Care004995.1
Basic Information
- Insect
- Copidosoma aretas
- Gene Symbol
- Snapc4
- Assembly
- GCA_030522625.1
- Location
- JAPYYV010003510.1:7664-10332[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 0.0058 12 7.2 0.0 14 43 230 264 223 267 0.78 2 5 1.3e-10 2.6e-07 31.7 0.3 1 44 273 318 273 320 0.96 3 5 9.9e-07 0.002 19.3 0.1 2 43 328 373 327 376 0.96 4 5 2.4e-11 5e-08 34.0 0.0 1 44 382 426 382 427 0.92 5 5 5.9e-10 1.2e-06 29.6 0.0 1 43 437 479 437 482 0.87
Sequence Information
- Coding Sequence
- ATGTCGAGTGACAATGAAGATAGTGAATTGCTCGAAGAGCTTGAAGCTTTGAAACGAGCATTGGAGTACAAAAGAAGTTTGAACAAAAATCAGTCTGATTCAAGTAATGTGATTTCACATGAAAATTCATCGTCTCAGGcagaacaaagtttttttgaaaataaagaacaaCTCGCCTTGCATAACGATGAAGATATTTCAGAAGAAAAAAGTGATAGCTCGAGTGTTAACAATTATAGTGACTACAATTGTGAAAACTTACAAGACTTGTTGGAGCTCAATAAGAAATTATCGGATACATTGGCAAGCTCCCGTGAGGAACTGCAGTCCATGCTCGAAGAGTGCACAAAAAGAAAACAGACAGTGACAAATGAAATTGCCAAACTATCGTCCAGCAAGAGAAATAAAATTCTTAGCTTTAATGCTGGCATGCCCTActtcaaagataaaaattactacaCAGCTAAGATGAACGAAGACACtgcaactaaaataaaaaatggtgaGTTGCGCTTGGCTCAGCTACAGCGGATTCAACGTTGGAACCAGGATGACAAGACTAGTCTATTAAAAGCTATATGGCACGAGGTTGCTTTGACTTTGTTAGACGATAAAAACAGTGATCCTGATGAAAGTTACATTTGTGATGCTATCAAAAAGTCAAGTCAACTACCTCAAGATGTCAAAGAGGCTATTGGATCTCTGGGGGCAATGAATTTCGACTGGCTAAAGATCGCCAAAAGCATGCCGGACCACAAGCACAGCGCAGAAGAATGCGAGGTCATGTGGAATGTTTTTCTGCATCCGgatataaacaaacaaaaatggaCCGCCCAGGAGGACAAAGATTTGAATCAGATAGTTGCAGATCACCATTTTCAAAATTGGAATGCCATTGCCAAAGCTTTAAAAACCAAACGTAGTGGTTACCAGTGCTTTATTAGGTTTAATACGAACAATTGGAAGAATCTTATGAAGGGTCAGCCGTGGACGCCGTCTGAGGACAGAAGTCTTTGTTATCTTGTAACAAAGTTGAGGGTTGGCGATTACATTCCATGGGGCTACATTGCTAGCTGTATGAACAATTGGACAAAACAACAGGTGTATTTTCGTTGGATGTACAGCTTAGCGCCTCACTTAAAGAAGGGCAGGTTTTCAGCTGCCGAGGATGAAGAACTGCTCAAGGCAATCGAAAAGTATGGTTTCAACTTCAGTAAAATATCCGCTCTAGTCATGACCAAAAGAACGAACATCCAGCTGAAGGAGCATTACCAAACGCTATGCGCGAAATCCAAAATCGACCAGGGTAAGAAAGTCTGGACCTATGAGGATGACGCTAAGCTGCTCGAGTTGTACGAAAAGTACGGCGCCAAGTGGGCGAAGATTGTCGAAGCGATCCCGGGTGTCTCTAGAATACATGCAAGGTTGCGCTTCGCCACTCTCATGCGCTTCGACAAGAAGGGCATAAGCTTGAATAACATCGACCGAGGAGTCCTCGCAAGTCAACCAGCCCATACGACCGTCACCTACACCACCAACACGCCCTGGTCCAGGGAGAACAAGGAGATCCACGTCACTCACCTGAAGACCGACGATCAGCTGGTCAACTTTTTTAAGCGGGAGAACGCTAACAAGGACAAGAAATCGAAGACGTACTTGCCCGAAAAACTGGCCATCGACACCAAAAAGCTGTACGACACGCTCGTCAAATTGAACGTGGACATTAGTCTGCCCGAGTACGTTGAGGATAACGGCGAGATCAGCGAGATGTACCTCCAGTTGCTCGTGTCGCTGCAAGATTACGCGGAAGATCGGAAGAGAAATCTCAGTAGTGAGATCGAGAGCGTCAGGCTGAGGATGTTCGGGCCCCAGGAGCCACTTCCCGAAAACGAGCGGTTCATCCCCCCCTTGCCTTTCAACTTCTGCCCTCCCAAGAGGTTCGCCTGGAAGAAAAATCCCAATGACTACGATCTCTCCTCGGTCAACAAGGAAACCCACCAGGTCCAAGTGGCAATGGAGTGTGTGCCGTGTAAGGAACTGGGGGAGGACTTGGAGAGGCAGTTCGAAAAAATCAAGGAAATAATGGTTGCCCCAATCAGCTCCTCGCCAAAAATCTACTCGCTGAGGTGCAAGTCGTTTGCTACGTCCAACTCGTTTTACGCTAACTTGGAGATGAAGTACGACTGGAAGCAGAACAAAATAGTCCCGACTCAGTGGAGCAACTTGATTCCACACGAAATACCGATGTCGGACGCGGACGGTGTTCCCTTGTCGCTGTTGGAACCCAGCCGCCAAACGCTGGCGACTTATCAGGAAGTCATATTTGCCTCCTCGGAATTCCCCTCGGAGTCTGAGAGTACTGGCAACTCGAGCATCAGTCTGTCGGCGCGGGGTCAAAGAGCTATGATAGTATTCAAAAGACGCTTTCAGCAGTTGTTCCACATGCCTATCTGTTTGTCGAGAATCATACCGCCGGATATCGTGGACGAGAGTTCGTTTTTGCCAGCGATTGAGAAGCTGAagaagaaacaaacaaaaaagaaagggGTCCAGAAGAAAAGAATGAAGGGTATCATCAAGCAGTGTCCAAATGACGAATGA
- Protein Sequence
- MSSDNEDSELLEELEALKRALEYKRSLNKNQSDSSNVISHENSSSQAEQSFFENKEQLALHNDEDISEEKSDSSSVNNYSDYNCENLQDLLELNKKLSDTLASSREELQSMLEECTKRKQTVTNEIAKLSSSKRNKILSFNAGMPYFKDKNYYTAKMNEDTATKIKNGELRLAQLQRIQRWNQDDKTSLLKAIWHEVALTLLDDKNSDPDESYICDAIKKSSQLPQDVKEAIGSLGAMNFDWLKIAKSMPDHKHSAEECEVMWNVFLHPDINKQKWTAQEDKDLNQIVADHHFQNWNAIAKALKTKRSGYQCFIRFNTNNWKNLMKGQPWTPSEDRSLCYLVTKLRVGDYIPWGYIASCMNNWTKQQVYFRWMYSLAPHLKKGRFSAAEDEELLKAIEKYGFNFSKISALVMTKRTNIQLKEHYQTLCAKSKIDQGKKVWTYEDDAKLLELYEKYGAKWAKIVEAIPGVSRIHARLRFATLMRFDKKGISLNNIDRGVLASQPAHTTVTYTTNTPWSRENKEIHVTHLKTDDQLVNFFKRENANKDKKSKTYLPEKLAIDTKKLYDTLVKLNVDISLPEYVEDNGEISEMYLQLLVSLQDYAEDRKRNLSSEIESVRLRMFGPQEPLPENERFIPPLPFNFCPPKRFAWKKNPNDYDLSSVNKETHQVQVAMECVPCKELGEDLERQFEKIKEIMVAPISSSPKIYSLRCKSFATSNSFYANLEMKYDWKQNKIVPTQWSNLIPHEIPMSDADGVPLSLLEPSRQTLATYQEVIFASSEFPSESESTGNSSISLSARGQRAMIVFKRRFQQLFHMPICLSRIIPPDIVDESSFLPAIEKLKKKQTKKKGVQKKRMKGIIKQCPNDE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -