Basic Information

Insect: Copidosoma floridanum
Gene Symbol: ZNF341
Assembly: GCA_000648655.2
Location: NW:1079341-1083200[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.031 1.3 9.0 4.1 1 23 71 93 71 93 0.98

2 13 0.00063 0.026 14.4 6.0 1 23 251 273 251 273 0.99

3 13 3.1e-07 1.3e-05 24.8 0.4 1 23 279 301 279 301 0.98

4 13 0.0031 0.13 12.2 1.9 1 23 326 349 326 349 0.96

5 13 0.026 1.1 9.3 0.2 1 23 355 379 355 379 0.98

6 13 0.0002 0.0086 15.9 1.4 1 23 384 406 384 406 0.98

7 13 0.0065 0.27 11.2 3.9 1 23 418 442 418 442 0.91

8 13 0.0017 0.07 13.0 1.9 3 23 446 466 444 466 0.98

9 13 7.9e-06 0.00033 20.3 0.2 1 23 472 494 472 494 0.96

10 13 5.4e-05 0.0023 17.7 3.1 1 23 500 522 500 522 0.97

11 13 0.013 0.56 10.2 0.4 5 23 537 555 528 555 0.79

12 13 0.0065 0.27 11.2 5.8 1 23 561 584 561 584 0.92

13 13 0.0078 0.33 10.9 0.8 2 19 587 604 586 607 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.031	1.3	9.0	4.1	1	23	71	93	71	93	0.98
2	13	0.00063	0.026	14.4	6.0	1	23	251	273	251	273	0.99
3	13	3.1e-07	1.3e-05	24.8	0.4	1	23	279	301	279	301	0.98
4	13	0.0031	0.13	12.2	1.9	1	23	326	349	326	349	0.96
5	13	0.026	1.1	9.3	0.2	1	23	355	379	355	379	0.98
6	13	0.0002	0.0086	15.9	1.4	1	23	384	406	384	406	0.98
7	13	0.0065	0.27	11.2	3.9	1	23	418	442	418	442	0.91
8	13	0.0017	0.07	13.0	1.9	3	23	446	466	444	466	0.98
9	13	7.9e-06	0.00033	20.3	0.2	1	23	472	494	472	494	0.96
10	13	5.4e-05	0.0023	17.7	3.1	1	23	500	522	500	522	0.97
11	13	0.013	0.56	10.2	0.4	5	23	537	555	528	555	0.79
12	13	0.0065	0.27	11.2	5.8	1	23	561	584	561	584	0.92
13	13	0.0078	0.33	10.9	0.8	2	19	587	604	586	607	0.94

Sequence Information

Coding Sequence: ATGTCGCAGTCGATTTTTGACGCGCTGTCCGGAGTCTCTCTAGACAGCTCGAGCGTGCAGTCCCTTTTGGAGTCTCAGACCTTGATAAATGAAGTTGAGCATTCAGGTATGCATTATTTACATCTTTGTTGGAAGTATTGGTTAACTGCCCAGGTTTTTGTAatgaataatctttttttttcagcattcgATCAAGATGAGGAGGATATATTCCAGTGTGGAAAGTGCAAAACACAATTCAACTCTCTGCACATGTTTGTTCTGCACAAGCGAGAGCACACAAGTACAAAGCTTCAAGAGCAGACCGTTGACTTGAGTCAGTATCTGGTCAGCAATGACAGCCCTATTGTTCAGACTGATGACAACTGTCAGGATGCTACCGATTATGATGATTTTGACTCGAGCCATGAGCTTGGTGACTCCATTATTTTACAGgagaatgatattttatttagCATGGATGGTGCCAGTTACTTAACTTCCGATTCGAGCTTTAGTGTACCAATAATTTTAAGCACCGATGATCTAGAATCTTTCGACAACACGTCTATTATAGCAGGAACTGATGATAATCTCTTAAATGAAGAAGTCAGTGAGATGCAAGCTTTAGAAAATGACATTAAACATAATCAGAGCTTAGACGACGATAGCAATGGTCAAGAAGCAATAAGTCTAGGTTCCCCAAAGGATGTTAAACCAGCTGAAGACATCAAAAAAGAGAGTCAGTTGGGTCAAATACAGAAttttaagtacaagtGCAGCTACTGTCACAAGCAATTTGCCAAAAAGTTTTATTGGCAGCAACATGAAAGATCTCATACAGGCGAAAAGCCATATCAATGTGTAGTCTGTGGTCGTCCCTTTGCTCAAAAGTCCAACGTAAAAAAACACATGTCATCGCATAAAGTATGGCCAGGCACGGCGATTCATTCACTACCACCAGAAGCACCGGTCGACGGCAGCATCGAGCGTTCATACCATTGCCAATTTTGTAAAGAGATCTTCGATTCATACAAGGCGCTCAAAAATCATCTGATCGTTTCACACCTCACTCTCAAAGTATACAAATGCGTTCAATACGGCTGTGGCTCCATGTTTGCCGAATTAGACGACTTCCTTGAGCACACTCGCAGCCACAAGCGTTCCGAGTACCGCTGTCACGTGTGTGGTGACACTTTTAACACTTTGTCTGATCTCGGCCTCCACCAATACACGCACTCCGTCCAAAAGCAAAAAACCACTGAGAAGTACTATTGTTGCTCGGTGTGTAAATCATCCTTTTCCAATCTTGAAGCGCTACAGCATCACACAGAGACGACGACCCATGATTACGGGTGTCCCCATTGCGGCAAGAGTTTCTTGATCGAGAGGTTTTTACGTCGGCATCTTAAAACTCATACGTCTTTTGCACGCTTTGCTTGTGAGGACTGTGGCAAAGCTTTTAAAACTGAGCAATACCTTGCCAATCACAAACTTATTCATAGTGACGAGACGCCCTTCCACTGCCCACATTGTCCAGCACGTTTTAAGCGGAAAGACCGACTAGGTCGGCACATGCTCATCCACGATCTAAGCAAACGGCTCAAGTGTCCGTTCCGCTCCTATCTTGGGTGCATGAGCGAGTTCTCAAGACCGGACAAACTCAAGCGCCATTTGCTCACCCACAATAACGTTAAGCGATTTAGTTGTAACATATGCAACCGGCACTTTCACCGAGCTCAGGCGCTCAAGCATCACGAGATCAACAAGCACAGTCTGAAATGTGACGTGTGCTCGCATATATTTAGATCTAAAGAGCAACTTGTGAGTCATAATTGCGAGCAGTCCAGTGAACTGAGGAAGCACACAAGTTCTCAGCTACCAAAGAAAGCCTCTGGTACCTTCAAACCGCGAAGACCAACTCCAAAAAGACAACTTTCTTCTAAAACTAGTTCTACTACATCAAGTCCTTGTGATAAAGAGAAGATCAAGGCTGAGGATGTACAAATGCAGAACATTGTTACGGTGGAGACTTTAATAGTCAATCATCAAGAAAACGATTTTGATGCAAAGATAGAAAATTTGGATCTTGATCTCGATCTCAGCAGTGAGATTCCATTAAGAATAGATCCTCTGAGAATTGATCCTCTAAGGAGtgattaa
Protein Sequence: MSQSIFDALSGVSLDSSSVQSLLESQTLINEVEHSGMHYLHLCWKYWLTAQVFVMNNLFFSAFDQDEEDIFQCGKCKTQFNSLHMFVLHKREHTSTKLQEQTVDLSQYLVSNDSPIVQTDDNCQDATDYDDFDSSHELGDSIILQENDILFSMDGASYLTSDSSFSVPIILSTDDLESFDNTSIIAGTDDNLLNEEVSEMQALENDIKHNQSLDDDSNGQEAISLGSPKDVKPAEDIKKESQLGQIQNFKYKCSYCHKQFAKKFYWQQHERSHTGEKPYQCVVCGRPFAQKSNVKKHMSSHKVWPGTAIHSLPPEAPVDGSIERSYHCQFCKEIFDSYKALKNHLIVSHLTLKVYKCVQYGCGSMFAELDDFLEHTRSHKRSEYRCHVCGDTFNTLSDLGLHQYTHSVQKQKTTEKYYCCSVCKSSFSNLEALQHHTETTTHDYGCPHCGKSFLIERFLRRHLKTHTSFARFACEDCGKAFKTEQYLANHKLIHSDETPFHCPHCPARFKRKDRLGRHMLIHDLSKRLKCPFRSYLGCMSEFSRPDKLKRHLLTHNNVKRFSCNICNRHFHRAQALKHHEINKHSLKCDVCSHIFRSKEQLVSHNCEQSSELRKHTSSQLPKKASGTFKPRRPTPKRQLSSKTSSTTSSPCDKEKIKAEDVQMQNIVTVETLIVNHQENDFDAKIENLDLDLDLSSEIPLRIDPLRIDPLRSD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00368279;
90% Identity: iTF_00368279;
80% Identity: -