Basic Information

Insect: Contarinia nasturtii
Gene Symbol: stc
Assembly: GCA_009176525.2
Location: NW:3920993-3925573[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 1.4 9.9e+03 -3.7 1.1 15 18 370 373 369 374 0.81

2 16 0.16 1.1e+03 -0.6 0.3 4 10 430 436 429 438 0.93

3 16 9.6e-05 0.66 9.7 16.1 4 19 444 459 436 459 0.88

4 16 3.5e-07 0.0024 17.5 10.6 1 18 495 512 495 513 0.97

5 16 0.81 5.6e+03 -2.9 0.5 7 11 517 521 517 521 0.88

6 16 3e-07 0.0021 17.7 11.6 1 18 553 570 553 571 0.94

7 16 5.3e-06 0.037 13.7 13.3 4 18 619 633 612 634 0.86

8 16 2 1.4e+04 -4.5 2.0 5 10 663 668 663 668 0.91

9 16 0.02 1.4e+02 2.3 8.2 1 11 674 684 674 685 0.95

10 16 0.71 4.9e+03 -2.7 0.9 4 10 689 695 688 695 0.89

11 16 7.7e-10 5.3e-06 26.0 12.3 1 18 701 718 701 719 0.97

12 16 2 1.4e+04 -4.1 1.6 15 18 748 752 747 753 0.50

13 16 0.27 1.9e+03 -1.3 8.4 10 18 766 775 755 776 0.86

14 16 7.6e-08 0.00053 19.6 8.8 1 16 812 827 812 834 0.90

15 16 0.031 2.2e+02 1.7 9.6 4 18 846 863 844 864 0.83

16 16 0.59 4.1e+03 -2.4 0.1 8 12 880 884 879 884 0.80

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	1.4	9.9e+03	-3.7	1.1	15	18	370	373	369	374	0.81
2	16	0.16	1.1e+03	-0.6	0.3	4	10	430	436	429	438	0.93
3	16	9.6e-05	0.66	9.7	16.1	4	19	444	459	436	459	0.88
4	16	3.5e-07	0.0024	17.5	10.6	1	18	495	512	495	513	0.97
5	16	0.81	5.6e+03	-2.9	0.5	7	11	517	521	517	521	0.88
6	16	3e-07	0.0021	17.7	11.6	1	18	553	570	553	571	0.94
7	16	5.3e-06	0.037	13.7	13.3	4	18	619	633	612	634	0.86
8	16	2	1.4e+04	-4.5	2.0	5	10	663	668	663	668	0.91
9	16	0.02	1.4e+02	2.3	8.2	1	11	674	684	674	685	0.95
10	16	0.71	4.9e+03	-2.7	0.9	4	10	689	695	688	695	0.89
11	16	7.7e-10	5.3e-06	26.0	12.3	1	18	701	718	701	719	0.97
12	16	2	1.4e+04	-4.1	1.6	15	18	748	752	747	753	0.50
13	16	0.27	1.9e+03	-1.3	8.4	10	18	766	775	755	776	0.86
14	16	7.6e-08	0.00053	19.6	8.8	1	16	812	827	812	834	0.90
15	16	0.031	2.2e+02	1.7	9.6	4	18	846	863	844	864	0.83
16	16	0.59	4.1e+03	-2.4	0.1	8	12	880	884	879	884	0.80

Sequence Information

Coding Sequence: ATGGCAAactgcaataataataatcgaaaagGTGGATATTTTGATCAGTACGTAAACTTCGACCAATTTCTCATGCAACACAACATCAACAATTGGTCACCGCATCGTGGCTCCGATAACCGTAGTTATGGTGGATTCAGTCAAGATCCATACGGTACATCAAATAATGGATTTCATTTCCAATCACAACACAATGGACCATCGATAAGTGGTGATTATCGTCCGCCAACCGATTGGTTACAAAGTTCGAATTTAACAGTCACTGCATCAGAATTCGTACCACAAACTACAACATCAAGCACATCAACGTTATTACCCACagcaaatgaatttgttcCGAAAAATTCGCCAAAATCGACAGCAAAAGAATGTTCATCACTTAACAAGCAATCGAACACTGTCGTATGTGATAAGGATAAAAATGACAGAATAGCACCTAAAGATGAAAATGCATCTAAAACCGATTCCGTGATACAAGCattaaacaaaacacatattACCGATGATGCAACCAGACCGTTGCATAGCAGTGGTGGTGCCATCAAAAAGGTTCGCAATCAAGATTATCGTGATACGGATTCAAGAGATCGACATTCAAACGGCAATCTTCACGCCAAGAAAAAGCGCCAAGAGCGATACGATGATTATCGTCGACGTGTAAACGAGAGCAATCGCCAGAACAGTGGTCGAGCCACAAAATACGATAGTAATCGAAATTACAGGGGTAAAAATGAGACTTGCGAAGAAGATTCATcgacaaattataaaaaacgaaatcaacgttacaataacaataataaaggTAGTAATAACAATATCAATGGCAATTCCAACCATGGTAGCGGTTATTTTGAAAACAGCTCCAAATCGAAATTGGATGAACAATCCGAATCAAAAGatcgaaacaagaaaaatgataaGTACGAACCGAAAGATCGTAAACGATATGATGCAAAGCCAAATCAACGAAATGGCAAAGCGAAAGGCATTAAAATTGACTCAGTCAATTGTTCGCAACGTGAAAAATTAAGCCGTGAAATCGATGGTGGCCGCTTGGAGTGTCTAGTATGCTATGACATAATTAAGCCGTACAATTCTGTGTGGTCGTGTCCCAATTGCTATCACATATTGCATCTGAATTGCATCATCAAATGGGCCGAATCGTCAAAATCCGAAGAAGGATGGCGATGCTGTGCTTGtcaaaatatatcgaaaactCTACCTCGTGAATATTATTGTTTCTGcggaaaagagaaaaatccaCAATATAATCGAAACGATATGGCGCACAGTTGCGGCGATGTATGCGGTCGAAGTGAAAATTGTCCACATCCATGCACAAATCTTTGCCATCCGGGGCCGTGTCCGCTTTGCCAGGTGATGGTAACACGACAATGCTGCTGCGGTAAAACCTCGAAAATGTATCAATGCAATCAAAAGGTTGAATTCAAGTGTGATCAACAGTGTGAAAAAGAGTTAAATTGTTCGGTGCATAAATGCGAAAAATCGTGTCATTCGGGTGAATGCGAAGATTGTGCAGAAGAAATCGAACAAACGTGTCACTGTAAGCGTGAAAAACGAACGGTTCCAtgcacaaaagagaataaagaATCGTTAACATATTCATGTGGCCAAGTATGcgataaacaattgaaatgcaacaaTCACAATTGTAAAGAACTATGTCACGAAGGCGAATGCAAAGACTGTGAATTGCTTCCGGAACTGGTTAAACATTGTCCATGTGgcaaaatgcaaattgaaaaagacaAGCGAACAAGTTGTATGGATCCAATACCATTGTGCACATCAAATTGCAAGAAACGATTGACCTGTGGTCAACCAAGCAATCCACATGCGTGTAATAGTAAGTGTCATTTCGGACCGTGTCCACCGTGTAACAAACAAACGGCCGTCAAATGTCGATGCGGTAACATGGATCAAATGATTAAGTGTTCACAACTTTCGACCAGAGCGGACGATGCACGTTGCAAGAAAAAGTGCACAAAGAAACGAAATTGCGGCAAACACAAGTGCAACGTGGAATGTTGTATCgATATCGATCATGAGTGCCCATTGaaatgcacatacacactgTCATGTGGCAAACATAAATGCGAATCAACATGTCATAAAGGACGTTGTTTACCTTGTTATCGAAGCTCATTCGACGAATTGTATTGTGAATGCGGTCATAACGTCATTTATCCTCCAGTTCCTTGTGGTACAAAGCGGCCACCTTGTGATCGACCATGTTCACGCCAACATGCATGTGATCATGAAGTTACTCATAATTGTCATTCAGCACAAAACTGCCCGCCATGTATGGCATTCACACGAAAATATTGCCATGGCCGACACGAACAACGAAATATAATCCCTTGTAGTCAAAAAGACTTCAGTTGTGGTTTACCATGTAATAAACAGTTAAAATGTGGTCGTCACAAATGCATAAAAACCTGTCACGCTGGTCTATGCGAAACTGAAACGGATGTGTGCAAGCAGAATTGTACAAAACCACGTCTAATGTGTCCGCACAATTGTAATGCACCTTGTCATTTGGATTCTCCATGTCCGGACATGGCCTGTCGCGAAAACATCGAAGTATCATGCCAATGTGGTTTACGTAAACAGACACGCACATGCCATGATTTCTCATCGGATTATCGAAAAATTGCCACTGCCACATTGGCCTCAAGCATggaacaaatgcaaaatggtGGAACTATTGAGCTCAGTGATGTCTTGGGACCGATCAAAActacaaacaacaaaacgcTTGAATGCAATGAAGATTGTCGTGTAGCTGAACGCAATCGACGATTGGCAATTGGTCTTCAAATCAGAAATCCTGATCTTCCATCGAGACAACCCAAGTATACTGAATTTAGTCGTGGATGGGCGAAAAAAGACCCAAAACTTGTATCAATGATACATGATAAGTTAACAGAATTGGTTAAATTAGCAAAAGatagcaaacaaaaatctcGAAGCTACTCGTTTCCAACGATGAACCGCGAAAAACGCCAACTAGTACATGAAATGTGCGAAATGTTTGGCGTTGAAAGCAAGGCATATGATGCAGAACCGAATCGAAATGTGGTAGCAAGTGCGAATCGTGCCACTTCATGGCTACCATCGATGAGCATTTTGGAAGTAGTAGAACGTGAAAATGGTCAGCGTCGAGTACCAGTGCCCAATATGAATGCTTGGGGattaaaacgataa
Protein Sequence: MANCNNNNRKGGYFDQYVNFDQFLMQHNINNWSPHRGSDNRSYGGFSQDPYGTSNNGFHFQSQHNGPSISGDYRPPTDWLQSSNLTVTASEFVPQTTTSSTSTLLPTANEFVPKNSPKSTAKECSSLNKQSNTVVCDKDKNDRIAPKDENASKTDSVIQALNKTHITDDATRPLHSSGGAIKKVRNQDYRDTDSRDRHSNGNLHAKKKRQERYDDYRRRVNESNRQNSGRATKYDSNRNYRGKNETCEEDSSTNYKKRNQRYNNNNKGSNNNINGNSNHGSGYFENSSKSKLDEQSESKDRNKKNDKYEPKDRKRYDAKPNQRNGKAKGIKIDSVNCSQREKLSREIDGGRLECLVCYDIIKPYNSVWSCPNCYHILHLNCIIKWAESSKSEEGWRCCACQNISKTLPREYYCFCGKEKNPQYNRNDMAHSCGDVCGRSENCPHPCTNLCHPGPCPLCQVMVTRQCCCGKTSKMYQCNQKVEFKCDQQCEKELNCSVHKCEKSCHSGECEDCAEEIEQTCHCKREKRTVPCTKENKESLTYSCGQVCDKQLKCNNHNCKELCHEGECKDCELLPELVKHCPCGKMQIEKDKRTSCMDPIPLCTSNCKKRLTCGQPSNPHACNSKCHFGPCPPCNKQTAVKCRCGNMDQMIKCSQLSTRADDARCKKKCTKKRNCGKHKCNVECCIDIDHECPLKCTYTLSCGKHKCESTCHKGRCLPCYRSSFDELYCECGHNVIYPPVPCGTKRPPCDRPCSRQHACDHEVTHNCHSAQNCPPCMAFTRKYCHGRHEQRNIIPCSQKDFSCGLPCNKQLKCGRHKCIKTCHAGLCETETDVCKQNCTKPRLMCPHNCNAPCHLDSPCPDMACRENIEVSCQCGLRKQTRTCHDFSSDYRKIATATLASSMEQMQNGGTIELSDVLGPIKTTNNKTLECNEDCRVAERNRRLAIGLQIRNPDLPSRQPKYTEFSRGWAKKDPKLVSMIHDKLTELVKLAKDSKQKSRSYSFPTMNREKRQLVHEMCEMFGVESKAYDAEPNRNVVASANRATSWLPSMSILEVVERENGQRRVPVPNMNAWGLKR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -