Cflr005681.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Copidosoma floridanum
Gene Symbol
ARID5B
Assembly
GCA_000648655.2
Location
NW:804201-1022100[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.5e-24 5.7e-21 74.1 0.0 2 89 362 447 361 447 0.95

Sequence Information

Coding Sequence
ATGGCTCAAAAAGATGAGATCAAATTACTGGGCGGTGCCTGCTTCAGCCATGGGCCCTACACGTTCTATAAGGCGGTGCGGATAGGCGCCAACCGTGTGCTGCGACTGGGAAATTTTTTCCTGACAAAGCTCTGGAGCGACGCTGATCTCGTGAGCATCGGTGAGCTTCAGCTGCTGTGGATCGACAACCGCGGCCCCAACACTCCCTTGGCCTCGCTGAGGCTGTACTTTTTGCCGGAAAACACACCTGATGGACGCAGGGACTCACACGGAGAGGACGAGGTGCTGTCGATAACCGAGAAGGTGGTGGTGCGCGTGCACGATCTGGTGACATGTCTGCCACCGTCGTTGGAATGGTCGTGCGGTCGGGAGGTCTCTTACCCGCCGACCCCGATATCCTCGCGGGACAGCAGTCCCCAGCCGCAGACCCTCTCCGACCCGGGACTCGACTTCTCGGACGTCGAGCGCCACCAGAAGGACCTCGAGACTGCCGCCCTCACGCGCCACCGCGGAAATACCGACAGCAACAACGTCACTCACAAccacagcaacaacaacaacagcagtaacccaaacaacaacaacaacaacaacagctcgacaaaaaataacaacaacaacaacaacaacaacaacagcaacgaGAATTGCGCGGCGCCGGGGCAGACGAAGGTGGTGGTGCTCTCGTACCCGAGGTACTGTCGCTACAGGGCCCTGCTGAGGAGGCTGGATGGCGCGGAGCCCAACTGGCTGTGCTCGTCCATAGCGGCGGCCTTGGGTGGCTTCACCGCACATCCCGGCACGCGGGTGCTCTTCTGCCGGGACACCTTTGACTATCCCGATCTGGAGACTCACGAGTTGCTATGCAACCATTTGGcgCCAAAGCTGAAAGGTCGACCGCGGCGCAAGCGCAAAAAACGGAGCGTCTCACCGGCCGGCGAGTCGAGCAACGAGAGCGAAGCCTCGGTCGCGTCGACTGCGAATCTCACCTCGGCTCCATCGACACCCGCAAAATCGACGACCTCCTCCACAGGTGAACTCAGCGCGTGTAAAGGAACGGCCGATCGCAAGACCAGCGCCGAGGAGAAGAAGTTTGTCGGCGACGTGCACAACTTCATGACCTCGCGCAACACGCCCCTGGGGAAAATCCCGCTTCTAGGATACAGACAGAttgATCTGTTTTTGTTCTACACAAAAGTTCAAGATTTGGGCGGCTATGATAAAGTCAGCGCGAACCGTCTTTGGAAGACAATTTACGATGAGCTTGGTGGTGCTGTGGGCTCGACGAGTGCAGCGACGATAACGAGAAGGCATTACGAGAAgCTATTACTGCCGTACGAGAGATGTCAAAAGGGTGAGGAGTTCAAAGTCCTGAAGCAAGTTGGCAGGCCTCGTACAAAGACATCGAGCGTCTCAGAGGCGTCCGAAGAAGAGGTCAAACGAGAGATCGAGAGTCCTCAGCCTTCGGAGACACCACCCCCAGCCGACGGCAATTCGACGACTGCCCTCACCTCTCCTCCTTTACAGTCAATTCTTTCGTCTTCGGTACCACCTCCGTGTTCGCCAACCGGCCTGCCAGTGAGTACAGTGACAACGAACGCCACAACGGTCGTTACGTTAACACCGCCACCAGAAAAGGACATGAAAGAGATCAAGCTCGACTCGAAACAGACGAGCCTCTTGGCCCAGGGCAAAGAGAACATACCTCTGTTTGAGGAGAAGGGTGCGATTTTCGTCCAGGACAAACCCCGCTCGCCTGAAGTTATTGACCTTGAGACTGAGAATGAGTCGGGTAGCAGAGACAAGCTTATCATTCCTAGCTTCAAGAAGCGCAAGCTCGAGATACTGCGTGAAGGCGGCTTGGAAGTCACAGCTGTCGAACTGGATTCTCGACCAAGCGTAATCCAACCGACGTCGACACCAAACCACACAATACCGATGACTAccccgacgacgacgacaccCCCAGCGTCGGTCACGACGGGCCCGTCGCCGTGTTCAACGCCAGTCTCTGTTTTCTCTCCCGCGAAACAAGAAGAGAAGCCATCGTTCGCCTCACCCCCGAAGATCATTCCCAAGCTCATAAACGTCACGGTAACACCCGACATCGGTCACATGATGCCGCGAACGGAGGATCTGTCGTCGCATCGTCAAAATCCGCACTTCCCAGTGCACGCCAAACAACAGACACCACACGCAAACGGAAGCCCACCGATCAGCCTGCAGACGCCGTCTAGTCACAACAACAGCCGAGTCATGAACGTCGGTAGTGCGAGCCACAGCCCGTTGTTACAGTACTACGGGAGTACCAGTGTGTCGTTACCACCCTCGTCACCGCATGCTGGTCTGTCGCCGTCTCCTCTAAACTATCAGTTCGTTCCGCCATCGTTGCCCATGATGCCATTACCAAACGGCAGAGCGCATCCGCCGATGGTAACGCAGGGAAAGTCGATTTTCGCGAAAACCGGTGAGAGTAGAGTCTACGGGGATCCAAGGGATTATATCACGGTGCCGAAGTACGTGCCCTCTTCCATACCTCAGCCACATGTATCCAGGAATCACATTGGTGTGCCGGCTCTGAGTGTTCCGCGCTGCAACAGTACTGATAACCAGGCTGTCGGAGCACTTGACCTCTCGAGACAGCCCAACAGTTCCTCGCGTACGAACCTCGAGATCGTCAAAGTACCCGTTGTACCTCGACCTACGCCTTTGAATCTCGAAACGCACAACCGTACCGGTGGATTCATTAGTGCGACTGAATTGGTGATGTCCAAACCTCCAGAATCGCGCAagaatattaatagtaataatttgtaCATACCCGGACCACCTTTGATGCCGAGTAGTAACGCAGCTGCTCCTGGTGGTTATCTCAATGTCTTGGATAATCGTACAATGACAAGCAATAACCTTGAGATTACGTTAGTCAGTCCAAAGAAGGGAGTTAACATGGTCGGGCTACCAGAGCTCAGTCCACCGATCGTTCGAAGCAACAATGTGATACAACCACCGCCACCATCGATACCAATGCAGAGGAGGCATCCCCTGCCTCCTCAGTTGTCGCCACAGCCTCAGCCGTCACCCCAGCAGCAACACCATCTGAATGGCAAGTATCCGTTAAGGATGCCAGCTGAGCCCATATCTCCGTACACTCCTCGCAAACCGAGTACATTGAGCAGCAGTGGCAGCAGTATGCACCATCCAGTGATACCGAACGTGCCAAATCTCAGCCACCTGAGCTCAAGCTACGGCAAGCCAACTCAGGTGGCGGGTGGTACAAGCTACCAGCAACAGTACGCGATGGAGCAGAAGAGAAAAGCCGAGGCTGCTGCGATCGCGGCTTCGAACAGTCGAGAACAGCAGCAGCGTAGGATAAACGTGAACGACAAGATTTCGATGCAGCAGCAACTCAGATTAGACGCTTCGATTGCATCgaagcagcaacaacagcagcatcaGCAACAACAATCGAGgGATGCCGAAGCGAGGAGGCACAGTATGCCAAATATACCGACCAGTTACATTCCGGCGATGCCACCAACGTCGAATCCAGCCTTCCTCGCGCACCAGCTCGTCGCGTCCAGCAACGGTACCTCAGCGGGTGGCAAGTACTTGCCGATACTGGACCCGTCGATGTATTACCCGGCCTTTTACAACGGGCTCTTCCCAGGAGGCCCGATACCAGCCAGCGCAGCTGCAGCCCCGACGCCTTTTCTACCGCCCGAGCTTGCCAACGCCTACTACAAGGAACTGTTTTCCGGGCCAGCCACGGCCCAGCAGACGCGACTCGCTGCCCTGGTAGCACAGCAGTCACTAGCACCccagcaacagcagcatcaTCAGCACGCGGGGTCCAAGTAG
Protein Sequence
MAQKDEIKLLGGACFSHGPYTFYKAVRIGANRVLRLGNFFLTKLWSDADLVSIGELQLLWIDNRGPNTPLASLRLYFLPENTPDGRRDSHGEDEVLSITEKVVVRVHDLVTCLPPSLEWSCGREVSYPPTPISSRDSSPQPQTLSDPGLDFSDVERHQKDLETAALTRHRGNTDSNNVTHNHSNNNNSSNPNNNNNNNSSTKNNNNNNNNNNSNENCAAPGQTKVVVLSYPRYCRYRALLRRLDGAEPNWLCSSIAAALGGFTAHPGTRVLFCRDTFDYPDLETHELLCNHLAPKLKGRPRRKRKKRSVSPAGESSNESEASVASTANLTSAPSTPAKSTTSSTGELSACKGTADRKTSAEEKKFVGDVHNFMTSRNTPLGKIPLLGYRQIDLFLFYTKVQDLGGYDKVSANRLWKTIYDELGGAVGSTSAATITRRHYEKLLLPYERCQKGEEFKVLKQVGRPRTKTSSVSEASEEEVKREIESPQPSETPPPADGNSTTALTSPPLQSILSSSVPPPCSPTGLPVSTVTTNATTVVTLTPPPEKDMKEIKLDSKQTSLLAQGKENIPLFEEKGAIFVQDKPRSPEVIDLETENESGSRDKLIIPSFKKRKLEILREGGLEVTAVELDSRPSVIQPTSTPNHTIPMTTPTTTTPPASVTTGPSPCSTPVSVFSPAKQEEKPSFASPPKIIPKLINVTVTPDIGHMMPRTEDLSSHRQNPHFPVHAKQQTPHANGSPPISLQTPSSHNNSRVMNVGSASHSPLLQYYGSTSVSLPPSSPHAGLSPSPLNYQFVPPSLPMMPLPNGRAHPPMVTQGKSIFAKTGESRVYGDPRDYITVPKYVPSSIPQPHVSRNHIGVPALSVPRCNSTDNQAVGALDLSRQPNSSSRTNLEIVKVPVVPRPTPLNLETHNRTGGFISATELVMSKPPESRKNINSNNLYIPGPPLMPSSNAAAPGGYLNVLDNRTMTSNNLEITLVSPKKGVNMVGLPELSPPIVRSNNVIQPPPPSIPMQRRHPLPPQLSPQPQPSPQQQHHLNGKYPLRMPAEPISPYTPRKPSTLSSSGSSMHHPVIPNVPNLSHLSSSYGKPTQVAGGTSYQQQYAMEQKRKAEAAAIAASNSREQQQRRINVNDKISMQQQLRLDASIASKQQQQQHQQQQSRDAEARRHSMPNIPTSYIPAMPPTSNPAFLAHQLVASSNGTSAGGKYLPILDPSMYYPAFYNGLFPGGPIPASAAAAPTPFLPPELANAYYKELFSGPATAQQTRLAALVAQQSLAPQQQQHHQHAGSK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-