Care000534.1
Basic Information
- Insect
- Copidosoma aretas
- Gene Symbol
- retn
- Assembly
- GCA_030522625.1
- Location
- JAPYYV010000262.1:28500-36446[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.5e-19 8.4e-16 59.2 0.0 17 89 18 88 15 88 0.95 2 2 5.8 3.2e+04 -3.5 0.0 4 13 213 222 212 236 0.66
Sequence Information
- Coding Sequence
- ATGCAAAAACCCATCCCAGAAcagcccggtgtattgcccaagttcggACTAGGTTCGCCTATTAATCGGTTACCAATAATGGCTAAGTCAGTGCTCGACCTGTATGAGCTGTACAACTTGGTGATTGCTCGGGGTGGTCTCGTCGACGTCATTAACAAAAAGCTCTGGCAGGAAATAATCAAAGGTCTTCACCTCCCTTCGAGTATAACTTCGGCTGCTTTCACGTTGCGAACTCAATATATGAAATACCTGTACCCGTACGAGTGCgcgaaaaaaaatctgtcgaCACCTGAAGAGCTGCGAGTGGCCATCGACGGTAATAAGCGGGAAGGCCGACGGAGCAACTACGGGACTTACGGAACGAACGGTGGACCGGGCACGCCCATGCACGAGGCCCTCACTCACCAGCACAGCGCCCACACCCCGAACAGTCTCGCATCCCACTTGCACGGCCAGCTGTCGCCCCTATCGTTGGTCACGGCTGTCCAGCAGGCGGCCGCCGGTGGTCAACACCAAGCCCTCCACAACGGCAGCGCCGCCCACGTCCCACTGGCGCACCACCCACACCACCCCCAGCACCAACAGCCCGGCATGATGCAGCTACCGAACGCAGGCATAGACCCAGAGATGTTCAGCGAGTTCATGAAGCAGCTGCAGCGTGACTTCAGGCGCACAGTGCCTACACCGTCGAGGGGGGACAGCGTGTCACCACCGCCGCAGCGGTCGTCCCCATCCCGTGAGCAGGCCGCCCTCCAGCTCGAAATGTCGCGCTTCAACCTCTGGAACAATTTCTACGCCGGCAACGTGCAGGCGAGTCTTGGTTATCCGGTCCAGTCTGCTTCACCGCCGCGGACGGGCTCACGCTCTCCGCTCGTTCACATCGAGAGCCCCGAGCCGCAGCGTGAGGCATTGGACCTGGGCATCAAGTCTTCCTCGAGCGTATCCTCGCACGGACAAATCAGCCCAAATCCCTCGCACACCGGTAGCAGCATGGCCATCAAGCGCGAATTGGAGCGCGACTCACCCCCGAGCACCCAGGCACCGACCAAGCGACCGCGTCACGCCGCTGAGCCAGCTGCGGTCCCGGACTGCGCCGAGGACGCCCCCTATGAACCCAATGGCGGCCCTCTGCAGCCCAATACGCACATCAAGATTACAAATAGAGGTAGTGTAACTATCAATGTATTAATTAGTGTGGCAGCGCCACGTTGCCACAGTGGGACAGAATAg
- Protein Sequence
- MQKPIPEQPGVLPKFGLGSPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECAKKNLSTPEELRVAIDGNKREGRRSNYGTYGTNGGPGTPMHEALTHQHSAHTPNSLASHLHGQLSPLSLVTAVQQAAAGGQHQALHNGSAAHVPLAHHPHHPQHQQPGMMQLPNAGIDPEMFSEFMKQLQRDFRRTVPTPSRGDSVSPPPQRSSPSREQAALQLEMSRFNLWNNFYAGNVQASLGYPVQSASPPRTGSRSPLVHIESPEPQREALDLGIKSSSSVSSHGQISPNPSHTGSSMAIKRELERDSPPSTQAPTKRPRHAAEPAAVPDCAEDAPYEPNGGPLQPNTHIKITNRGSVTINVLISVAAPRCHSGTE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -