Basic Information

Insect: Contarinia nasturtii
Gene Symbol: ztf-16
Assembly: GCA_009176525.2
Location: NW:8853481-8880952[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 6 0.00016 0.0058 16.7 1.0 1 23 215 237 215 237 0.98

2 6 0.00046 0.017 15.2 4.2 1 23 243 265 243 265 0.98

3 6 0.0019 0.071 13.3 0.9 1 23 271 294 271 294 0.94

4 6 2.2 83 3.6 0.9 2 22 303 323 302 325 0.87

5 6 0.35 13 6.1 0.1 2 19 711 728 710 730 0.92

6 6 0.025 0.94 9.7 0.3 2 22 739 759 738 762 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	6	0.00016	0.0058	16.7	1.0	1	23	215	237	215	237	0.98
2	6	0.00046	0.017	15.2	4.2	1	23	243	265	243	265	0.98
3	6	0.0019	0.071	13.3	0.9	1	23	271	294	271	294	0.94
4	6	2.2	83	3.6	0.9	2	22	303	323	302	325	0.87
5	6	0.35	13	6.1	0.1	2	19	711	728	710	730	0.92
6	6	0.025	0.94	9.7	0.3	2	22	739	759	738	762	0.89

Sequence Information

Coding Sequence: ATGTCGAGTGAACCCGACTGTACGGCATCATCTGGTGGTTCCGGATTCTTGCTGGAGTCATCATTGAGCAACATCATTAACCATCGCAAAAGTAcgattaataataaaatcaacaacaacaacaacaacaacgaagaTACCGACTGTGACCTAGAAAGCGTCCATAATAATAACTCAAATCATAACagtgatagcaacaacaacaacacaaacaacaatggtaacaatacaaataatattaatCATGCAGCAGCTGCAACGACAACAGCATCGAGTAGCCTGTTGGGCGATAGTGCAACAAATTTGGATGGGAAATTTAATTTTTTTGGTATAGATACATTAAAATGCGATCGATGTGATAAATTTGAAACGATATCGCATGCCCTGTTGTTGGTACATGTGGCTCAGTGTCGGGGCGATTCGAATAGTTCAAACAGCGGATCTAGTCGACAGCAATATCCAATGGATGTAGTAAATGCAAGCACCGATAGCGGCATAGCTGAAGATGCAACACAGTCGACCATGGATTCAACATCGGTGACTGCCTCATCGTCCACCATTAACATGAATAGTGACAGTAGCAGTTTGCAACTGAAGCAAAATGCCGATGCAAATAATGGTAATGTGGCACAGAGGAAGCTATTTGAATGTGATGTGTGCaatatgaaattttccaaTGGAGCCAATATGCGAAGGCATAAAATGCGACACACTGGAGTCAAGCCATACGAGTGTCGAGTGTGTCAAAAGCGATTCTTTCGAAAAGATCATCTTGCTGAACATTTTACAACGCACACAAAAACACTTCCGTACCATTGTCCAATTTGTAATCGAGGATTTCAACGGCAAATCGCAATGCGAGCCCATTTCCAAAATGAACATGTCGGCCAAAATGATCTCGTCAAAACCTGTCCTTTGTGCAATTATCGAGCGGGCACCATGAAATCGCTACGAATTCACTTTTTCAATCGGCATGGCATCGATTTAGATAATCCAGGCCCAAATGCACCGTCATCGCTTCTACTCGCATTGGATGCATCAAACGCTAGCAGTTATCTGCCATCTATAGCATTGGCAGCGGCCGCTGCCGCTGCTGCCGCCAGTTCCGCAAATAATTCAGCACTCTCAATGGCTGCCAATAACAATAGCAACAGCGTTACAGCCTACAGTGACAGTGGCGATTCTATGCAGGACTCATTACGATCAGCTGAAAACGGAACACCGCCGATGCACTTTTTGACTCCGCATGTTGAAATTTCCATGGCAGATAATGACAGTTTCAAATCGGAACCAATTCCACCGAGTATTAGTTCAGCGCTCGAAATTCAAGCGTGCCCATCAATGAATAGACCATTAAATGGTGGCTCACCATCACCACATTCGGCAGATTCCAATGCACCAACTAGCTCTCAATCATTAATAAGTAGCGCTTTACAAAGTTCGCGTCAAAGTTTACTTCATGATGGACAAATAACACCGTCAATCAGTCTTATACCAATTAAACAGGAACCCGGTTGTGATGAGTATGATAGTTTGTCAAAATCTTCACATCAACAAAGTGGCGATCAACAATCATCGTCATCAATGCAAAATTTAAACTCAATCACAACGAATTCGGTCGAATCCAGTGCGGCGTCTTCATCGAGTCTGACCTCCTTAATCAAAGTATCTCCTTTGAAATCACTATTACGTGAAGATTTAAAAAGGCGAATATCGGCTCGAGCAAGTAGTCGTGCTTCACGAAACAATAGCAATGCCAATGGAAATAATAGCGAAAGCATTAACAATGGATCCAACGGCAGCAATGCAAATAGTTCAACCACATCCAGTCCAGCTGCAACTCAAAATTCGTCGTCGTCAATATCATTCAGTAAAATTGGAAGCAGTGCATCGTCCATTGCGAATACGATGAATGCGATCAGCCAGCATTTATTGTCCAATTCATCGATTACTGTTACAACTGAGTCGACAACAACGTCATCGGGCTCATACAATGGAACGACCACATCACGTAGTCCATTGGGTGCTGTggcaacaacatcaaatggTGCAATCACATCAACGGGCACATCAGAAACGGAACTTTTGCTAGCGGCGGTATCAAGTGGACATCGAGGCAAACGAATGCTTCAATGCTTATTCTGTGGCATTGAATTTCCCGATCAAACTTTATATTTCTTGCATAAAGGTTGTCATAGCGAGAGCAACCCATGGAAGTGCAATATATGCGGCGAACAATTGAATAATGTTTATGAATTCAATTCGCATTTGTTAAGTAAGAGTCATCAATAG
Protein Sequence: MSSEPDCTASSGGSGFLLESSLSNIINHRKSTINNKINNNNNNNEDTDCDLESVHNNNSNHNSDSNNNNTNNNGNNTNNINHAAAATTTASSSLLGDSATNLDGKFNFFGIDTLKCDRCDKFETISHALLLVHVAQCRGDSNSSNSGSSRQQYPMDVVNASTDSGIAEDATQSTMDSTSVTASSSTINMNSDSSSLQLKQNADANNGNVAQRKLFECDVCNMKFSNGANMRRHKMRHTGVKPYECRVCQKRFFRKDHLAEHFTTHTKTLPYHCPICNRGFQRQIAMRAHFQNEHVGQNDLVKTCPLCNYRAGTMKSLRIHFFNRHGIDLDNPGPNAPSSLLLALDASNASSYLPSIALAAAAAAAAASSANNSALSMAANNNSNSVTAYSDSGDSMQDSLRSAENGTPPMHFLTPHVEISMADNDSFKSEPIPPSISSALEIQACPSMNRPLNGGSPSPHSADSNAPTSSQSLISSALQSSRQSLLHDGQITPSISLIPIKQEPGCDEYDSLSKSSHQQSGDQQSSSSMQNLNSITTNSVESSAASSSSLTSLIKVSPLKSLLREDLKRRISARASSRASRNNSNANGNNSESINNGSNGSNANSSTTSSPAATQNSSSSISFSKIGSSASSIANTMNAISQHLLSNSSITVTTESTTTSSGSYNGTTTSRSPLGAVATTSNGAITSTGTSETELLLAAVSSGHRGKRMLQCLFCGIEFPDQTLYFLHKGCHSESNPWKCNICGEQLNNVYEFNSHLLSKSHQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00133835; iTF_01288622; iTF_01351227;
90% Identity: iTF_01351227;
80% Identity: -