Care005515.1
Basic Information
- Insect
- Copidosoma aretas
- Gene Symbol
- ZFY
- Assembly
- GCA_030522625.1
- Location
- JAPYYV010003990.1:7667-16640[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 31 4.4 6.5e+02 2.2 0.0 7 23 128 145 115 145 0.85 2 31 0.15 23 6.8 0.1 1 23 151 174 151 174 0.91 3 31 0.067 9.9 7.9 0.5 1 23 187 210 187 210 0.97 4 31 10 1.5e+03 1.1 1.7 1 21 216 236 216 237 0.89 5 31 0.12 18 7.1 0.1 1 23 249 272 249 272 0.95 6 31 0.0047 0.7 11.5 0.2 3 23 287 307 286 307 0.92 7 31 3.7e-06 0.00054 21.3 1.3 1 23 325 347 325 347 0.98 8 31 0.0047 0.69 11.5 0.0 1 23 353 375 353 375 0.93 9 31 0.00042 0.062 14.9 0.8 1 23 381 404 381 404 0.97 10 31 0.0033 0.49 12.0 0.3 1 23 607 630 607 630 0.97 11 31 0.00055 0.082 14.5 2.3 1 23 636 658 636 658 0.98 12 31 0.033 4.9 8.9 2.5 2 23 668 690 667 690 0.93 13 31 0.03 4.5 9.0 1.4 1 23 696 718 696 718 0.90 14 31 4e-06 0.0006 21.2 1.0 1 23 723 746 723 746 0.96 15 31 0.19 29 6.5 0.2 1 23 752 774 752 774 0.94 16 31 0.00038 0.057 15.0 2.8 1 23 778 801 778 801 0.97 17 31 0.039 5.8 8.6 4.0 2 23 808 829 807 829 0.96 18 31 7.5e-05 0.011 17.2 1.3 1 23 835 858 835 858 0.95 19 31 0.13 19 7.0 4.1 1 23 1089 1111 1089 1111 0.98 20 31 0.077 11 7.7 1.3 1 23 1147 1170 1147 1170 0.95 21 31 1.5 2.2e+02 3.7 1.0 2 15 1208 1221 1207 1223 0.87 22 31 0.013 2 10.1 1.8 1 23 1235 1258 1235 1258 0.97 23 31 0.072 11 7.8 5.8 1 23 1271 1293 1271 1293 0.99 24 31 0.0028 0.41 12.3 1.4 1 23 1304 1327 1304 1327 0.97 25 31 0.18 26 6.6 1.6 1 23 1350 1373 1350 1373 0.96 26 31 0.00022 0.033 15.7 1.9 1 23 1379 1402 1379 1402 0.95 27 31 0.0017 0.25 12.9 0.8 2 23 1408 1430 1407 1430 0.94 28 31 0.028 4.2 9.1 1.3 1 23 1435 1458 1435 1458 0.96 29 31 1.4e-06 0.00021 22.6 4.7 2 23 1466 1487 1466 1487 0.97 30 31 8.7e-07 0.00013 23.3 0.2 1 23 1493 1515 1493 1515 0.98 31 31 1.3e-06 0.00019 22.7 0.1 1 23 1521 1543 1521 1543 0.98
Sequence Information
- Coding Sequence
- ATGCAAGACCGGGAGCCCGACTCGACGACCAAAGACGtcggcggcggcgacgacgtcGAGGCaccaacaacaacgacgacaagGTCGGACGAGAAACAGGACCCCGGCCTCCTCGATGCTCCGCTGGTGCTCAGCCGGCCGCTGCCCTCCTTCTACCTGAGCGAAACTAAAACCCAGAGCGACGAGCCGGTCCCCCCCGTCACCGTCAAGCCAGATCCCGCCAACGACGACGCCGACGACTTGAAGCAGCAGCTCGCCGCGATCGCCGACACCCAGAGCAACGAGGACCGCGACAACCTCATAGAAAAACTCGGGCTGCACAGCACCCTGCCCGACGGCAGTTACGCCTGCGAGCTCTGCGCCGCCAATCCCAACGTACGGGACAAGGCCTTCGCCACGAAGCCCGACGTCGTGCGCCACCTGATCCGCGCCCACGGCCGCTGCCACGAGTTCGAGTGCCCGCGCTGCGTCTACTCGTTCCAGCTGCGGGAGTCCCTGGCCGTCCACGAGCTCGAGCGCCACTCGTGCTCGGCCGCCGAGGACAAGAGCCGCTTGTACTACCAGTGCGCCAAGTGCGAGTACCAAAGCTCGGACGAGCAGCTTCTACGGCTGCACGTGCTCAGGAAGCACGCGAAGGAGTTCGGCTACGTGTGCAGCTGTTGCGCCCGGTGCTTCAGGACCTGGATCGCCAAGAACGAGCACGAGCGGGCCCAGCAGCCGAATCGCTCGAGGCCCAAGCCCAGGTACAACTGCGACAGTTGCGGGGAATTCTTCGGCACGAGGCTCGTGCTGACCGGCCATCTCAGGGACGCCCACGGCCTGGACTGCGAGAGGGACGGCCCGGTGGTGCTGAGGAACTGCGAGCGCTGTCCCAAGATCTTTATGACGCAGGCGTCGCTGCGGGCCCACGAGGACGAGCACCAGCGGGAGGCCAAGCGAAAGCTCCTCAGCCAGTACAACGACACGACGGGCTACCCCTGCGACGTGTGCGGCAAGTTTTTATCGAGCAAGGACCATCTGAGAAAGCACGAGCGGGTGCACACCGGTGAGCGACCTTTCTCGTGTCCCGAGTGTGGGAAGGCCTTTGCTctggtgatgacgatgaagatacACGCCCTCTCTCATAGCGGCATCAAGCCGTACGTCTGCAGGATCTGCAAGCTCAAGTACTCCCAGCGCTCGGCCCTCATGATACACTGGAAGAGCAAGCACAAGGGCCTACCGTCCCCGCCACCCATCGAGATCCACCAGTACTTTGACCGCTACGGGAACGTCGTGGCTCGCCACAAAGAGATATCGCTAGACAAATCCAAAATACTCGGCAAACTCGGCCTAAAGAGAAAATCCTCCGAACCTTTAGAAATGTCAACGAAAGCTTCGACCAACAAAAAAGGGGCAGCATCAACCCCGAAGCCACCTCCCAGTAAGAAAGCCAAACCCACTCCGGCTAAAAAATCAACTCCCGCGCCGGCCAGAAAAACCAAGGTTACTTCGGCCAAGAAATCTAAAACCATTACATTCAAGAAACCCAAACCATCACCACCTAAAAAGTCTAAACTGTCTCCAACCAAAAAGTCGAAACTGTCTCCAACCAAAATGTCTAAACTGTCTCCAACCATTAAGTCGGAACCTCCTtcgagtaaaaacaaaaaatccaaacccACGCCGAAAGTCAAGAAGACTCCGGAAAAATCGACAAACTCCACGGGCAAAAAATCGTTCTCGAAGATGCTGGAGCCCAACACGATTTTAACCGAGTGGTCGGGCAGCATTAAGCTGTCGGGGGGCGTTCCGTGGAGAAAACTAGACAGCGGTCACTTTGCCTGCAATGTCTGCCGGCAGGTGTTCGTCCTCTACCAGCAGGTGAAGCGCCACATAAATACGTGGCACTTTCCGCCCGCTCTGTACCACTGCGACTACTGCAGTAAGATTTACAAGTCCAAGTACTTGTTAGGCGAGCACATAAACTCCCATCGCGAGAACAGCAGCGATTACCTGTGGTGCTGCGACAAGTGCGACTACAGGGCCAAGTCCAAGTACTACCTGAAGGTGCACCTGGTGCGCAAGCACACCGACGAAGCCCCCTTCGAGTGCGACATCTGCAAGAAACGCTTCAAAGTAAAGAACGACATCAAGTTCCACCTGGGCACGCACAGCGACTCCCAGCATATGTGCGACATCTGTGGCCGCATGTACACGAGCAAGGACTCGCTGGTCAAGCACCGCAGGGTCGTCCACGTGAACACTTACAATTACCGGTGCCCAATCTGCAACCAGAAGCTCCTCACCGAAAAGGCGCTGAACGATCACGTGGTTAAACACAAGGATCAGTACAGTTGCGACGAGTGCGACCTCAAGTTTACGAAAAAGTACTACGTAACGCGGCACAAGAAACGCGTCCACAGGGTCGAGAAAGCGATCGAGTGCCACATATGCAACAAGACCTTTGTCTGCATGTCCACGTACAGGATTCACTACCTCACGCACGCCAAGGTCAAACCCTACCTGTGCAACGTGTGCGGCTACAGCTTCACCCAGCGGTCTTCGATGATGCTGCACTGGAAGAAGAAGCATCCGGACGCGGGTAAACCACCGCCGCCGGTGATGCTCACTAACATCTTTGGGGACATAGAATCGAAGGTTAACGAGCTCCAGGAGACCAACGAAGTGCATATTCCCAAGAGAAAGACCAGGCGCTCGAACGCGCCGGCCAACAAAACCGTAACTTCGGCGGTCAATGAGACTAGTGTACTAGCTAGTGATATACCGATTAGTGATCATATTGTGGAAGTTGAAACTACACCGAGCAGTTCTATCGTCATGCCATCCGAATACAGTCCGACTCATGCTAACGTTACACCCATCACTTATCCCCTGGCTCTTGCTAGCGTCACGGCTACCTACACACCGACTGTTCCAGCAGCTGATTTCACGCAGCCCGATGCTAATGTCACACCAGTTGATTTCACACCCGCCGATGTCAACGCTACACCAACCATTTACACGCCGAATAGTGATAATTCTGTACCAACTGCTTATGTCAATACACAAGCACAAACCAACGCAAACATCACGCCGGCTAATTACACACCCACTTCTGCTAATAATTACATGGGATTCAGGTGCTCCGAAAGCAGCAGCAGTCAGCCAACCGAAAAGAAGCCCCCGATGACGCTCTACAAGATAAACTACGTTGGCGGCAAGACGAGTTACTCTCTGGTCCCGTTAGATCTCCAGGGTAAAGTGAAAGTCGTAACGAACCTCTTCAAGTGCGTGGAGTGCAAGCTCGTCTTTGCCTCGCAGCACAGGCTCACGTGTCACCAGGCTACGCACACACCGCTAAAAAAGCAGATGAAACAGCCGGTCAAACGAATGGTCCAGGGAAAGAGTGTCGCCAAGGGAGTGAAGAATGAAGATAAAAGTGAACAACAGTCGACCTACAATTGCCCGTCGTGCAAATACAGCACAAACAGGCGGGACGCAATGGTCAGCCACTACACAAAGACTCACTTGGCGAAAAATAGAGCCGAGTTAGAACAGAGTACGGTGGTAAAGGTCGAGGAGGCGAGAGCCGCAAATGAACCTGATGCGGAAGAAACAAAACCCGAGTCGGTACAACTGGTGTGCCCGACGTGCGGCTTCTCGTGCAAGGACCAGGTGGACTTTGACTTCCACAGCTGCCAGTCCAAGGATTCAACTATGTTCAGCTGCCCGACCTGCACCTTCGAGTGCCCCACCCGCGTTGGTCTGAACAGCCACATGTCGCGCAAGCACAAGCAGTCGAACCTGGTCAGCGACGAGAAGCGCACCTACGAGTGCGAGTCGTGCGACTACAAGTGCACGAACCGGCGGACAATGTACTCGCACAGGCGCCGGCACAAGGACGGCGAGCCGGTCGCGGTGCCCAAGTACTTCTGCAACGAGTGCGACTTCAAGGCAAGGTCCAAGAGCGCTCTGTTTCTGCACATACAGAGGAAGCACAGGCCCGAGGGTCAAGAGGTGGGGGTCGTGATGAAGCCGCCACCAGCCTCGCCCAGGCCGAGCTTGTACAAGTGCGACCAGTGCAACTACACGAACAAGAACAGGTACGAGGTGAAAATCCACGTGATACGCAAGCACAGCGAGGAGTACAACCACGAGTGCGAGACCTGCGGCAAGAAGTACAAGATCCGGGGCGACCTGACGAACCACATTCGCTTCCAGCACAAGGAGAAGCAAGTCATGTGCGAAGTGTGCGGCAAGACCTGCGGCAACAGCAACTCGCTCTACGTCCACCAAAAGTTTGCCCACTACAAGCCAGATTTTGAATGCCACATTTGCCACAGGCGTATGGTCAGCGAAGTCAATCTCGCTGAACACGTTTTGAAGCAGCACGAACAGCGGCGTGACGACGCCGTTTGTCACGAGTGCGGAAAGACCTTCACCAGGCACAGCAGACTGAAGATCCACATGAGGGTGCACACGGGCGCGAAGCCGTATCCTTGCAAGATATGTGGAAAAGCATTCAGCAGGACTACGGCGCTCAGGCAGCATCTACTGATACACACAGGAAAAAGGCCGTACGTATGCGACATATGCGGGAAGGCTTTTACACAGAAACCGGGGCTGATTAGTCACAGGAAGTCTCATCCAGGATCGCATGCGCCCCTGCCCAGAGTTACTATTGATCACGTGCTTGAACTGCTCAACGATACGtag
- Protein Sequence
- MQDREPDSTTKDVGGGDDVEAPTTTTTRSDEKQDPGLLDAPLVLSRPLPSFYLSETKTQSDEPVPPVTVKPDPANDDADDLKQQLAAIADTQSNEDRDNLIEKLGLHSTLPDGSYACELCAANPNVRDKAFATKPDVVRHLIRAHGRCHEFECPRCVYSFQLRESLAVHELERHSCSAAEDKSRLYYQCAKCEYQSSDEQLLRLHVLRKHAKEFGYVCSCCARCFRTWIAKNEHERAQQPNRSRPKPRYNCDSCGEFFGTRLVLTGHLRDAHGLDCERDGPVVLRNCERCPKIFMTQASLRAHEDEHQREAKRKLLSQYNDTTGYPCDVCGKFLSSKDHLRKHERVHTGERPFSCPECGKAFALVMTMKIHALSHSGIKPYVCRICKLKYSQRSALMIHWKSKHKGLPSPPPIEIHQYFDRYGNVVARHKEISLDKSKILGKLGLKRKSSEPLEMSTKASTNKKGAASTPKPPPSKKAKPTPAKKSTPAPARKTKVTSAKKSKTITFKKPKPSPPKKSKLSPTKKSKLSPTKMSKLSPTIKSEPPSSKNKKSKPTPKVKKTPEKSTNSTGKKSFSKMLEPNTILTEWSGSIKLSGGVPWRKLDSGHFACNVCRQVFVLYQQVKRHINTWHFPPALYHCDYCSKIYKSKYLLGEHINSHRENSSDYLWCCDKCDYRAKSKYYLKVHLVRKHTDEAPFECDICKKRFKVKNDIKFHLGTHSDSQHMCDICGRMYTSKDSLVKHRRVVHVNTYNYRCPICNQKLLTEKALNDHVVKHKDQYSCDECDLKFTKKYYVTRHKKRVHRVEKAIECHICNKTFVCMSTYRIHYLTHAKVKPYLCNVCGYSFTQRSSMMLHWKKKHPDAGKPPPPVMLTNIFGDIESKVNELQETNEVHIPKRKTRRSNAPANKTVTSAVNETSVLASDIPISDHIVEVETTPSSSIVMPSEYSPTHANVTPITYPLALASVTATYTPTVPAADFTQPDANVTPVDFTPADVNATPTIYTPNSDNSVPTAYVNTQAQTNANITPANYTPTSANNYMGFRCSESSSSQPTEKKPPMTLYKINYVGGKTSYSLVPLDLQGKVKVVTNLFKCVECKLVFASQHRLTCHQATHTPLKKQMKQPVKRMVQGKSVAKGVKNEDKSEQQSTYNCPSCKYSTNRRDAMVSHYTKTHLAKNRAELEQSTVVKVEEARAANEPDAEETKPESVQLVCPTCGFSCKDQVDFDFHSCQSKDSTMFSCPTCTFECPTRVGLNSHMSRKHKQSNLVSDEKRTYECESCDYKCTNRRTMYSHRRRHKDGEPVAVPKYFCNECDFKARSKSALFLHIQRKHRPEGQEVGVVMKPPPASPRPSLYKCDQCNYTNKNRYEVKIHVIRKHSEEYNHECETCGKKYKIRGDLTNHIRFQHKEKQVMCEVCGKTCGNSNSLYVHQKFAHYKPDFECHICHRRMVSEVNLAEHVLKQHEQRRDDAVCHECGKTFTRHSRLKIHMRVHTGAKPYPCKICGKAFSRTTALRQHLLIHTGKRPYVCDICGKAFTQKPGLISHRKSHPGSHAPLPRVTIDHVLELLNDT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -