGSDSVNSLTATPTFKKKKMKKKKKKSAYSLAPNRVKCPYCQRPFPWASSLNRHILTHTGQKPYECRFCPLFFTTKSNCDRHLLRKHKKQATETGLTRAASVSSPELPQESSPPVDGAATNNELTNNNSSQQSSQQEQVVVVNGANACVTAATAVAAVATINNSQFAMRNVPERPYKCKKCPSSTFSTLDNLMKHKSTKHAANSATNSGSESAVSTEPQHSPQDCSSSQKSQQQQDSCCDELKNNQSGSESQSSGVSETAITVNNNNNNNEINSISATKSAVPTKKTSPRASPGLPTSETPFKCHVYMCDSGFADRQDCLDHLKNCHEEAYTRLVDRGALEKDYDGNDQSDVEETASATRRVRVADYANRKVICAFCMRRFWSAEDLRRHMRTHTGERPYFCDVCAQRFTLKHSMLRHRKKHDSPDSAMYVGTSGDEDSAPVSSQPSTVAQRPCHQQVINSSSTSLPQMAGVAMLTCVDASENNGHSDLISNLLGIGGNVVDKALQLSPDDAAKLLGIKANQE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -