Basic Information

Insect: Copidosoma floridanum
Gene Symbol: ZNF236
Assembly: GCA_000648655.2
Location: NW:1071702-1093216[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 27 5.1e-05 0.0022 17.8 3.1 1 23 9 31 9 31 0.96

2 27 0.00023 0.0096 15.7 1.7 1 23 37 59 37 59 0.97

3 27 1.3e-06 5.4e-05 22.8 0.1 2 23 65 86 65 86 0.98

4 27 0.00016 0.0067 16.2 0.3 2 23 93 114 92 114 0.95

5 27 0.00031 0.013 15.3 1.2 2 23 125 146 124 146 0.97

6 27 5.4e-07 2.2e-05 24.0 0.2 1 23 167 189 167 189 0.99

7 27 0.00072 0.03 14.2 0.3 1 20 195 214 195 217 0.96

8 27 3.1e-05 0.0013 18.5 1.6 1 23 223 246 223 246 0.96

9 27 0.0036 0.15 12.0 2.2 1 23 257 280 257 280 0.98

10 27 3.1e-07 1.3e-05 24.8 1.8 1 23 375 397 375 397 0.99

11 27 0.00027 0.011 15.5 4.2 1 23 403 425 403 425 0.98

12 27 0.26 11 6.1 0.5 2 23 432 454 431 454 0.93

13 27 0.12 5 7.2 1.9 1 23 454 476 454 476 0.92

14 27 0.012 0.49 10.4 4.4 1 23 537 559 537 559 0.98

15 27 5.4e-06 0.00023 20.8 0.9 1 23 565 587 565 587 0.98

16 27 0.0051 0.21 11.5 4.8 1 23 593 615 593 615 0.98

17 27 0.00017 0.0072 16.1 3.6 2 23 622 643 621 643 0.97

18 27 0.0062 0.26 11.2 0.5 2 23 931 952 930 952 0.97

19 27 0.53 22 5.1 0.7 1 23 958 980 958 980 0.97

20 27 0.0015 0.064 13.1 2.1 1 23 986 1008 986 1008 0.97

21 27 3.4e-07 1.4e-05 24.6 0.8 2 23 1045 1066 1045 1066 0.98

22 27 0.0019 0.079 12.9 5.0 1 23 1072 1094 1072 1094 0.98

23 27 0.0004 0.017 15.0 1.6 1 23 1100 1122 1100 1122 0.97

24 27 0.00064 0.027 14.3 3.6 1 23 1128 1150 1128 1150 0.98

25 27 5.2e-06 0.00022 20.9 2.2 2 23 1382 1403 1382 1403 0.98

26 27 3.3e-05 0.0014 18.4 2.2 1 23 1409 1431 1409 1431 0.98

27 27 3.4e-05 0.0014 18.3 3.4 1 23 1437 1460 1437 1460 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	27	5.1e-05	0.0022	17.8	3.1	1	23	9	31	9	31	0.96
2	27	0.00023	0.0096	15.7	1.7	1	23	37	59	37	59	0.97
3	27	1.3e-06	5.4e-05	22.8	0.1	2	23	65	86	65	86	0.98
4	27	0.00016	0.0067	16.2	0.3	2	23	93	114	92	114	0.95
5	27	0.00031	0.013	15.3	1.2	2	23	125	146	124	146	0.97
6	27	5.4e-07	2.2e-05	24.0	0.2	1	23	167	189	167	189	0.99
7	27	0.00072	0.03	14.2	0.3	1	20	195	214	195	217	0.96
8	27	3.1e-05	0.0013	18.5	1.6	1	23	223	246	223	246	0.96
9	27	0.0036	0.15	12.0	2.2	1	23	257	280	257	280	0.98
10	27	3.1e-07	1.3e-05	24.8	1.8	1	23	375	397	375	397	0.99
11	27	0.00027	0.011	15.5	4.2	1	23	403	425	403	425	0.98
12	27	0.26	11	6.1	0.5	2	23	432	454	431	454	0.93
13	27	0.12	5	7.2	1.9	1	23	454	476	454	476	0.92
14	27	0.012	0.49	10.4	4.4	1	23	537	559	537	559	0.98
15	27	5.4e-06	0.00023	20.8	0.9	1	23	565	587	565	587	0.98
16	27	0.0051	0.21	11.5	4.8	1	23	593	615	593	615	0.98
17	27	0.00017	0.0072	16.1	3.6	2	23	622	643	621	643	0.97
18	27	0.0062	0.26	11.2	0.5	2	23	931	952	930	952	0.97
19	27	0.53	22	5.1	0.7	1	23	958	980	958	980	0.97
20	27	0.0015	0.064	13.1	2.1	1	23	986	1008	986	1008	0.97
21	27	3.4e-07	1.4e-05	24.6	0.8	2	23	1045	1066	1045	1066	0.98
22	27	0.0019	0.079	12.9	5.0	1	23	1072	1094	1072	1094	0.98
23	27	0.0004	0.017	15.0	1.6	1	23	1100	1122	1100	1122	0.97
24	27	0.00064	0.027	14.3	3.6	1	23	1128	1150	1128	1150	0.98
25	27	5.2e-06	0.00022	20.9	2.2	2	23	1382	1403	1382	1403	0.98
26	27	3.3e-05	0.0014	18.4	2.2	1	23	1409	1431	1409	1431	0.98
27	27	3.4e-05	0.0014	18.3	3.4	1	23	1437	1460	1437	1460	0.97

Sequence Information

Coding Sequence: ATGAGGTCCCTGATGAAACCGTGTTTTAAGTGTGACGTGTGTGGCCAAGAGTTCAAAAAGCAGTACCTACTGCGAAAACACCTGCATGACCATGCAAAAAACAAACCTCACCATTGTCCAAAATGCCCCGCAACATTTAACGTACCAACAAACTTCACCCTGCACATGGCGACGCACAACGCCGGCGAGCCCAAGTGCCCCGAGTGCGGCAAAAAGTTCGCCCGAGTAGCTAGCTTGAAGGCGCACATGCTCATACACCAGATGGACGAGAGCCTCTACTGCACCGAGTGCGACGACACCTTCGCGACCAAgAGCCAGCTCGAGGCCCACCAGAGCTTGCACGACGAAAAATGGCCCGGCAACGCTTGCAAGCGCTGCCGGGTCTGCGGCAAACAGTTCACCAAGCCCGTCCTCTATCGCCAGCACCTCCGCGACCACTACAAGCTGAAAGTCAAGTGCTCGAAGCAGACGAAGCGCGGGGTTCGGCAACGCACGGCTTACAAGTGCAAGGTGTGCGCCAAGGTGTTCGAGAAGCCGAGCCAGCTAGCCCGGCACATCAGGGTCCACACGGGGGAGAAACCCTACAAGTGCAACGTCTGCAATCGAGGCTTCACGCAGGAGGGCTCCGTGAGGATCCACATGTGGCAGCACAAGAACGTCAAGCCCTACAGCTGCACCCTCTGCCACGCCAGTTTCCGGCAAAAAGGTAATTTGAATTCCCACGTGCTGCGGGTGCACGAGCTGAAGGAGGAGGGTGGCAGGCCGTTGTACCGGTGCTCGCGGTGCCCCTGCGCGTTCAAGAAGCTGGGCAGCCTGAGCAGTCACGTGAAGCGGGTCCACGGCGGTGACGGGAGCAACCTCGCCACGGAGGAggacgacgacggcgacgagAACGAGGAGGCCATGCGGGCCAAGGTCGACCGGGTCATCGATGGGCTGGCCGATCTCGAGTCGTGCGTCGCCGATGCGAGACTCGCTGGGCTGGAATCGGGAAAGGAGGGCTTCGTCGTCACCGACGACAAGGAGACCACGGCCCTCGTCACGATCTTTGACAAGGAGAGCGACGGTTTGAACGGCAAGTACGTGAAACTGAAGCAGCGATTGGTCAACAACGCCAAGTTCTACGAGTGCACGTTTTGCCAGAAAACTTTCAAAAAGCCGTCCGATCTCATGAGGCACTTGAGGATACACACCAAGGAAAAGCCTCACAAGTGCAAAATATGCGACAGATCGTTCACGTTGAAGGCAACGCTGCTGCACCACGCGAGCACCCACAACGGGACGGACAAAGTACCGTGCGCCATGTGCAACATGACACTGGACTCGAGAAGGGCTTTTGAAAACCACATGGACAACTGCCACAGGTGTACCAAGTGCGACAAGCGATACGAGAGCATGGAGGAGCAAAACAGCCACAAGGAAGCGCACATCGGTGACCTCCCGAGCATGGAGAGGCCAACGTCGAAGAAACAAGTGTCCGCCGAGGTGCAAAGCCTGGCGGATAAGGTTGTGCTGAAGGAGCCACTGGTGCTCACGGAAACGGGCAATGGGCAAGTCCAAGCCAAGCCTCGGTATCGCGACGACATCGCCCGCGGCAAGGGCAGGCCGCACAAGTGCCCGTCGTGCCCCGCCGCCTTCATGAAAGTCAGTCATTTCAAGCAACACTACCGCAAACACACGGGCGAACGGCCCTTCTCCTGTGACACCTGCAACAGcGCCTTCTCGACAAAAAGCACCCTCAAGGCTCACCTCCGCGTCCACGACCGCTCGAGGCCCTACTCGTGCTGCATTTGCAACAATAAATTTACGACTCTGAGCGGCATGAGGAGGCACTACACGACGCACGACAACAAACGCTCCATCATGTGTCCCTACTGCAACAAGACCTTCAAATCGTCGGTCACTTGCAAGAAACACATGAAGGTGCACAAACAAGAAGTCGCCCAGCAGCAACTGGAGCTTCAGAAAACACAACAAAAGCCCGATCCAAGTGCTACTGGCGCCACGAACAAACCGGTCATCATCAGCGACGAAAGAGTTGTACTGCCTTTCGCCATTGCGTCGTCCTTGCACTCGAACAATCCAACAACTGCCTCCAACGATCGAAGCGCGGACAACTTGCAGTTTTCCGTCACCTCGTCTTCGCCGAGTATCCAATCGTTAGCGCAGAACATGCCCGCGGTGGATGGCACCGACGCGAGCTTGGTCCAAACTTTGCAGGCGCAAGACAACAGCTCGATGATCCTGTCCAACTACGACGGCAGCCAATCTATTTCCCCTGAGAGCATCCGAGAGATCGAAGAAAAGCTGAACCAGCAGTTGTTCGGTCTCGGGGTGAACTTGTCACTGGGCAACGTCGTCAAGCACCTTGATCCGCAAAACGATGCAAACGTGGAGTCGCGCGAGCAGCCGATGTTGAGTATCATTTACGAAAACGGGACCACGTTGCATTCGCCGGTCACTGTCAGCGCATCCGTCAATCCCAGCGCGTTCAACCCTCAGTACGGCAATATCGACATCAGTCAAATAGCGTTGCAGAACAACAACGCGATGAACATCGGCATCGTGCAAGCTGATTCCACCAACGTGATAAACATCCTGTCCAACGTCATACAAGAGAGTGAACCGTGTCCCCAGCCGATGATCGACGACGGCGTTGATTTGAATTTCGTCATCCATGAAAACGCAACGAGTGAGATCGATCGAGTGGTCGACGACCCTTCGATCTTCGACATGAAGGATGGTGTTGATCCACAGGGCGGCGACGGTTCGAACAAAGGAGACAGTTTACAGTGCCATATTTGCGACAGACAAGGGTTCAGCGCCAAAGATTTGGAAGACCACTTGGAAACCCATCAAGGGAAGAACGAGTTCCAATGCTCGGTTTGTCTCACGAAATTATTGTCCGAAAGGGATCTCAATCGGCACGCGAAGACGCACGAGATTCaagaAACTCACAAATGTTACGAGTGTAACCAGGAATTCAACACGAGCTTACTGTTGAGGGACCACATCAAGGAGCATGTGAAAAAAGAGTTGAAACTGAAAGACCCGGAAAATGCAGAGACAATCATTACCGAACTCGAATCGGAAGCCAAAGTTgACGGTAGCAAGAAAAAGAACAAAGTCAACACGTGCCAATATTGTCCCAAAAGTTTCCGCAAACCAAGCGATCTCGTCAGACACGTGAGGACACACACGGGCGAACGACCCTACGAGTGCCATTTTTGCAACAAAACTTTCGCCGTCAAGTGTACCTTGGACTCGCACCTAAAGATACACAACAGCAAAAAGTCGTTCCACTGCCAAATTTGTGACAATATGTTTGCGACCAAAGGAAGCCTCAAAGTTCACTCGAGACTACACACAGGGTCCAAACCGTTCAAGTGTTCCATGTGCGACATGAAGTTCCGCACCTCAGGCCACCGGAAAGTACACCTCCTGTCTCACACGAAAACTAGAAAATCCTCGACTCGCAAGTCAAAGAGCAAAACCACGGGAGTCTCGCTACTGGCGGCCGAGGTTGAAAAGTTGGCCGAAAAGGATTTGGTCGACAACGCCGTGATGCTCGAAATCGATTCGCTGCAAGACTTTGACCAGCCAACCATTGAGCTTCAGGACAACGACCTCGTGCAGACGCCGGCAATCGAGTCCCAACAAAGTTTCGACGCGATCGATCCAATGGATGACGCCCTGGTGCAGCCAAACATGGGCATCGATCAAAGTCTGAACGACTTGACGATACCAAGCGAAATAACTTTTAGCACGGACTTCCTGGACGGCGACATTTTGACCCTCGGTGAAAACAACCAGTGGGTGGCGAACCTGCAGTATCTATTGACCAACGGGTTGGTCACGATACAGACCCAGGACCCGGAGTTGAATCAAGTGACTCTGACGACGACGTCTACGATACCGGACGGCcttgaaaagacaaaaatccCCGAAGAGACCGAGGTGCCCCAGGTACTCTTCGACATGGAGTCCCCGGACTCGACGGTGCCCAACAACCCGCTGCCAGGTGAGAAAAGCCTCGCCATGAGCGATTACATGGTCCTGCAGTTGGACAGCGTCGACTCGACGGTGCAGATCAGAAACAACGCTGCCAATCCGGACAAATCCCCGGTCAGCGGGGCGAGGCGGGAGTGCGAAATGTGCGGCAAGAGTTTCGCCAAGCCGTGCCAACTCGAGCGCCACAAGCGAACGCACACGGGCGAGCGGCCCTTCAAGTGCGACCAGTGCGCAAAGTCCTTTGGCCAGAAGTCGACGCTGCAGATGCATTACAGGAACCACACCGGGGCCAAACCCCACGAGTGCAGCCAGTGCAACAAATCGTTCGCCCAGAGTGGTAATTTGCACACCCACGTCAAGCGGGTGCACAAGGCCGAGACGAGTCCGCCGAGTCGGGCGACGCAGTACTTTCACTACGATCTGAAACTGCTGGATTCAAGTGTCGAAGACCGCAGATCGCTTGAGCTTGACGACATGTCGTTTGCCGATTTACTGAGCTGA
Protein Sequence: MRSLMKPCFKCDVCGQEFKKQYLLRKHLHDHAKNKPHHCPKCPATFNVPTNFTLHMATHNAGEPKCPECGKKFARVASLKAHMLIHQMDESLYCTECDDTFATKSQLEAHQSLHDEKWPGNACKRCRVCGKQFTKPVLYRQHLRDHYKLKVKCSKQTKRGVRQRTAYKCKVCAKVFEKPSQLARHIRVHTGEKPYKCNVCNRGFTQEGSVRIHMWQHKNVKPYSCTLCHASFRQKGNLNSHVLRVHELKEEGGRPLYRCSRCPCAFKKLGSLSSHVKRVHGGDGSNLATEEDDDGDENEEAMRAKVDRVIDGLADLESCVADARLAGLESGKEGFVVTDDKETTALVTIFDKESDGLNGKYVKLKQRLVNNAKFYECTFCQKTFKKPSDLMRHLRIHTKEKPHKCKICDRSFTLKATLLHHASTHNGTDKVPCAMCNMTLDSRRAFENHMDNCHRCTKCDKRYESMEEQNSHKEAHIGDLPSMERPTSKKQVSAEVQSLADKVVLKEPLVLTETGNGQVQAKPRYRDDIARGKGRPHKCPSCPAAFMKVSHFKQHYRKHTGERPFSCDTCNSAFSTKSTLKAHLRVHDRSRPYSCCICNNKFTTLSGMRRHYTTHDNKRSIMCPYCNKTFKSSVTCKKHMKVHKQEVAQQQLELQKTQQKPDPSATGATNKPVIISDERVVLPFAIASSLHSNNPTTASNDRSADNLQFSVTSSSPSIQSLAQNMPAVDGTDASLVQTLQAQDNSSMILSNYDGSQSISPESIREIEEKLNQQLFGLGVNLSLGNVVKHLDPQNDANVESREQPMLSIIYENGTTLHSPVTVSASVNPSAFNPQYGNIDISQIALQNNNAMNIGIVQADSTNVINILSNVIQESEPCPQPMIDDGVDLNFVIHENATSEIDRVVDDPSIFDMKDGVDPQGGDGSNKGDSLQCHICDRQGFSAKDLEDHLETHQGKNEFQCSVCLTKLLSERDLNRHAKTHEIQETHKCYECNQEFNTSLLLRDHIKEHVKKELKLKDPENAETIITELESEAKVDGSKKKNKVNTCQYCPKSFRKPSDLVRHVRTHTGERPYECHFCNKTFAVKCTLDSHLKIHNSKKSFHCQICDNMFATKGSLKVHSRLHTGSKPFKCSMCDMKFRTSGHRKVHLLSHTKTRKSSTRKSKSKTTGVSLLAAEVEKLAEKDLVDNAVMLEIDSLQDFDQPTIELQDNDLVQTPAIESQQSFDAIDPMDDALVQPNMGIDQSLNDLTIPSEITFSTDFLDGDILTLGENNQWVANLQYLLTNGLVTIQTQDPELNQVTLTTTSTIPDGLEKTKIPEETEVPQVLFDMESPDSTVPNNPLPGEKSLAMSDYMVLQLDSVDSTVQIRNNAANPDKSPVSGARRECEMCGKSFAKPCQLERHKRTHTGERPFKCDQCAKSFGQKSTLQMHYRNHTGAKPHECSQCNKSFAQSGNLHTHVKRVHKAETSPPSRATQYFHYDLKLLDSSVEDRRSLELDDMSFADLLS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -