Basic Information

Insect: Contarinia nasturtii
Gene Symbol: MOT3_2
Assembly: GCA_009176525.2
Location: NW:1252401-1255807[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.0024 0.088 13.0 1.1 3 23 298 318 296 319 0.92

2 14 0.35 13 6.1 0.4 1 23 325 347 325 347 0.96

3 14 0.0023 0.086 13.0 1.4 1 23 358 381 358 381 0.95

4 14 9.6e-05 0.0036 17.3 3.0 1 23 392 415 392 415 0.97

5 14 0.9 34 4.8 0.5 1 23 423 446 423 446 0.94

6 14 0.61 23 5.4 0.3 3 21 475 493 475 494 0.94

7 14 1.4 53 4.2 1.5 1 23 503 525 503 525 0.83

8 14 0.0084 0.31 11.2 1.5 1 23 532 554 532 554 0.94

9 14 0.0013 0.048 13.8 1.5 1 23 563 585 563 585 0.96

10 14 0.77 29 5.0 1.7 2 23 591 613 590 613 0.94

11 14 0.0004 0.015 15.4 0.1 2 23 619 640 618 640 0.97

12 14 0.0027 0.1 12.8 3.7 1 23 649 670 649 670 0.98

13 14 0.00047 0.017 15.2 2.1 1 23 676 699 676 699 0.96

14 14 0.00021 0.008 16.2 1.8 1 20 705 724 705 726 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.0024	0.088	13.0	1.1	3	23	298	318	296	319	0.92
2	14	0.35	13	6.1	0.4	1	23	325	347	325	347	0.96
3	14	0.0023	0.086	13.0	1.4	1	23	358	381	358	381	0.95
4	14	9.6e-05	0.0036	17.3	3.0	1	23	392	415	392	415	0.97
5	14	0.9	34	4.8	0.5	1	23	423	446	423	446	0.94
6	14	0.61	23	5.4	0.3	3	21	475	493	475	494	0.94
7	14	1.4	53	4.2	1.5	1	23	503	525	503	525	0.83
8	14	0.0084	0.31	11.2	1.5	1	23	532	554	532	554	0.94
9	14	0.0013	0.048	13.8	1.5	1	23	563	585	563	585	0.96
10	14	0.77	29	5.0	1.7	2	23	591	613	590	613	0.94
11	14	0.0004	0.015	15.4	0.1	2	23	619	640	618	640	0.97
12	14	0.0027	0.1	12.8	3.7	1	23	649	670	649	670	0.98
13	14	0.00047	0.017	15.2	2.1	1	23	676	699	676	699	0.96
14	14	0.00021	0.008	16.2	1.8	1	20	705	724	705	726	0.93

Sequence Information

Coding Sequence: ATGCCACGGTATTGTTGTATACTTACCTGTAAAAACTTTCGTGGTTGTCCATCTGAAAGCAGTGTTAGTTTCTTTCGgCCGCCACAAGATGTACAGATTCGTGAAAAGTGGATACGATCAATTAGAAAATATCAAGGAATTAGCAATCAATTCAAGATCTGTCAGCTTCACTTTGATATGGACTGTTTTTTCAACAGAGTCAGGGAAACGAGTCAGCTTCGATTAAGGCCAAATGCAATTCCAACAATATTCACGACAAATCCATTCGACCAAAAGAGACATGCAGTggagaatgaaaaacaagtTGTCAATGTCAATGCTgaaccaaaaattcaatacacatATTCAAAGAAAACCAAAGTGATTGTGTTAAATGgaacgaaaaatgtgattcCAAATATGTTTGAGACGAGTTCATACAACCTTCCAATTAAGACAGAGCCCATGTCGGATGAGGAAAAAGAAGAGCCGCCCAGAGTCGAGTTAGATACCCCGTGCAATTATATCAAACAAGAGCCTGTCGATGGACAAGAAAAATCATATGACCCATTAaaAAGTGGTCAGACAATAGTGAACACTGATGTACAAGTGACGAAATCTCAAGTTTCTAGCCAAGTGCCCAGTTCATCAAAACAGTGCTATCGATGTATTGGACAAGACGTACAATTGCAGAGGTACGcaacgaaaatcaaatcattgaaagcagaatgtaaagaaaaaacaaaaacaataagaaAACTGAGACATAGTCTTtcacaattaaaaaataaagtcaGACCATTAGAATTGATTTACGCGAAGAACCTTAAGGAATATTGTGAAGTTTGTCAGCAATCATATTATCCACACGTTGAAGATCACATCTGCGAAAAAGGcatcaatgaaatttgttgtgaTTATTGTGGAAAGTCATTCAAGTCGATCGTTTTGATTTTGGATCATCTAATTATTCATCACCAcgaaaagacattttttgaatgcgATAAATGCCCAAGCATATTTTCAATGGCTTTACtattggaatttcatcagAAAAAACATTTGGACTGTGAGCAAGAATCGGGGCAAGAATTCAGTTGTGAAATCTGTGATGGAATTTTCTatacaaaatatcaaattcgaAATCATATGATCGAATGTCATTCGGGAGAAGCAAAAAACCAATTGGTCCCCCATCAGTGCGGCACATGTGGTcgatatttcaaaaatgaaggACATTTGAAATTACATGCACGACGTGCGCATGAAAAAATGGAAGCACTAAAATTTGAATGCTATATGtgtcaattaaaattaaaatcattgtatgaTACTCGTCTACACATCGAATTGGACCATCAGCGAAACGAAAATTGTCAAGTGTGTACCAATGATTTTACGACGAAAGAAATTAATGAACATTTATGCAACGGATTGAGTGGATGCGCTTATTGTCATCAACCGGTCAAGACGACGAAAGCTTTGTTACAACATTTGGAAAAAGACTGCAAAGGCGAAAAGTTACTGTACAAATGTGATATATGCTTAAAATTCTTTGGAATGGAGTTACTAAGAGACGTACACATGAAACATCATAGTACGATAGAAAAGAATTTTCTGTGTGATCTGTGTCCAAGTCGATTTTCGAATAGTACAGCATTATCTAAACATAAATTCCGACATACACAAAAAGATGGTCCTGGTTTATATTTATGCGATCAATGCGGCAAAGAATTTAAATGTGCGCGTAATTTAAGTATACACCAGCAAGTACACGAAGAGAAAAACTTGAAATGTCTCAATTGTGACTTCAGCACCAATAAAAAGGAACGACTAATTGAACATAAGAcgagaaatcatcaaaactACAAAGTCGTTTGTAATATCTGTAAGGCCGTTCTCTCTTCCAAAAGGGGACTTTCAAGTCATATGAgAGTTCATAGACGCACCGACGAAGATCGAAAGTATACTTGTGcgatttgcaaaaaaaagtttcacaaAAAGGCCTGGAAAAGACATTTGCTGTcacattcgaatgaaaaacCATTTGTTTGTGAGTTTTGTGGACAAGCATATAAGTACAATGGCGATTTGATGCAACACAAACGCCACAGGCATGTTGGAGATAACTTATATGCCTGTGAAAATTGTCCAAAACGATTCCGTTATAAGTCACAGTTTGTTCGTCATAAACATGTATGTTCCAAAAATGAGAACGGTTGA
Protein Sequence: MPRYCCILTCKNFRGCPSESSVSFFRPPQDVQIREKWIRSIRKYQGISNQFKICQLHFDMDCFFNRVRETSQLRLRPNAIPTIFTTNPFDQKRHAVENEKQVVNVNAEPKIQYTYSKKTKVIVLNGTKNVIPNMFETSSYNLPIKTEPMSDEEKEEPPRVELDTPCNYIKQEPVDGQEKSYDPLKSGQTIVNTDVQVTKSQVSSQVPSSSKQCYRCIGQDVQLQRYATKIKSLKAECKEKTKTIRKLRHSLSQLKNKVRPLELIYAKNLKEYCEVCQQSYYPHVEDHICEKGINEICCDYCGKSFKSIVLILDHLIIHHHEKTFFECDKCPSIFSMALLLEFHQKKHLDCEQESGQEFSCEICDGIFYTKYQIRNHMIECHSGEAKNQLVPHQCGTCGRYFKNEGHLKLHARRAHEKMEALKFECYMCQLKLKSLYDTRLHIELDHQRNENCQVCTNDFTTKEINEHLCNGLSGCAYCHQPVKTTKALLQHLEKDCKGEKLLYKCDICLKFFGMELLRDVHMKHHSTIEKNFLCDLCPSRFSNSTALSKHKFRHTQKDGPGLYLCDQCGKEFKCARNLSIHQQVHEEKNLKCLNCDFSTNKKERLIEHKTRNHQNYKVVCNICKAVLSSKRGLSSHMRVHRRTDEDRKYTCAICKKKFHKKAWKRHLLSHSNEKPFVCEFCGQAYKYNGDLMQHKRHRHVGDNLYACENCPKRFRYKSQFVRHKHVCSKNENG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00367259;
90% Identity: iTF_00367259;
80% Identity: iTF_00367259;