Basic Information

Gene Symbol
Arid2_1
Assembly
GCA_000648655.2
Location
NW:2251358-2291365[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.7e-25 2.8e-22 78.3 0.1 2 89 46 131 45 131 0.95
2 2 7 1.1e+04 -7.6 6.0 50 62 1507 1519 1483 1544 0.47

Sequence Information

Coding Sequence
ATGAGGAACATAATGGccctgcagcagcagcaaaatACTGCCTgcggtgctgctgctgctgctagtGCTGGTGTCTCGGGTAAAGATCAGCAAAATAATGCCAAGGATTCGAGCTCCGTTAGTTACGAGAGGATGCGCGAATCCTTCATGCGCGACCTGCAGCACTTCCACGATACCAGAGGCACATCGTTCAAGAAAAATCCAAAGGTCAATGGAAGGAATGTGGATCTTTACAAACTCTACACACTTGTTACATCTAGAGGCGGATGGATACAGGTAAACTCGAAGAACGAGTGGACGTGGCTCTGCGAGGAGTTCCATTTGCCCAACGGCTGCGTCAACAGTGGCGTTGGcctcaaacaaatttatttacgATACCTTGACAGGTATGAAAAGGTACACTATCTAGGCGAAGACGGTCATCAAGCGGACGATGATGACGAAGACTCGAGACATCGGAAGTGGAATGTCAGGTCTCTGCATTCGGTACCACATACCTACAATCACAATCAGCACAACGTGGCTgACTCGCTGCGGGAGTACAACGGGCTCTCCTCGGACCTGTACAAGCCGTCGAGCTACGACAAGCTAGCCCTGTCCCTGCTCTCGCCCCTGCCGAACGAGCAGGACTTTGCGATCAACGTCTGCACCTTTTTGTCGAACGAGGGCAAGCACACCCTCCGGCTGGACAAGTACCCCCGGCTCATAGCCCACCTGATAGCCCACGCCGGTGTCTTCGACTCCCCGGGCACGCGACAGCTCTTCATCGAGGTCTACTCGCGGGTGCGCAACTACTCCATCAACTCGTTCTGGCAGGATGTCCTCGACTCCCAGGACGTCCTCGACCTCACCGACGAGAGACTGTTCTTCCTCCCTGGCAaaaagaagacgaagaaaaaggCACTCCCCCCTGGCCCCGATAACAAAGCGCTGTCTAGCAGGCAACAGTCGGACGACGGCTCTTGTCCCATGGACATCGATAACGGTTCGTTGAGCTGCGACAGGCTACTGGAGAGCACCGACCTCGAGGTACTGGACGAGCGATTGGGTTCGACGACGAGCGCGCATATGCTGTTTCTCCTGGACGAGGCCACGTGTTCCTCGTCCATTTCCTCGAGCACCTTCAAGGACCAGAATCAGAACTCGATCAAGTTCGAGGAGGACGACAGGGATCTATTTTGCGTGGGTCGGACGTTCGGCACCCAGGATCCTTACGGTCAGCGTGTCCTCCAGATCGCCTCGATTCTTCGCAATTTGAGCTTTACGCCCGAGAACGCGGCGGTGCTCGGCCGCTCGCCCCCTTTTCTGCGCTTCGTGTTGCTCTGTGTGCGCGCCAGGTGGAGCAATCTCCACCAGTTGGGTTTCGACACCTTGGGCAACGTCGCCAGCGAGATCGTTCTCAAGGACGCGGGCAAGAGGCTCACCAGCGTCATATTGCAGTGCGTCGCCCGGGGCATCAGCTCGCAGGACAGGTTCGTCGTCATCAGCTGCCTCGAGATACTCAACAAGATCAGCCTGCAGGACTTGAACGAGGACACCCTGGTCCACGGCTTGGACGATCACGTGTACGAGCTCATATGCAGGTTCCTGGCTCTCAGTGACATTGCCCTGCTCGTCTACACGCTCGAGTGCCTCTACGCGCTCACGTCCCTCGGCGAGAAGCCTTGTACGAGCGTAGCTCGGGTTCGAGGTGCCATAGACACCCTCGTGGCGCTCGTTACCGTTGAAGCTCAGAGTTACGGGCCCAAGGCTTGCATACTAATGCGGGTCGTCGAGACAGTCTCCTCGGTGCCCAATTCCCAGCAGCAGCCCCAGCAATCCCCGTCACCACAGTCTGGACAATCGCCGCAGCCAGTTCAGATTCAAGCGTCGCCGAGCTCGCCGCACGTGCACCAGCAAAATGCTACGACTGTTGTTACCAGTGGCACGAATCACGTGAGCGCCACTGCCCCGACTACTGGTGCGCCTACTGCCACGAATGTGTCTGTTGTTGCTCCTACGCAGACGAGTGCCGTGAGCAGTACTGCCGCTAACCCTGTCGCTCATGCTGCTTCTACAACCAACGTGGTGAGTGCTCCTGTCAATCAGCAAACGCAACAGACTCCTGTCGTGCAAgtgcagcagcaacagcaacagcggCAGACGCAAGTTGTTCAAGTGCAACAAGCGCAAGCTCAAGTTGAGGTGCAACAACAGGCACCCGCGGCTAAGCAAGTGGCTGCCAAGGTGACCACGGCGTCCAATTCGTCTTCCAGACCGAGTACTCCTAAGAATGCTGCTGCAAaaGTGCCAGTAACCAATTCGTTACAACAGCAACACGCGCATCAGCAAATCATCCAGGAGAACGAGCAGTTCGCCCTTGGGTGGTTGAAAGCTAACTTTGAACCAGCTCCCGGTGTGAAAATCGAGCAGGaagaattgtacaaaaaatatttaggaaATTGCACAAAAATCGGTAGACGAGGCGTTATTGCACCTCTGCATTTCCCCAGATGTGTCAGATCCGTCTTTGGAGGCACGATAGGTCCTAATCCTCTTAAGGGCGATACTAGTGGATCCATGTTCTACGAGGGTATTAAATTGCGCGTGAACCCGGGCCAAGTGTCATATCCGAGCCAAAGTACGACGAGCGCGACGAATGCCAATCAAACGTTGGCAACAgtatcagcagcagcagtagcagcaacTGGCAATGTCGTCACGGTCGTCAGCAGTGGAAACCCGGCAAAGGTGCAGCAACTACCACAACAGCGTAACGATAGCACACCGACACCGTCTTCCTCGATCCTAAAAGCCCAACTGTCCGCACCGCCAAAACCCCAACTACCGATCATTCCTCTTAGTAGTCCGTTAAAAACCCTTACCCCTGTCACGAGCAGCGTCCCTTTCGAGCCCAAGAGCCAGGTCTCGGTAGCGCATCCTCACCTGAGCCAGGCCCTCCTAGCCAGTGGTGCtcaacagcagcaacaatcAACACAATCCCAGCAGCAAGCAACTGTACAGACACCAGCAGGTCAGCAAGTGATGCAGGTGATCGTCGAGAAAGACGGTCGCGCGGTCGCCACGACCTCAAGCTCCATTATCAAAAGCCTACTGGCAACCAAGGTAACGGCCAGCGGCGAGTGCATGCAAGCCGCCGCAGCCTCCCAATCCACCTCTCCCTGTGTGTCAGCCGCTGTGCCGGTAGTAACAAACGCAACCGGCGTAGTATCCAGCATCAGTGCCAACCAGCTACTAACCGCCAATCAGGTTGTTCAACGTCAGCAACAGCAGCGTCAGCAACAATTGAATCAGCAACAAATAACGGGGGTTTTGCAAACGACGACATCGGTCGGCACGCCGGTCAAGATAATCACTAACGCCAAATCAAAGCCAGCTATCGTAACTCTAAAGAAATTCCGGAGGCTCAACGGTGCCAAGGTCATTGTTGCCAATAACTGcgagaagGTCGACTCTATGGAGACGGATAGCAATGCAGCGTCGCAGGCACAAACGGCGGCAGCTGTTGCGAGCATAACTACGCCGGCCAACAGAGAACCAAATAACATAACCAGTGCTCTACGAGTCTACCGACCGGCTCATCATCAACAAGTGTCAGTTGTGTCTGGCTCAACAAGTCCGGCTAGAACAGCTGGCACGCAACCTCAGCAACCAAGAAACGTCTGCACCACTCCGATTGCTGAAGATTCAGATTCGACAAATAACTCGATTGCCTCGTCTAGTGGTATTGGCGGCAGTAGGGACTTGTCCGGTGTTGGAGCGGAGGAGGATAACTCATTGACGAGTTTCGAAGGTATCCTCCAGAATGGAGCACCGAGTAATCTTGACATTGACGCTCAGGAGGACGGCTCGTCCAAAGACTCATCCAGTGCTGGCTCGAAGGACAAGCCGTTACAGGGCATGATGCTTGCCGATTTGTTAGAGCGCAAAGTCGACAAAGAGCCGGTGATGAACGGCCTGCTAGGGGGTAGCAAGAAGGATCTTGTGGAGAATCATATTAAAATGGTACTCAAAGACTCATCTGACGTGAAAATCAAGACCGATGTATCTGAAGACACGCTTATGGAGGCGCCCCAGCCTCGTGCTGGAATCAAACGTTCTGCTAGTATAGACGAAGAACTAGCTGTGGAAGTGAAAAAGCCCAAGTATGCGAATGGTACTACCTCTCCGGATCCGGCGGTTGTTGACTCGACGACCATTTCGAGTATCAAGTCGGAAGAGGACGAGAAGGAAGAGAAGGTGACGGTCTCGTCAACAGCGGCAAATCTTTACGCTGCGCTTGCCGCGGATATTATCGATGACGAAACAGATCTTGAGGATCCGGTGACCGTTAAGGATGAAAAACCCGTTATCAAGGAAGAAGTTCAAGTTAAGGAGGAGCTTCCACAATCGCCTGTTGCGGTTAATCAAGTGGTGGGAAATCAAATAGTCCTGACTCCGGAACAACAGCAGCACATTCAGCAACAAGTGCAAGCGCAACAGGCAGCTCAGCAGGctcaacagcaacaacaacaacaacagcaacagcaaaaGATACAACAAGTGGTTCAGCAACAagtgcaacaacaacaacagcagcaatcACAACAGCAAACCCACCAGATTGCTATAACCCAACAACAGCTCCAACAGCAGCTACAGCAAGGGTTGCTTGTTGCATCTCCACGTCAAATAGTCGTTCAGCAAGCCATCCAGGCCAATAACCAAATCGTTACTATTCCCACTTCTGCGATCAAGGGTCGCCAAACCCACCAGATACAGTCTCAAGTGTTGCAGGTGCAACAGGGACCTGGTGGACAAACTCATTACGTTATTTCTGGTGGCGTTCCTGGCCAGAGTTACATGGTGGCCCAACCCCAAACGGCTCTTGTTCAAGGCCAAGCACAAACGGTTCTGGTGGCTCAGCAACAGGGCACCAACACTAAAACGATCATTATACTGCAACCCCAGGCTACCGCACAACCGCAACAACAGAAGATGGTTGCCGTTACGCCTCAGGGGCAACAGGTCGTTGTGACTCAGGTTCAAAGACCGATACTGCAAAATTCATCGATAGGACAAATCCCTCCACCCTTGGTACCTACTTCGGGAAATATGACCCAGGCCTCGATTGTGATGAACAGTGCTGTAGCTCAACAAAttcagcaacaacagcaactaCAAGTACATCCCCAACCTCAACAACAAGTCCAATCGAACCCAGTGACAATGGTGCAAACACAGCAAGTTATGACTGGATCAGTGCCCTCAAGAGTCGTTACGCCAACACCTGCCAACACACCTCCACCAACTAGACCCACGACCCCGCATCAAGCTGCTGCGACGCAACAACCCACTGTAGCCGCTCCGGTAGTTGTGAAAACGCCGCAGCCATCCGTAACACCAGCTCAGCCAGTGACCAAGGACTCCAAAGACGTGAAAATCGTTACTACGTCGACTTCTGGGGGAACGGAAAACAAGGGTAACAGTGGTAATAATGGTAGTAATAAGTCAACGACGAGTCAGCAAGAAGCGACGACCACGTCAACGATTACGAGCAATAGCACCACGCGAGCACAAACTACGTCGACGTCCGCCGCGACAACAGCTACTCCGACTACGACAAGCAATATTTCCAAAACCATTACGATCAAGATTGATCCTACCGCGTTCCTCTGTGAATGGAGAGGTTGTCTCAAACAATTCAAAACTCCTCGCAGAGTGTTTTTGCATGTTTGCGAAGTACACTGCCCAAACGGAAACGAAGAAAGTCTCTGTCTCTGGCCGAACTGTGACACTTTGAAGCGACGAAGATTTTCCCTAATGACGCATCTACTTGACAAGCATTGCTGCGAGGAAGTAATGCTGATGAGAAGAAAACAATTGAGCTTATCGGGTAAGACGGAAGTGACAACGACGACGGCGGCTGCTCCCGTGACTACTCATCATCCAGGCTATGCACCTAATGCTGCGTTCCATGCCATAAAGAGGCACGCCCTAGAATTCGTCAATCCTAAGGAATTAATGCAAAGGCCATCCAAGCCCGCTGCGGCCAACTCAAGCTCCTCTTCCCCCCGACCCGGGCAAAATCCTCCACCAGACCAGgatgACAATGAAGGACCTGTTACGAAAAGTATTCGCCTGACAGCAGCTCTCATTCTTAGAAACCTAGTCATATATTCCGCGCAGGGTAGGAGACATCTACGTGCATACGAGCCACATTTGGCCGGTGTGGCATTGAGTAACGTCGAATCGTCCAGGACAATCGCACAAGTTCTTTACGACATGAATGATCAAAGTAGCAGTGGTCACAGGTGA
Protein Sequence
MRNIMALQQQQNTACGAAAAASAGVSGKDQQNNAKDSSSVSYERMRESFMRDLQHFHDTRGTSFKKNPKVNGRNVDLYKLYTLVTSRGGWIQVNSKNEWTWLCEEFHLPNGCVNSGVGLKQIYLRYLDRYEKVHYLGEDGHQADDDDEDSRHRKWNVRSLHSVPHTYNHNQHNVADSLREYNGLSSDLYKPSSYDKLALSLLSPLPNEQDFAINVCTFLSNEGKHTLRLDKYPRLIAHLIAHAGVFDSPGTRQLFIEVYSRVRNYSINSFWQDVLDSQDVLDLTDERLFFLPGKKKTKKKALPPGPDNKALSSRQQSDDGSCPMDIDNGSLSCDRLLESTDLEVLDERLGSTTSAHMLFLLDEATCSSSISSSTFKDQNQNSIKFEEDDRDLFCVGRTFGTQDPYGQRVLQIASILRNLSFTPENAAVLGRSPPFLRFVLLCVRARWSNLHQLGFDTLGNVASEIVLKDAGKRLTSVILQCVARGISSQDRFVVISCLEILNKISLQDLNEDTLVHGLDDHVYELICRFLALSDIALLVYTLECLYALTSLGEKPCTSVARVRGAIDTLVALVTVEAQSYGPKACILMRVVETVSSVPNSQQQPQQSPSPQSGQSPQPVQIQASPSSPHVHQQNATTVVTSGTNHVSATAPTTGAPTATNVSVVAPTQTSAVSSTAANPVAHAASTTNVVSAPVNQQTQQTPVVQVQQQQQQRQTQVVQVQQAQAQVEVQQQAPAAKQVAAKVTTASNSSSRPSTPKNAAAKVPVTNSLQQQHAHQQIIQENEQFALGWLKANFEPAPGVKIEQEELYKKYLGNCTKIGRRGVIAPLHFPRCVRSVFGGTIGPNPLKGDTSGSMFYEGIKLRVNPGQVSYPSQSTTSATNANQTLATVSAAAVAATGNVVTVVSSGNPAKVQQLPQQRNDSTPTPSSSILKAQLSAPPKPQLPIIPLSSPLKTLTPVTSSVPFEPKSQVSVAHPHLSQALLASGAQQQQQSTQSQQQATVQTPAGQQVMQVIVEKDGRAVATTSSSIIKSLLATKVTASGECMQAAAASQSTSPCVSAAVPVVTNATGVVSSISANQLLTANQVVQRQQQQRQQQLNQQQITGVLQTTTSVGTPVKIITNAKSKPAIVTLKKFRRLNGAKVIVANNCEKVDSMETDSNAASQAQTAAAVASITTPANREPNNITSALRVYRPAHHQQVSVVSGSTSPARTAGTQPQQPRNVCTTPIAEDSDSTNNSIASSSGIGGSRDLSGVGAEEDNSLTSFEGILQNGAPSNLDIDAQEDGSSKDSSSAGSKDKPLQGMMLADLLERKVDKEPVMNGLLGGSKKDLVENHIKMVLKDSSDVKIKTDVSEDTLMEAPQPRAGIKRSASIDEELAVEVKKPKYANGTTSPDPAVVDSTTISSIKSEEDEKEEKVTVSSTAANLYAALAADIIDDETDLEDPVTVKDEKPVIKEEVQVKEELPQSPVAVNQVVGNQIVLTPEQQQHIQQQVQAQQAAQQAQQQQQQQQQQQKIQQVVQQQVQQQQQQQSQQQTHQIAITQQQLQQQLQQGLLVASPRQIVVQQAIQANNQIVTIPTSAIKGRQTHQIQSQVLQVQQGPGGQTHYVISGGVPGQSYMVAQPQTALVQGQAQTVLVAQQQGTNTKTIIILQPQATAQPQQQKMVAVTPQGQQVVVTQVQRPILQNSSIGQIPPPLVPTSGNMTQASIVMNSAVAQQIQQQQQLQVHPQPQQQVQSNPVTMVQTQQVMTGSVPSRVVTPTPANTPPPTRPTTPHQAAATQQPTVAAPVVVKTPQPSVTPAQPVTKDSKDVKIVTTSTSGGTENKGNSGNNGSNKSTTSQQEATTTSTITSNSTTRAQTTSTSAATTATPTTTSNISKTITIKIDPTAFLCEWRGCLKQFKTPRRVFLHVCEVHCPNGNEESLCLWPNCDTLKRRRFSLMTHLLDKHCCEEVMLMRRKQLSLSGKTEVTTTTAAAPVTTHHPGYAPNAAFHAIKRHALEFVNPKELMQRPSKPAAANSSSSSPRPGQNPPPDQDDNEGPVTKSIRLTAALILRNLVIYSAQGRRHLRAYEPHLAGVALSNVESSRTIAQVLYDMNDQSSSGHR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-