Basic Information

Insect: Contarinia nasturtii
Gene Symbol: ZBTB8B
Assembly: GCA_009176525.2
Location: NW:12911-15378[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.75 28 5.1 1.9 1 23 25 48 25 48 0.95

2 7 0.76 28 5.1 2.3 5 23 184 203 183 203 0.80

3 7 7.6e-05 0.0028 17.7 2.2 1 23 209 231 209 231 0.99

4 7 5.7e-05 0.0021 18.0 1.8 1 23 237 260 237 260 0.93

5 7 3.5e-05 0.0013 18.7 2.7 1 23 266 289 266 289 0.91

6 7 3.6e-05 0.0013 18.7 2.3 1 23 295 317 295 317 0.97

7 7 0.00018 0.0067 16.5 3.7 1 23 322 345 322 345 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.75	28	5.1	1.9	1	23	25	48	25	48	0.95
2	7	0.76	28	5.1	2.3	5	23	184	203	183	203	0.80
3	7	7.6e-05	0.0028	17.7	2.2	1	23	209	231	209	231	0.99
4	7	5.7e-05	0.0021	18.0	1.8	1	23	237	260	237	260	0.93
5	7	3.5e-05	0.0013	18.7	2.7	1	23	266	289	266	289	0.91
6	7	3.6e-05	0.0013	18.7	2.3	1	23	295	317	295	317	0.97
7	7	0.00018	0.0067	16.5	3.7	1	23	322	345	322	345	0.97

Sequence Information

Coding Sequence: atgtgtataacaataaatgaaatcgatgaagCGTGcggatttttgttgttaaatgAATTCAGTGtctttatttattgttgtaaaaaatgtttgatcaATTTTGAGTGTGGATCAGACTTGGAGGCGCATATTTTATCCGAGCATCCCATCGGCCAAAAgcatgttgaaaatatttttgtaaacgATGGTCTTCTTGAATCATTGTCGATGgttataattaaaaatgaaccAATTACTGAAGAAGATGAATTCGATTTGTGCGTACCAACAAGTGATGAGATGGTGCCAgtgcaaaaagaaatcaatacTTCTCAATCAACGAAAGAAAGCGACAGCACCACTGATGCGTCACTCGAAATAAAAACTACCGACGAAAAACCATCGAAACCAAAAGCATACAGCAAACGAAGcaccaaaaaaacaaccaaatccGAGGTGTTTTATTGTGACATGTGTCCCGCAAATAAAGTGTCATTTAGTTGCATAGAAAATGTTCGTCAACATATGAAGCTTCACATAAAAAAGAAGCAATTCGCTACATTACGCAAGGAATGTCCAATTTGTAAAAAGACCCCGTTCAACTATGAGAAACACATGCAAGTGAATCATACCGATTCACGACCATATAAATGCGACTTTTGCGATGCGGTATTCAAAAACAACTGCAACCGCATTATACATATTAGATCACACACAGGCGAGAAACCATTTCTCTGTCCGACGTGTGGCAAATCGTTCACATCGCAAGATAAACGCAACAAACACAACATGAGAATGCACACGGAAAAATTGCCACATCAATGTCACAGCTGTGATAGGTCTTTCATCAGCCCATCGCAACTAAAAGAGCATACATACGCATTACATTCAGATGCTCGACCGTATACTTGCGATGTTTGCGGTAATAGCTATTCGAACAGGACATATTTAAGAAGACATAAATATTCGCACGGCAAGAAAACGCATCCATGCAAATACTGCGACAAGAAATTCAAAACCACCGAAACCAGAAGATGGCATGAAAGAACGGTTCACAAAGCGCTGTAA
Protein Sequence: MCITINEIDEACGFLLLNEFSVFIYCCKKCLINFECGSDLEAHILSEHPIGQKHVENIFVNDGLLESLSMVIIKNEPITEEDEFDLCVPTSDEMVPVQKEINTSQSTKESDSTTDASLEIKTTDEKPSKPKAYSKRSTKKTTKSEVFYCDMCPANKVSFSCIENVRQHMKLHIKKKQFATLRKECPICKKTPFNYEKHMQVNHTDSRPYKCDFCDAVFKNNCNRIIHIRSHTGEKPFLCPTCGKSFTSQDKRNKHNMRMHTEKLPHQCHSCDRSFISPSQLKEHTYALHSDARPYTCDVCGNSYSNRTYLRRHKYSHGKKTHPCKYCDKKFKTTETRRWHERTVHKAL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -