Cnas013233.1
Basic Information
- Insect
- Contarinia nasturtii
- Gene Symbol
- pnr
- Assembly
- GCA_009176525.2
- Location
- NW:1165783-1239443[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1 2.6e+03 -2.2 0.2 22 28 171 177 169 178 0.78 2 2 8.8e-17 2e-13 49.3 3.8 1 35 666 699 666 700 0.98
Sequence Information
- Coding Sequence
- ATGGATGCAACGATGACATCATTACCAGTGGTACCGTCAAAATTTTACCAAGTGTGTCGACTGTGTTTGACCGTCGTCAGTGACACCAATGACTTGATGAACTTATCAGTGTTCGGTCGTCACAATGCAGGTTACATTGGAAGTACTGCAACCAGCGCACAAACCAACAATGCCAATGAGGACAGTATGATTGTCACCGCATCaaccaataacaataacagcagcagtagcagcagTGGCGTCATTGTTAAAACAGCCAACAGAAAAATTTCGTCCCCGACCAATGAACATTTAGCCAGTAATTCGGTTACCAACAATGCCAGCGATAATGAAGCAGCTGCTTGTGGTCAGAGCACCACAATTCGCGGCGGTGGTAGCAGTAGTGACGGCGGTGATGATGataacaacaatttcaaaattgatggtGACCTACACCACGCGGATATACTCGAAcgcatttacaattttctatCAATTACGGTGTCACCAAACGATGGATTACCGGCGATCGTATGTAATATGTGCCGAACACAATTGGATACATGCCAACAATTTCGTGATAAAGCACAACGTTCACAGCAAAAATTGcagaattttataaaattcgcCAACAAATTGACGGGTGATCCACAGGATGTGCTCAAGCAAACGTCATCAAGTTTGGATGAAATGTTACATGTATCATGCCGTGAAGCATCTGAGCATACCGCCGCTGCCGCCCTTACCGAACTTCGTAACAATAACAATCATCATTTGAAGAATAAATCAATTGCCAGCCCAAATGCAATAGTTACCTCAATACTCAGCAAAAATCATATAGATCATTTGGAAGCGAATTCAGTATCTGTGATTCCAATCGATGCGGCCAATAAACATAACAACGGAACTAATATTCAACACAGCGGTGCCGGCGGAGTACCAAATGCACAacaatcgaatcgaatttcGGTGAAAAAATCACTTGGTCAAATAAATGCGGCAGTTACcctaaatcaaatgaatcacatGCACGCAACAATGCCACCCGAAGCGGCTACTGCACTTGAAATGCATCGTTTAACACAATTACAACAACATCTTGAAACGGCTGCCGTTTTAATGGATATCAGTAAAAAGGTGATCATTTCACCGCCCAGCTCCAATCCACAGTCACCCGGTTTGGGTGTTGATGGccaacaaaatgttaaaatgacCATTAAACGTTCGAGTGGCGATGAAATCGATTCATCGTCCGCAGTGAAACGCATGAAAACTAATGCCAAAGGTAATAACGTAACAACTACCGTTTaccacacaaattcaaatgcacgACCGAGTGCCAGTGTCAAAACAGAGCCAGTATACAATGCAACCGATGATTCGGAAGGAAATCGCTATGACAGTGATAACGATAGCAATGACAGCGATCCGGGACGACTTGAAATGGACATCAGCTCATCACATGATAACGATGATACAAACAACGACGCAGTTGGCCGATGCTCATCGTCACCggttaaattgatttataaGCATAACAGAAGCTTCAATAATAATACACCGTCCGGTCGAGACACACCAGAAAGCAACAAATCAGACGATCATCGCACAGATCCAGCTACAACACAACTATGGCAAGCTTTAGCTAGATCAACCGGCAATGGAGCTGGAAATGAAGCAACACAGCTTTTGCGACAAATGATTACTTGCCGATCACTTGGTCTGCCAATTCCATCTGCTTTGAATATATCCCGCAACATCAACGATCAACCAATCTCATTAGTTAAGCATGAGGGatcaaaatcatcatcgtcaGGCCGTCGAAAACAGTCGTGCCCGAGCAAAGCTTCAACAgacaaatcaaatgacaacGATGTACTTGCAAACATTAAAAAACCGATGAACGAATCAAAAATGGATCTATCAAATGCCAAAGTTTGGGCCAACAACGTTGAGACAAAACCAAAATCAGCACCGATTGAAAACAACCAAAGTCCAAATCAGAAAGATATGTCTTGTACAAATTGTGGAACATTGACGACAACCATTTGGCGGCGCAATGTTCGTGGTGAAATGGTTTGCAATGCATGCGGTCTTTATTTCAAGTTGCACGGCGTTAATCGGCCGCATTCAATGCGACGTGACACCATTCACACACGCCGAAGACGACCGAAGGGCGATAAGTCGGGACGCAGACGGTCTAAAAATCAAGATACTGGAAATACATCTGGTGCTGATCAATCGCCGAATGGTTTCAACGATCAACCGGATCAACATGATTTGCAAGCACTTCAAAATCATAATTTGCTAATTGCGTTGGGCGCTGCTCGCCAAGCTCCTGGTGCTCAACACTTTGCTATGCCTCCATTCTTTGATCCACATTTCTTGCGAACACAACAATTTTCTGATGCTGGCACTGATGAACGAATTGGCGATGAAAACAGCAATAATTCATCAATAAATCGTCGCCGGGACGACGAGGATGacatcgatgatgatgaagatgaaaatgatgcaGATTCAACAAATCTACCTCTGAATTTGGTAGCCACACAGTTCGCTGAATGA
- Protein Sequence
- MDATMTSLPVVPSKFYQVCRLCLTVVSDTNDLMNLSVFGRHNAGYIGSTATSAQTNNANEDSMIVTASTNNNNSSSSSSGVIVKTANRKISSPTNEHLASNSVTNNASDNEAAACGQSTTIRGGGSSSDGGDDDNNNFKIDGDLHHADILERIYNFLSITVSPNDGLPAIVCNMCRTQLDTCQQFRDKAQRSQQKLQNFIKFANKLTGDPQDVLKQTSSSLDEMLHVSCREASEHTAAAALTELRNNNNHHLKNKSIASPNAIVTSILSKNHIDHLEANSVSVIPIDAANKHNNGTNIQHSGAGGVPNAQQSNRISVKKSLGQINAAVTLNQMNHMHATMPPEAATALEMHRLTQLQQHLETAAVLMDISKKVIISPPSSNPQSPGLGVDGQQNVKMTIKRSSGDEIDSSSAVKRMKTNAKGNNVTTTVYHTNSNARPSASVKTEPVYNATDDSEGNRYDSDNDSNDSDPGRLEMDISSSHDNDDTNNDAVGRCSSSPVKLIYKHNRSFNNNTPSGRDTPESNKSDDHRTDPATTQLWQALARSTGNGAGNEATQLLRQMITCRSLGLPIPSALNISRNINDQPISLVKHEGSKSSSSGRRKQSCPSKASTDKSNDNDVLANIKKPMNESKMDLSNAKVWANNVETKPKSAPIENNQSPNQKDMSCTNCGTLTTTIWRRNVRGEMVCNACGLYFKLHGVNRPHSMRRDTIHTRRRRPKGDKSGRRRSKNQDTGNTSGADQSPNGFNDQPDQHDLQALQNHNLLIALGAARQAPGAQHFAMPPFFDPHFLRTQQFSDAGTDERIGDENSNNSSINRRRDDEDDIDDDEDENDADSTNLPLNLVATQFAE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -