Cflr006672.1
Basic Information
- Insect
- Copidosoma floridanum
- Gene Symbol
- RCOR3
- Assembly
- GCA_000648655.2
- Location
- NW:1855897-1863106[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 8.7e-10 5.6e-07 29.0 0.0 3 46 128 171 126 171 0.97 2 3 3.5 2.2e+03 -1.8 0.7 37 44 275 282 271 283 0.87 3 3 3.3e-13 2.1e-10 39.9 0.0 3 46 373 416 371 416 0.97
Sequence Information
- Coding Sequence
- ATGGTGCTGGCCGAGAGAAACTCGGAGAACGTGAGAAACGGGCGCAGGTCTCGGGGGCCCAGTCCCAATGGACAAACCGATACCTCCAGCGAGGAGGACGGagttccAGCAGAGAAAATCAGAGTTGGAAGAGATTTCCAGGTCAGCGTTCCAGAATTGATTCCGATTGGAGATCGTAAGCTTGATCTGTGCCCTGAAAAGGCTCTTCTCGTTTGGTCACCAACAACCGACATACCAGAACAAAAACTGGAGGACTACATTTCATTGGCAAAGGAGAAGTACGGTTACAATGGGGAGCAAGCTTTGGGAATGCTGTTCTGGCACAAACACAACCTTGAACGAGCTGAAAGCGATCTTGCAAATTTCACACCTTTCCCAGACGAATGGACGGTGGAggataaagttttgtttgagCAGGCATTTCAGTTTCACGGCAAAAGCTTTCACAGAATACGTCAAATGcttcCAGACAAATCAATTGCAAGTCTGGTCAAATATTACTACAGTTGGAAAAAAACTCGTACTAAAACATCTTTAATGGACAGACAAGCGAGAAAATTAACCACATCTGGCAAAGAGGGAGAAAACGGAAGCGACAACGGCAGCGAGTTGGGTTCATCGGATAGCGATCAAGATGataaaAAATGGACGATCCATCGCGGAATTCGTCGTGGAAAGAACCAGTCCTTGCCAGGAAGCCAAGGCAATGACGCCAAGGCCTTGTCAGACTCGGAAAACGTCCCTCAGGTTCAGGGCTCGTGTAGCAACTGTGGCGTTGCTTGTCATAATGTGCGTGCTACGCCCAAGGGACACGCGTGTCATAGCTGCTATCTGCATTGGAGGCGAACGGGTGTAGCGAGGCCGCTGAGCTCGATGCCGGGTCGTTCGAACAAGCGAAAACCGCCGCGTGGACTGGTCGTCAATCACGACGACTTGGCTGCCCTCGCCGGACAGACGAGTCAGGCCTCCAACGTCCTACAAGCTATTGACACTGAAATCGTTAGCCTCAAGCGACAAATCCAGTCGAACAAGCAGCAGGTGAGCGCCCTTAAGCGAAAAACAAACGATGGCATCGAAGAACTACGGCCGAGCGAGAATGCGAGCCGGATAACGTCGCGTTGGACAAACGACGAGCTCCTGTTGGCCGTCCAGGGGGTGCGCAAGTACGGCAAGGACTTCTCGGCCATAGCTGATGTCATCGGCACCAAGACTGAGGCTCATCTGCGCTCGTTCTTCGTCAATTACCGGCGCAGGTACAACCTCGACGCCGTCCTTAAGGAGTACGAGGCTGAAAATGGGCCCATTCTCATCGAAGACGACAAGGAAGATAAGATGGAAATTGACCAGCCCATGATTACGGAATCAGCAGAGTCTTCGCAAAAAGCAAAATCACCAGTGGTTACGAATCAAACGTCCAAATAA
- Protein Sequence
- MVLAERNSENVRNGRRSRGPSPNGQTDTSSEEDGVPAEKIRVGRDFQVSVPELIPIGDRKLDLCPEKALLVWSPTTDIPEQKLEDYISLAKEKYGYNGEQALGMLFWHKHNLERAESDLANFTPFPDEWTVEDKVLFEQAFQFHGKSFHRIRQMLPDKSIASLVKYYYSWKKTRTKTSLMDRQARKLTTSGKEGENGSDNGSELGSSDSDQDDKKWTIHRGIRRGKNQSLPGSQGNDAKALSDSENVPQVQGSCSNCGVACHNVRATPKGHACHSCYLHWRRTGVARPLSSMPGRSNKRKPPRGLVVNHDDLAALAGQTSQASNVLQAIDTEIVSLKRQIQSNKQQVSALKRKTNDGIEELRPSENASRITSRWTNDELLLAVQGVRKYGKDFSAIADVIGTKTEAHLRSFFVNYRRRYNLDAVLKEYEAENGPILIEDDKEDKMEIDQPMITESAESSQKAKSPVVTNQTSK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00684724;
- 90% Identity
- iTF_00368060;
- 80% Identity
- -