Cflr007550.1
Basic Information
- Insect
- Copidosoma floridanum
- Gene Symbol
- Xbp1
- Assembly
- GCA_000648655.2
- Location
- NW:1848530-1851184[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.6e-13 9.1e-11 41.0 16.4 2 65 98 161 98 164 0.96 2 2 2.1 1.2e+03 -1.1 0.1 28 49 250 264 246 273 0.50
Sequence Information
- Coding Sequence
- ATGGTGGTTGAACAATCGGGAGCCATGAGCGCCGTGAAGAGCGTCATCATCACCCTGCCTGCCAAGAGCTTGTCCGCGGCGAAGACCGGCAGATTGACGCCCATCCTCGTCGACAAGATTAAAATGGAGAGCGGAGGCGTGGGGAAGCTCCAGGCGGGCAAAAATTCACCTGCCACTGCTGTCGTCCCAAAGAAGGCTGTCATCTTTAAGCAGGATAACTTGCAGGAGTTGCAGGTCGTGCCTGCTATGCTCAACCGAGGCAAAAAGCGCAAGCTGGATCATCTCACCTGGGAGGAAAAACTACAGAGAAAaaaattgaaaaacagaGTGGCAGCCCAAACCTCGCGCGATCGCAAGAAGGCCAAGCTCGACGAGCTGGAAGAGTCGGTGATGGCCTTGCACGAGAGGAACAATCAACTGGAAGATGAATGCTCAAAACTGAGACTTCAAAACGAATTACTTGTTACCGAGATAcagcagctaaaaaaaaatcagaattacAATAGTAAAGCCACCAAGGAAGACGTATGTTCGATGTGTCAAGCCCGTGTCGACTGCGCTGCACCTACGCTGGGATCAGCAGTATCCCCGATAATTGACCCTCTGCAGCAGGGTGGTGTAGCACAGAAGGCACGAGCTGTGACGACGTTGAGCAAGAGCGCCAGTGTGGTACTGAAAATCTTGACCCTCTACCTCCTCTCGAAGACCTATTTAGCGAATCAAGGGGAAAATGGAAACGAGTACATTGAACGACTTGAAGAACTCGCCGAGAGCCTTATGCGAGAGGTTGCCGCCCAAGTGGAAACAAATTCTCCTCACACAGATGAACaggaTGCAGTCGAGAAAGAAAGCGCCTGCGAACTTGACATTACAGAAGAAATGGTGGGGCAGGCATCAAGTTATGTGGAAGCCGATGCGACTGACGGAAACATAGCAATGGTGATGGATGTGGAACAGAGCCAAGCTCAAGTAATTCCGCAAGTAAATTTACTACCCACAGATTTGATACCGACAATTACATTGAACGCATCGGATCCCATTACAATCGCCGATAACATTGTTCAAATCAAAGAAGAGCCGATGCAAGATACTACCACCGAGTTGGTCTATGGAACATACGACGAAGCTACCAATTGCATCACGATTATCTATCCAGAAGAGGAAGTTGCGCACTTAACCATATCAGAACAGCCACAGAGCCCACAATACTTACTTTCGCCCTCGTACTCGTACGATTCCATGTCACCCCAGAGCGTACATTCCGAAGATACTGACCTTGTTACACCAGTTGCGACGATGGTCAGTTGTAAGTCTGATTATGTGCATTCAGATGCTGGCTATGAATCGCCTGGATCACCTGAGAGTGTTGGAAACGATGCTCTTACGGATCTTTGGCAGGAGGACTTTCGCGAGTTGTTTCCCACCTTGGCTTGA
- Protein Sequence
- MVVEQSGAMSAVKSVIITLPAKSLSAAKTGRLTPILVDKIKMESGGVGKLQAGKNSPATAVVPKKAVIFKQDNLQELQVVPAMLNRGKKRKLDHLTWEEKLQRKKLKNRVAAQTSRDRKKAKLDELEESVMALHERNNQLEDECSKLRLQNELLVTEIQQLKKNQNYNSKATKEDVCSMCQARVDCAAPTLGSAVSPIIDPLQQGGVAQKARAVTTLSKSASVVLKILTLYLLSKTYLANQGENGNEYIERLEELAESLMREVAAQVETNSPHTDEQDAVEKESACELDITEEMVGQASSYVEADATDGNIAMVMDVEQSQAQVIPQVNLLPTDLIPTITLNASDPITIADNIVQIKEEPMQDTTTELVYGTYDEATNCITIIYPEEEVAHLTISEQPQSPQYLLSPSYSYDSMSPQSVHSEDTDLVTPVATMVSCKSDYVHSDAGYESPGSPESVGNDALTDLWQEDFRELFPTLA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -