Basic Information

Insect: Contarinia nasturtii
Gene Symbol: zfh1
Assembly: GCA_009176525.2
Location: NW:4063904-4099244[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.091 3.4 8.0 0.5 1 20 86 105 86 110 0.92

2 8 2.9e-05 0.0011 19.0 1.2 2 23 119 140 118 140 0.97

3 8 8.8e-07 3.3e-05 23.8 5.8 1 23 149 171 149 171 0.99

4 8 0.0013 0.049 13.8 1.3 3 21 179 197 177 198 0.94

5 8 0.0058 0.22 11.7 0.5 2 19 407 424 406 427 0.92

6 8 1.3e-05 0.00047 20.1 0.7 1 23 734 756 734 756 0.94

7 8 0.00012 0.0046 17.0 9.4 1 23 762 784 762 784 0.98

8 8 0.0032 0.12 12.6 4.6 1 21 790 810 790 811 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.091	3.4	8.0	0.5	1	20	86	105	86	110	0.92
2	8	2.9e-05	0.0011	19.0	1.2	2	23	119	140	118	140	0.97
3	8	8.8e-07	3.3e-05	23.8	5.8	1	23	149	171	149	171	0.99
4	8	0.0013	0.049	13.8	1.3	3	21	179	197	177	198	0.94
5	8	0.0058	0.22	11.7	0.5	2	19	407	424	406	427	0.92
6	8	1.3e-05	0.00047	20.1	0.7	1	23	734	756	734	756	0.94
7	8	0.00012	0.0046	17.0	9.4	1	23	762	784	762	784	0.98
8	8	0.0032	0.12	12.6	4.6	1	21	790	810	790	811	0.96

Sequence Information

Coding Sequence: ATGGCAGCAACTATGTTATGCACGAGCCAATCATTATTAGATTTTGACCAAAAAATTCCATCGTTAGTGTCAGGTTTATCTGGCGATAACAAGAATATGccagttgatttttttctgaagcatcaacaacagcagcagccaCAATACACACCGACATCAACACATTTATCGACTATGCTCCTTACTTACAAAGAAGAAatcaatgatgaaaaaagaggTAGTTCCATTAGTCCGAGCATATCGGTGGATGGATCATACGCATGCTCACAGTGCTCCGCCTCGTTCTTAAATCGTGATCAACTAGAAAAGCACGAGCATGAAGCCATGCACTCACCTAATTCGCAACAATCGGTGAGCTGTAAAAAGTGTCAAAAATCATTCGCCAATGTGTATCGTCTACAACGTCACATGATTAGTCACGATGAATCGGAATTGCTACGCAAATTCAAGTGCAACGATTGTGATAAGGCGTTCAAATTTAAGCATCATTTGAAAGAACATATTCGCATACATTCGGGTGAAAAACCATTTGGTTGCCGTAATTGTGGTAAACGATTTTCACATTCCGGCTCCTATTCAAGTCACATGACATCAAAGAAATGCATTAATTCGGGACAAAAAGGAAATCGTTcggtgaaaatggaaaaaactgGCACACAAAAGCGTTCTGGATTTTTATCACAACAATTGCCGAATGTAAACAATGTTGGTCTTGGTGTCGGATTGaatttgaacgaaaacaataatttGCCAACAAGTCCAAATCATAATGCATTCTTATCAATGATGCCGAAATACCATGGTTACGATGTAAATGCATTGCTAGCATTCGGTAATTTGCCAAATCCATTCCTTATGATGGATCCACGTCATCACATTCACAGTATACAAAGTTTATTGGGATTGACTGGTGCACCATCCAATGTGATGGAAGGTTTTCTCAATAATTCGCATAATATTAAAACGCCAAGCCTCCATTCGGATCCGGAAGATATGATCGAAGAGGTGACTGATGATATAAACGATGAATCGGGAAAATTAGTTATGGACATTGATGGCgatgaaagtgaaaataaaatgaaaattgaagataTGTCACCATCGCCAGCAATCAGTGTTAGTAGTCCAATATCGTCaccgaattcaattcaagatCGTTgtgaattgatgaaaaaagaagacagTCGCAGCGAAAATGGTTATGATAATAACGATTTGACATGCGGACGATGCAGTAAGACATTCAATCATCGCACTGAATTGGCACAACACGAGACCATTCTATGCGGAATGATACGAAAACAAGAAGAGGCCTATGCAGCAGCTCAAGCTCATGCAGCTGCCGCTGAAACGATGACAATGAATGCAAGCTTTGCAGGAATGGGACTaccaaatcaacaacaatcgGGCAGTGAAGATGAACGAAAAGTACGCGTTAGAACTGCCATTTCAGAAGAACAACAAGCCATTTTAAAAGAATACTatgcaaaaaatccaaaaccaGGCCGAGACGAATTCCGAACAATTGCACAAATTTTGTCATTGGATTCGCGTGTAGTTCAGGTCTGGTTTCAAAATAATCGTTCACGCGAACGTAAACTCAATAACATGGGATACTCAAAGCAACATCAATTGTTTGTAAACGGCCAATTGTCGGCCGCTGCTGCTGCAGCCGCTGCCGCTGTTGTTGCAGCTGACAACAAATCACAATCAAATAATACAAAGATTCCATTGCCAATTCCATTGCAACAGTCGATACTCAATAGCCAATTATCGCCAAAATTCAATCACAGCCCCGTTGAAAATATGGACGATCAACCTCTGGATTTATCAGTAAAGAAGGAAGGTTCAATTTCAACGCCATCAAATTCACCACGATATGGAACGGCACCGTTGCCATCTGAAGAAGTTATAAATCTAAGTCGAAAATCATTACCACATTATCCTTATGTGCCACCATTGGGTTTCGTACCAATGGAACGTTTTCTAAATATAGCACCTGAAATGGCTCGAAATAGTCTTGTGTCGGACAGTGTGAGCCCAGTAtcagaaaaacaacaacgtatATGGAAGGAAGAGCTTCAGTATGTCAAAGATACATTCAATGGAAATCTTTCACCAAAACAGCCAATTACACAATCTCAAGCACCGGCTAAACGATCCTATGTTAAACAACAAGTTCCTGAAGGCGAAGgtcaatttatttgtgatgAATGTGACAAAGCATTCAACAAGCAGAGCTCATTGGCGCGACATAAATACGAACATTCTGGTCAGCGTCCGTATAAATGTCAGGATTGTACAAAAGcattcaaacacaaacatcATTTGACCGAGCATAAGCGACTGCATACAGGTGAAAAACCGTTCCAAtgcacaaaatgtttgaaaaaattctcGCATTCAGGATCGTACAGTCAGCATATGAATCATCGCTATTCGTACTGTAAACCATATAGAGAAGCTTAA
Protein Sequence: MAATMLCTSQSLLDFDQKIPSLVSGLSGDNKNMPVDFFLKHQQQQQPQYTPTSTHLSTMLLTYKEEINDEKRGSSISPSISVDGSYACSQCSASFLNRDQLEKHEHEAMHSPNSQQSVSCKKCQKSFANVYRLQRHMISHDESELLRKFKCNDCDKAFKFKHHLKEHIRIHSGEKPFGCRNCGKRFSHSGSYSSHMTSKKCINSGQKGNRSVKMEKTGTQKRSGFLSQQLPNVNNVGLGVGLNLNENNNLPTSPNHNAFLSMMPKYHGYDVNALLAFGNLPNPFLMMDPRHHIHSIQSLLGLTGAPSNVMEGFLNNSHNIKTPSLHSDPEDMIEEVTDDINDESGKLVMDIDGDESENKMKIEDMSPSPAISVSSPISSPNSIQDRCELMKKEDSRSENGYDNNDLTCGRCSKTFNHRTELAQHETILCGMIRKQEEAYAAAQAHAAAAETMTMNASFAGMGLPNQQQSGSEDERKVRVRTAISEEQQAILKEYYAKNPKPGRDEFRTIAQILSLDSRVVQVWFQNNRSRERKLNNMGYSKQHQLFVNGQLSAAAAAAAAAVVAADNKSQSNNTKIPLPIPLQQSILNSQLSPKFNHSPVENMDDQPLDLSVKKEGSISTPSNSPRYGTAPLPSEEVINLSRKSLPHYPYVPPLGFVPMERFLNIAPEMARNSLVSDSVSPVSEKQQRIWKEELQYVKDTFNGNLSPKQPITQSQAPAKRSYVKQQVPEGEGQFICDECDKAFNKQSSLARHKYEHSGQRPYKCQDCTKAFKHKHHLTEHKRLHTGEKPFQCTKCLKKFSHSGSYSQHMNHRYSYCKPYREA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00367125; iTF_00133141; iTF_00133731; iTF_01288021; iTF_01288518; iTF_01351063; iTF_01350583;
90% Identity: iTF_00367125;
80% Identity: iTF_00367125;