Cflr011355.1
Basic Information
- Insect
- Copidosoma floridanum
- Gene Symbol
- Mblk-1
- Assembly
- GCA_000648655.2
- Location
- NW:1449991-1506104[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.8e-18 9e-15 53.5 0.1 1 45 572 617 572 617 0.96 2 2 1.4e-18 1.6e-15 55.9 0.0 1 43 1101 1144 1101 1146 0.94
Sequence Information
- Coding Sequence
- atggcGGATTGTCCCTATGCCCGCTGCATACAGGAACGGAAACACATACGCCGTGAGCTGCTGCGATGGACAAAGAACATGGTCTTCGTAGTCGGTCTGGAGCGGGTTGCAGAGGAGTTGATGGGCCGTAGGAGATGGAAGCAATACCAGGACACCCtgtacagcagcagcagcagcagcaacaacaacagcggcGGCACAAGTGGCACTCGCAGCAACGACACCACCTTGGCGCCTGCGGCCGCGaaccagcagcaacagctgcAAATCCAACTACAGCAGCTGGCTCAGGTGAAACCAGACGATTCGCCGAGCCAGTCGTTGAAGGCGTGTCTCGCATCGGCAACCAACttccagcaacagcagcagcaacagagAACAGCGGTGGCGGCGGGTGCACAAACCGCTGCCGCCGCTGCGAGCGCCGGCGCGACGACCAACTGCACGACAACGACCCCGACAAGTGGTACCTCGTCCTCGGTCGAGGCTGCTGGCGGTGGCTGCGGCTCGCCGAGGCCGGCCGAGGAGCAGCGCGCGCTGGCCCACCCGGTGGCCGGAGGCCCGGAGAACGGCCGGCTCGTGGAGAACGGCTCGCTCGCCGTGAACGGGCCCAGCTTGCACGAAGCGAACGACGAGCTGGTGCCCCAGCAGCTGCTGCTGCACTTGCAGCAACGCGACCTTGGCTTGACGGGAGCGGGCCACGTTTTCACAAAGGTCAAGTTAGACGCGGACGAGGAGATTGGCAGGAGGGCCGCgccggaggaggaggaggaggtggaagAGCCGGGGGACGAAGTGGAGGCGAGCCAGAGGATCAAAAGGGAGAGGTTGGACGAGAGATTGGGGTTCAGTCCGGCGAGGGAGGACTGCAAGCTCAACGACACGAAAGGGACCAAGGAGATAAAAGAAGAGGCGCCAGTGGTACATGTAACACAAGGCTTGCTGAGAgtaaagaaggaggaggagctACAGGAAACGTGTTCGATCAGGCCATTGTCGACCCCGGTCAGTCACAATCACCATCCCCATCTCGcccagcatcatcatcatcaccaccacaacaacaacaacaacaacagcaacagcagcaacaacaacggcTTGGAACCGCGGAGCGCCTCGACACCACCGAAAAAGGAAATCGCATTCTGCTCACCCACGTTTTTATTGGGTCGACGGCAGAGCCCACCACCCGAAGATTGGAAGCCGCTCGACAAGTGCTACTTCTGCCTCGATGGCAAGCTGCCGCACGACGAGCAGGCGCCacttAGTCCACAAAGCGAGAGCAGCAATAGTTCGCGCTCGGCCGAGTCGCCGATGGCGGTGCAAGTGGACCCGATGGCCGCTTCGGTGGTCGCGGCTGCCCTCAGTGGCACCTACCCGACCCTTTTGCCCCAGTGGTGCTTACCACCCCAGGAACCGCCCCATGTTATCGCAGCCGTTGCCGCAGCAGCCGCCGCTGCCCAGCAGGAGAACGTGGGTGCCGACCAGCCACTCGACCTCTCGGCAAAGCCCAAAAATTCGCAGGTCAGGgACAATAACATATCAATACTCGATCAGCAGAAGATACCGCTACGAATGGCGGCCGCCATCGACCCGAAAACCATATTCAACAGTACGTGTTACCGGGCGAAGCCGCGTGTGGCGGGTGGACAGGTGACGGGCGGCTCAGGAGTGTCAGCAGCGACAGGCGGAGGTGGGCGTCGCACGTACACGGAGGACGAGCTGCAGGCAGCCCTGCGCGACATCCAGAGCGGAAAGCTGGGCACGAGGCGGGCAGCGGTGCTCTATGGCATACCCAGGAGTACCCTACGCAACAAGGTTTACAAGCTGGCGATGGAGCGCGAGCGGGACGCTAGTCTAGCCCAACAgacggctgctgctgctgctgctgttgttgttgtcagCACGACCACCAcgaacagcaacaacagcaacaacaccaccaccaccaccaccaacaatAATAGcaccaccaacaacaacaacaacaacaacaacaacaacacaagTCCAACGATAAACACCGCGACACAATTGGTGACCGAGGTGGTGCAGGCGGCACAGCAGGCCAattgtagtagtagtaataacgGGCCGGCTAGCTGCAGGTCGCTTATGGCCGAGGCGCAGGCCGCCGTCACGACCTCGTCCACCGTAATATCAAATACGATACGACAAAATTCGTCtatgaacaacaacaacaacaacaacaacaacaacaacaacaattttacCAGCACGAGCGCCAATGCTGTTCCGCTGACGCAAGTGGACGAGGTGGACGAGAAAGATCTGTCGGGCGccgaggaggagaaggaggtgGAGAAGGCTCTACTGAAGCCACTGCTATCGCTCGAAGATCTAGTGAGATTTTCCAGCCTCGAAAGTGGTGGTGGCGAGTCACTGAGGGCACTATTGCAACGTGGGGCACACGAGGCAGCTGCCGGTGGTGCCCCCGAATGGACCTCGGCGTTCGAGCACTCCAACATCGGGCCCTACTTACAAAAAATGCTCGCTGCCACTGCACCGTTTAAAGGAATGGTGTCGCAGGACTACAGAATACCAGAGGTCATGCACCGGCTAATGTGCGAGGAAAAAAAGCTGAACAAGGATACGAACATCGTGAATGGCGACCAGGTACAACACCTTCAACACGTCACGCTTCTCCACCGACTCTCTCAGTCGAACCAACAACGAGTCTCGCTGAATAATGACGACTTCAACCCTATGATCGAGGACGATGCAAGCGACAGCGGCCAGGGCCGGCCAATCCTCAAGATTCCGTCCTACAAGCCAGCCAGTAGCagcggcggtggtggtggtggcgcgACGACACCCGGCCCCAGCAAAAACGGACCCGAATCGGCAGCTGCCAGCTTCGCCCAGAGCTTCGTGGCAAACGCCAGTCCCGGTCTTCTCGAGCGTGTCAGTCCCGCCACCGCGTTCTCCGGCACGAGCTCGCCCACCAACTCGCTCGTTGGCAAAGCCATGCCCGTTAACTTCCGCGACGTCATCGCCAAGAGCATCAGCGTCAAGTTCCAGGAgggccagcagcagcagcatacTCCCCTTTCTGGCCCGGGAACGGCCCAGTCACTGATCGTCGAGCCAAGCCCGTATAAGCGCGGTCGCTTCACACCACCCACGCATCAGCAATCGGCTGCTCAACAGGTGTCGACGGGCAACCAGTCGTCGCTCGGTCACAAGGCGTCGGTCCAATCGCAGGACAAGAATCAGAACAAGCAGAGCGCGGGGGGCAAGGGCACGAGACCGAAACGCGGCAAGTATCGCAATTACGACCGAGACAGTCTGGTCGAGGCGGTCAGGGCCGTGCAAAGGGGAGAGATGAGTGTGCATAGGGCAGGCAGCTACTACGGCGTGCCGCATTCGACGCTTGAGTACAAGGTCAAGGAGCGGCATCTCATGAGGCCGAGAAAGAGGGATCAGAAGCAACCGGACGACAAGTCGAAGGAAGGTGGTACGGGCTCGACAGCTCTGCGTACAAGCGGAGGGCCAACGGGAACGAACGCAACCGCGGACAAGAAGGCTCCGGTGACACTGCTCAAACCTCAACAGAAGCCATTTGGTAGCTCGGcggcggcagcagcagcagcagcagccacgGGGGGCATGCCAGTGTCCAATGGCCTCAAAATGCCACCCTTCATGGACGGCATGACCGCCCACTTACCCTTCGCACACCCATTCAACTTTTGGGGTCCTGCTCCTTTTATGCCAGCGCCTTTCATACCCGGTGGGCCCAACGTGCCTCCCGCGGCTATCCTCCAGACCGAGCAGTATTTCGCGTCGCAACGGATGCGAGGTCTTCAGGAACAGCAGCAGCGTAACGCCCGGGATGGCACGCTATCAGAGCAGCCAGGTACATCAAACGCACGGGGTACCTCGTTGATGAAATCACCACGGGACATGAGCGAGAGCGGTAGCCAGTACGAGGGTAACAGTCCAGTCTCAGCAGCGGCGGTGGCTGCAGCGGCAGCAAATGGAAGCTTTCTCGATAACCTAATAAGGTCGAGTCTGGAATCAAGTATGCCGCGCGACCGCACAACCGGTGCGCCACCACAAACCCAACCGGAAAACCTGGGTAGCAAAGTCCTAATAGACCAGCTGTGCAGAAACTCGAGGCGGACGCCTTTACCCCGCCTGATGCAACAGGACAGTAGCGAAGACGAGGCGCCGACGAATTATCGAGTACAAACGCCGCAGCAACAGAGGCCGTTGCCAGAGCGACCAGAGCGCGTACCTACCGTTGATCTGAGTCCTTCGCCCTCCGAAAGGGCCAGAGCTACGGATGAGGGTAGCGATCGGGGATTGGCGTCGCCACCGACGCCGCTCTCCCTGTCCAGGCTCAGTGGATCTGGTAGGGATGACGAGACCACCAGAGATTCTAGGAGTAGCCGCGAACGCGAGGTAGTTTCACGATTAGAGACTGTAATGACTTCTGTGGGACACAACGGTGATAGTTAA
- Protein Sequence
- MADCPYARCIQERKHIRRELLRWTKNMVFVVGLERVAEELMGRRRWKQYQDTLYSSSSSSNNNSGGTSGTRSNDTTLAPAAANQQQQLQIQLQQLAQVKPDDSPSQSLKACLASATNFQQQQQQQRTAVAAGAQTAAAAASAGATTNCTTTTPTSGTSSSVEAAGGGCGSPRPAEEQRALAHPVAGGPENGRLVENGSLAVNGPSLHEANDELVPQQLLLHLQQRDLGLTGAGHVFTKVKLDADEEIGRRAAPEEEEEVEEPGDEVEASQRIKRERLDERLGFSPAREDCKLNDTKGTKEIKEEAPVVHVTQGLLRVKKEEELQETCSIRPLSTPVSHNHHPHLAQHHHHHHHNNNNNNSNSSNNNGLEPRSASTPPKKEIAFCSPTFLLGRRQSPPPEDWKPLDKCYFCLDGKLPHDEQAPLSPQSESSNSSRSAESPMAVQVDPMAASVVAAALSGTYPTLLPQWCLPPQEPPHVIAAVAAAAAAAQQENVGADQPLDLSAKPKNSQVRDNNISILDQQKIPLRMAAAIDPKTIFNSTCYRAKPRVAGGQVTGGSGVSAATGGGGRRTYTEDELQAALRDIQSGKLGTRRAAVLYGIPRSTLRNKVYKLAMERERDASLAQQTAAAAAAVVVVSTTTTNSNNSNNTTTTTTNNNSTTNNNNNNNNNNTSPTINTATQLVTEVVQAAQQANCSSSNNGPASCRSLMAEAQAAVTTSSTVISNTIRQNSSMNNNNNNNNNNNNNFTSTSANAVPLTQVDEVDEKDLSGAEEEKEVEKALLKPLLSLEDLVRFSSLESGGGESLRALLQRGAHEAAAGGAPEWTSAFEHSNIGPYLQKMLAATAPFKGMVSQDYRIPEVMHRLMCEEKKLNKDTNIVNGDQVQHLQHVTLLHRLSQSNQQRVSLNNDDFNPMIEDDASDSGQGRPILKIPSYKPASSSGGGGGGATTPGPSKNGPESAAASFAQSFVANASPGLLERVSPATAFSGTSSPTNSLVGKAMPVNFRDVIAKSISVKFQEGQQQQHTPLSGPGTAQSLIVEPSPYKRGRFTPPTHQQSAAQQVSTGNQSSLGHKASVQSQDKNQNKQSAGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKRDQKQPDDKSKEGGTGSTALRTSGGPTGTNATADKKAPVTLLKPQQKPFGSSAAAAAAAAATGGMPVSNGLKMPPFMDGMTAHLPFAHPFNFWGPAPFMPAPFIPGGPNVPPAAILQTEQYFASQRMRGLQEQQQRNARDGTLSEQPGTSNARGTSLMKSPRDMSESGSQYEGNSPVSAAAVAAAAANGSFLDNLIRSSLESSMPRDRTTGAPPQTQPENLGSKVLIDQLCRNSRRTPLPRLMQQDSSEDEAPTNYRVQTPQQQRPLPERPERVPTVDLSPSPSERARATDEGSDRGLASPPTPLSLSRLSGSGRDDETTRDSRSSREREVVSRLETVMTSVGHNGDS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -