Basic Information

Insect: Copidosoma aretas
Gene Symbol: stc_1
Assembly: GCA_030522625.1
Location: JAPYYV010005268.1:15304-21322[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 2 3.9e+04 -4.3 1.6 15 19 511 515 510 515 0.81

2 16 0.13 2.5e+03 -0.3 0.3 4 10 544 550 543 551 0.94

3 16 3.2e-07 0.0062 17.6 12.8 4 19 561 576 559 576 0.93

4 16 4.5e-06 0.087 13.9 18.4 1 18 612 629 612 630 0.99

5 16 0.32 6.2e+03 -1.6 1.8 1 10 639 648 639 648 0.88

6 16 0.83 1.6e+04 -2.9 0.8 6 10 658 662 657 662 0.89

7 16 4.9e-06 0.095 13.8 11.2 1 18 668 685 668 686 0.96

8 16 1.5 2.8e+04 -3.7 1.4 5 10 715 720 715 720 0.93

9 16 0.00073 14 6.9 11.3 4 18 733 747 726 748 0.85

10 16 1.5 3e+04 -3.7 2.0 5 10 777 782 777 782 0.93

11 16 0.0019 37 5.5 8.2 1 11 788 798 788 799 0.96

12 16 0.66 1.3e+04 -2.6 0.5 4 10 803 809 802 809 0.89

13 16 1.2e-10 2.3e-06 28.6 14.0 1 19 815 833 815 833 0.98

14 16 2 3.9e+04 -5.4 8.5 10 19 880 890 872 890 0.74

15 16 0.73 1.4e+04 -2.7 15.1 1 16 926 941 920 952 0.82

16 16 1.1e-06 0.022 15.9 14.1 1 19 958 977 958 977 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	2	3.9e+04	-4.3	1.6	15	19	511	515	510	515	0.81
2	16	0.13	2.5e+03	-0.3	0.3	4	10	544	550	543	551	0.94
3	16	3.2e-07	0.0062	17.6	12.8	4	19	561	576	559	576	0.93
4	16	4.5e-06	0.087	13.9	18.4	1	18	612	629	612	630	0.99
5	16	0.32	6.2e+03	-1.6	1.8	1	10	639	648	639	648	0.88
6	16	0.83	1.6e+04	-2.9	0.8	6	10	658	662	657	662	0.89
7	16	4.9e-06	0.095	13.8	11.2	1	18	668	685	668	686	0.96
8	16	1.5	2.8e+04	-3.7	1.4	5	10	715	720	715	720	0.93
9	16	0.00073	14	6.9	11.3	4	18	733	747	726	748	0.85
10	16	1.5	3e+04	-3.7	2.0	5	10	777	782	777	782	0.93
11	16	0.0019	37	5.5	8.2	1	11	788	798	788	799	0.96
12	16	0.66	1.3e+04	-2.6	0.5	4	10	803	809	802	809	0.89
13	16	1.2e-10	2.3e-06	28.6	14.0	1	19	815	833	815	833	0.98
14	16	2	3.9e+04	-5.4	8.5	10	19	880	890	872	890	0.74
15	16	0.73	1.4e+04	-2.7	15.1	1	16	926	941	920	952	0.82
16	16	1.1e-06	0.022	15.9	14.1	1	19	958	977	958	977	0.97

Sequence Information

Coding Sequence: ATGGCCACCTGGGACGGCTCTTACCCAGATCCAGATGGGCCCAACTACTACGTCAATAGCTCTGATAGCCAGATACCTGCCAACATCCCAGCATGGGACTACTATGTGCCCGGGCCCGGCAATACCTATGCCCAAAGTCAAACCAACCCCTATCCCATCCGTCGGACTATGGTCTTCGAGCAGAGCGCACCTGGTCCTGCATATTATAATCACGCTGATGAAAAGACCATTCCCTCTTTGGTGCCACATGTCGCAGCAAATGCTGAGTCTCATTCTGGTAATGGGATGCCTGCTGTTTTTAACAAGATCCATAAAGTAGGGAACTCTGAAGCCAATGTCAACACTATCAATAATCAATTACCTTGTTTCTATGAAGATAATAGACTTGCTCAAGAAGGCTCGGCTCATTACTACAACAAAAACAACCATCATAATAGTGGTAAATCCAAGGATACAAATAAGACTTATGATATGTCCAACATAGTTGAGAACTCTAATTTACACGCTACTGCAACTGAATTTGTACCAAATCTGAATAAAAAAGATCGTAGCACCAATGTTAATGCATATACGAGTAGCAAAACCCGTATGAACAATAACTACCAAAAGCCGGAAGTTAATCGGGATGAACAGGCTGTACAGTCTAATAACTTTTTCGTTAAGGATTACAAGCAcaatgatagaaaatttgaaaacaaaaggGATGCTGATAAAAGGTGGAGGGACAATCAAACCAATGGCCAATATTACAGAGATGACAAGAAGGATTATAAGCCCCAAAATTTTAAACAGCATCAGAATGATAGATACAGtctgaacaaaaatttcaacgACAAACCACGATTCACTCGCTCAAAAAAGGATGATTCGGAAAGTATCACATCAGAAGCAAATACCGAGTTGGAGACGGCCGACGGTCGTTACGATAATTCAAACCCTGTTGAGACAGTCGACTCGTCAGTTAAAACGGACAACACCCAAACCACAATGCCGCGATCAGCGAAAAACTCGAgagcaatgttaaataattacCGAGACGATAGATACGAGAGATACAACAGCAGAGACCCCAGAGATTTTAGGGATTGGGAACCCAGAGATTCGCGTAATTCGAGAGATTCCCGCGACCCCAGGGATTTCcgagatagaaaaaataattatcaagagCCCAATGGATACAATAGAAGTAATTACAACCGAGATAAGTACGAGAGGAGAGATAACAGGACTGTCGCCGCCGAGAACCGCAGTAAAGACTTGACGGATTGGAGACAGAGGCCCAGTGATAACAGCAGCAAGATAACTTTGCTCAAACGTTCGTACAACAAGAAGTATGAACCAGATGATGCTGCCAGTCAGAGGGAAAGATTAACGGAGCAACTGAACCGAGGCCAACTGGAGTGCTTGGTTTGCTGCGAGTCTATCCGACAGTCTGACTACGTGTGGTCCTGCAACAACTGCTACCACGTCCTGCATCTAAAGTGCGTGCAAAAATGGGCCACGTCGTCGCAAGATGACACCGGCTGGCGCTGCCCGGCCTGCCAGAACGTCACCTCGAAGGTGCCCTCGGTCTACCTCTGCTTCTGCGGCAAGACGCACAACCCCGAATGGAACCGACGCGACATCGCCCACTCATGCGGGGAAACGTGCGGCAGGCCGCGCGCGGAGTCCAACTGCGTGCACAAGTGCACGCTCCTCTGCCACCCCGGCGCGTGTCCGCCCTGCTCGGCCATGGTCACCAAGCACTGCGGGTGCAAGCGGACCTCGCGCTCGCAAAAGTGCAGCGCCGGCCCGATGCTGCAGTGCGACGAGATCTGCGATCGCGTGCTGAATTGCGGCCTGCACCGGTGCAAGAAGCAGTGCCACCACGGGGAGTGCGAGCCGTGCGGCGAGGTCGTCGAGCAAGAATGTTTCTGCGGAAAGCACAGTCGGGAGAAGACCTGTGTCCTCGACCTGCCGCTGTTGTACTCCTGCGAGAACGTGTGCGACAAGGTGCTGGATTGCAATAATCACAAGTGCGAGGAAATATGTCACCCAAAGAGTTGCGCTCCTTGCGTTCTCAAGCCGGAGACCGTGACGCACTGCTGCTGCGGACAAACTGCTTTGACCATCAAGAGGGAAAGCTGCTTGGATGCCATCCCGACTTGCGACAAAACGTGTTCAAAACGGTTGAAGTGCGGTCAACCAAACAATCCTCATACCTGCCAAGCAAACTGCCACGTGGACGACTGTCCCGACTGCGAATTGATAACTAAAGTCAGATGCCGTTGCGGCCACATGGACAAGGAGATCCCTTGTACCGAATTGAAGAGCAAAGCCGACGATGCTCGCTGCGAAAAGAAATGCTCAAAGAAAAGGTCCTGTGGAAAGCACAAGTGTAACCAAATGTGTTGCATCGATATCGAGCACATGTGCCCTCTGGTGTGCTCCAAAACCCTGAGTTGCGGGAAACACAGGTGTGAGCAGACGTGCCACAAAGGCAGGTGCCAGCCCTGCTGGCGCAGCAGCTTCGACGAGCTGTACTGCGAGTGCGGCTCGGCCGTCATCTACCCGCCCGTCGCTTGCGGCACTCGTCGGCCGGCCTGCGACAAGCCCTGCACGCGCGAGCACCCCTGCGGGCACGAAGTCCTGCACAACTGTCACAGCGACGCCACCTGTCCGCCCTGCAGCGTCCTCACGCAAAAGTGGTGCTACGGCCGCCACGAGCTCCGCAAGGCCGTCCCTTGCTACGTGAACGACGTGTCCTGCGGCATGCCCTGCGGCAAGCCTATATCCTGCAACAGGCACAAGTGCATACACTCCTGCCACTCGGACGCGTGCGAGAAGCCCGGACAGGTGTGCGCGCAGCCCTGCACCGTGGCTCGCGAGATCTGCGGCCACAACTGCGCTGCCCCCTGCCACGACGGCAAGTGCCCCGACACGCCGTGCAAGGAGATGATCAAGGTGACGTGCCAGTGTGGCCACAGGACGACCCTGCGCGTGTGCGCCGAGAACGCGCGCGACTACCAGCGCATAGTCAGCGGCATCCTGGCCAGCAGAATGTCGGACATGCAGTTGGGCCACTCGGTGAACCTCGAAGAAGTCTTTGGGCTGAACGCGCGCAAGCAGAACCAGCTCAAGACGCTCGACTGCAACGACGAGTGCAAGACAATCGAGCGCAACCGGAGACTGGCCCTCGGCCTGCAGATCGTCAATCCCGACCTCAGCGGCAAGCTCACGCCCAAGTACAGCGAATTCATGAGGCAGTGGGCCAAGAAGGACCCGATCTTCTGCCAGATGGTCCACGACAAGCTGACCGAGCTCGTGCAACTGGCCAAGACGTCGAAGCAGAAGTCGCGGAGCTACTCGTTCGAGGTCATGAACAGGGACAAGAGGCAGTTTGTGCACGAGTCGTGCGAGCACTTTGGCTGCGAGGGCCATGCGTATGATCAGGAGCCGAAGCGCAACGTCGTCGCGACGGCTGTTAAAGATAAGTGTTGGTTACCGGGCGGGGGAAAaaggggcggagggggggaCGGGTGCCAATTAACGAGGCGGGGAAGCAAGGATTTCTTCACGctgaatttcaagaaaatagcGAAACCTCTTCCTGCTACGCCGAGGGTAGTCTCCCCATCGAGGTCTCCTGAACCTGAGATagattatttcaattacaaagGTTGA
Protein Sequence: MATWDGSYPDPDGPNYYVNSSDSQIPANIPAWDYYVPGPGNTYAQSQTNPYPIRRTMVFEQSAPGPAYYNHADEKTIPSLVPHVAANAESHSGNGMPAVFNKIHKVGNSEANVNTINNQLPCFYEDNRLAQEGSAHYYNKNNHHNSGKSKDTNKTYDMSNIVENSNLHATATEFVPNLNKKDRSTNVNAYTSSKTRMNNNYQKPEVNRDEQAVQSNNFFVKDYKHNDRKFENKRDADKRWRDNQTNGQYYRDDKKDYKPQNFKQHQNDRYSLNKNFNDKPRFTRSKKDDSESITSEANTELETADGRYDNSNPVETVDSSVKTDNTQTTMPRSAKNSRAMLNNYRDDRYERYNSRDPRDFRDWEPRDSRNSRDSRDPRDFRDRKNNYQEPNGYNRSNYNRDKYERRDNRTVAAENRSKDLTDWRQRPSDNSSKITLLKRSYNKKYEPDDAASQRERLTEQLNRGQLECLVCCESIRQSDYVWSCNNCYHVLHLKCVQKWATSSQDDTGWRCPACQNVTSKVPSVYLCFCGKTHNPEWNRRDIAHSCGETCGRPRAESNCVHKCTLLCHPGACPPCSAMVTKHCGCKRTSRSQKCSAGPMLQCDEICDRVLNCGLHRCKKQCHHGECEPCGEVVEQECFCGKHSREKTCVLDLPLLYSCENVCDKVLDCNNHKCEEICHPKSCAPCVLKPETVTHCCCGQTALTIKRESCLDAIPTCDKTCSKRLKCGQPNNPHTCQANCHVDDCPDCELITKVRCRCGHMDKEIPCTELKSKADDARCEKKCSKKRSCGKHKCNQMCCIDIEHMCPLVCSKTLSCGKHRCEQTCHKGRCQPCWRSSFDELYCECGSAVIYPPVACGTRRPACDKPCTREHPCGHEVLHNCHSDATCPPCSVLTQKWCYGRHELRKAVPCYVNDVSCGMPCGKPISCNRHKCIHSCHSDACEKPGQVCAQPCTVAREICGHNCAAPCHDGKCPDTPCKEMIKVTCQCGHRTTLRVCAENARDYQRIVSGILASRMSDMQLGHSVNLEEVFGLNARKQNQLKTLDCNDECKTIERNRRLALGLQIVNPDLSGKLTPKYSEFMRQWAKKDPIFCQMVHDKLTELVQLAKTSKQKSRSYSFEVMNRDKRQFVHESCEHFGCEGHAYDQEPKRNVVATAVKDKCWLPGGGKRGGGGDGCQLTRRGSKDFFTLNFKKIAKPLPATPRVVSPSRSPEPEIDYFNYKG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -