Cnas004417.1
Basic Information
- Insect
- Contarinia nasturtii
- Gene Symbol
- Iswi
- Assembly
- GCA_009176525.2
- Location
- NW:318924-323825[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.8e-05 0.087 12.6 0.0 3 41 804 843 803 845 0.95 2 2 0.0055 5.4 6.9 0.0 3 21 906 925 904 931 0.90
Sequence Information
- Coding Sequence
- ATGTCTGACGACGAACAAAATAACGAAGCAATGGAAACCAACGAAAATTCCGACAGCAATGAGAATTCGAATGACGGTCAACCGATGGAAATAGAACAAGTTGATGCCGAATTGGACAACAAAATGGAGAAAGATCGCTCGAAACGATTCAACTTTTTGCTGAAACAAACGgaaatttttacacatttcatGACCAACACTGGCTCCAAATCACCAACGAAAGTTAAAACGGTGGGACGAcccaagaaaaacaaagaagtaCTATTGGAAGCTACTGGAGATCCTGGAGACCATCGACATCGTAAAACCGAgcaagaagaagatgaagaattaCTTGCTGAAACAAATACAGCATCGAACGTATTTCGTTTCGAAGAATCACCACCGTACATTGAAAACGGAGAAATGAGAGACTATCAAATCAGGGGTCTCAATTGGATGATTTCGTTGTATGAAAATGGAATCAACGGTATTTTGGCCGATGAAATGGGtttGGGAAAAACTTTACAAACCATCTCATTGATTGGATATTTGAAGACACTCAAAAAAGTCAATGGTCCACACATTGTCATTGTGCCGAAATCAACCCTCCAAAATTGgatgaatgaattttcgaaatggtgTCCATCGGTGAAAGCGGTTTGTTTAATCGGTGACCAAAATTCCCGTTCCGAGTTCATTCGTGATGTTTTATTATCCGGTGAATGGAATGTGTGTGTTACATCATACGAAATGTGTATTCGTGAAAAGAGTGCACTAAAGAAGCTGTCATGGCGTTACATGGTCATCGACGAAGCGCATcgtattaaaaatgaaaaatccaaattgtCGGAAATTTTGCgtgaattcaaaacaacaaatcgtcTACTCATCACCGGAACACcattacaaaataatttacatgAATTGTGGGCACTGCTCAATTTCTTGTTGCCGGATGTCTTTAACAGTGCTGATGATTTTGACGAATGGTTCAATACCAATCAGTGTTTGGGCGATGATTCATTGGTGAAGCGTTTGCATGCGGTGTTGCGTCCATTCTTATTGCGTCGCTTAAAATCGGAGGTGGCCAGTGAAttgaaaccgaaaaaagaaatgaaaattttcgttgGCCTGTCAAAGATGCAACGTGAATGGTATAcaaaaattttgatgaaagaCATTGGCATCGTCAATGGAGCCGGCAAATGCGagaaaatgcaattgcaaaaTATTCTGATGCAATTGCGAAAATGCACAAATCATCCATATTTGTTTGATGGTGCAGAGCCCGGACCACCATACACAACCGACACCCATTTGATTTACAACAGTGGCAAAATGGTTGTGCTCGATAAATTGTTGCCAAAATTACAAGAGCAACAATCACGTGTGTTGATCTTCAGTCAGATGACACGAATGTTGGATATACTTGAAGATTATTGTCATTGGCGTCAATTCCAATACTGTCGTTTGGACGGAAAAACAGCGCACGAAGATCGTGATCGTTATATCAGCGAATACAATTCGGAAGGAagtcaaaaattcatttttatgttgtcaACACGTGCTGGTGGTTTAgGTATTAATCTTGCCACCGCTGACGTTGTCATCATCTTCGATTCCGATTGGAATCCTCAGATGGATTTACAGGCCATGGACCGTGCCCATCGTATTGgtcaaaagaaacaagtgCGTGTTTTCCGTTTTGTCACCGACAATACGGTTGAAGAAAAGATTGTTGAGCGTGCCGAAATCAAGTTGCGCTTGGACAAATTGGTCATTCAACAGGGTAAATTGGTTGACAGTAAAACAAGCCAATTGAACAAAGATGAAATGTTGAGTATGATTCAACATGGTGCAAATCATGTGTTTGCATCAAAAGATTCCGACATTACCGACGAAGATATCGACGAGATTTTGGgtaaaagtgaagaaaaaactgccgaacaaaagaaaaaattggacGAATTGGGCGAAAGTTCATTGCGCACATTTACACTTGATACAgccgaaaaaaatcataacattTATCAATTCGAAGGTGAAGATTTCCGTGAAAAGGCCAAAATTAATATTGGTAATTGGATTGAACCGCCAAAGCGTGAACGTAAAGCAAACTATGCAGTTGATGCTTATTTCCGTGATGCATTGCGTACATCGGAACCAAAAGCACCGAAAGCACCACGTCCACCCAAACAACCAATCGTTCaagattttcaattctttcCACCACGTTTGTTTGAATTACTCGATCAGGAAATATACTATTTCCGTAAAACGGTCAATTATAAAGTACCACGGAATCCAGATTTGGGTGCCGATGCCGTAAAAGTACAACGTGACGAACAGCGCAAAATTGACGAAGCCGAACAATTGACCGATGATGAAATCGCCGAAAAGGAATCATTAATGACACAAGGTTTTACCAATTGGACAAAACGAGATTTTAGCCACTTCATTCGGGCTAATGAAAAATACGGACGAGAAGATATTGACAATATTGCCAGAGACGTTGAAGGTAAAACACCGGAAGAAGTCATTGAGTACAGTCAAGTGTTTTGGGAACGTTGCCAAGAATTGAACGACATTGAACGTATcatgaaacaaattgaacgcGGTGAATCGAAAATTCATCGTCGAGCTTCGATTAAAAGAGCATTGGATATAAAGATGTCGCGATACTTGGTGCCATTCCATCAATTGAGAATTTCGTACGGTACAAACAAAGGCAAGAATTacacagaagaagaagatcgTTTCCTTGTTTGTATGCTACATCAGCTGGGATTTGACAAGGAAAATGTTTACGAAGAGCTCCAAGCAGCTATTCGGAATTCGCCACAGTTCCGTTTCGATTGGTTTTTGAAATCACGTAAAGCGGCCGAATTGCAACGTCGCTGCAATACGTTGATCATGTTGATTGAACGTGAAAATCAAGAATATGAGGAACGTGAACGtctcgaaaaaaagaagaaagcaGTCAAAGAGAATGTGACATTAACAAATGGCAGCAACGGTGCATCGCCCGCTCAAAAAGCTGCCCAGAAAAGGAGAGCCGAAAGTTTGAACGACAGCAAAACcggcaaaaagaaaaagaaataa
- Protein Sequence
- MSDDEQNNEAMETNENSDSNENSNDGQPMEIEQVDAELDNKMEKDRSKRFNFLLKQTEIFTHFMTNTGSKSPTKVKTVGRPKKNKEVLLEATGDPGDHRHRKTEQEEDEELLAETNTASNVFRFEESPPYIENGEMRDYQIRGLNWMISLYENGINGILADEMGLGKTLQTISLIGYLKTLKKVNGPHIVIVPKSTLQNWMNEFSKWCPSVKAVCLIGDQNSRSEFIRDVLLSGEWNVCVTSYEMCIREKSALKKLSWRYMVIDEAHRIKNEKSKLSEILREFKTTNRLLITGTPLQNNLHELWALLNFLLPDVFNSADDFDEWFNTNQCLGDDSLVKRLHAVLRPFLLRRLKSEVASELKPKKEMKIFVGLSKMQREWYTKILMKDIGIVNGAGKCEKMQLQNILMQLRKCTNHPYLFDGAEPGPPYTTDTHLIYNSGKMVVLDKLLPKLQEQQSRVLIFSQMTRMLDILEDYCHWRQFQYCRLDGKTAHEDRDRYISEYNSEGSQKFIFMLSTRAGGLGINLATADVVIIFDSDWNPQMDLQAMDRAHRIGQKKQVRVFRFVTDNTVEEKIVERAEIKLRLDKLVIQQGKLVDSKTSQLNKDEMLSMIQHGANHVFASKDSDITDEDIDEILGKSEEKTAEQKKKLDELGESSLRTFTLDTAEKNHNIYQFEGEDFREKAKINIGNWIEPPKRERKANYAVDAYFRDALRTSEPKAPKAPRPPKQPIVQDFQFFPPRLFELLDQEIYYFRKTVNYKVPRNPDLGADAVKVQRDEQRKIDEAEQLTDDEIAEKESLMTQGFTNWTKRDFSHFIRANEKYGREDIDNIARDVEGKTPEEVIEYSQVFWERCQELNDIERIMKQIERGESKIHRRASIKRALDIKMSRYLVPFHQLRISYGTNKGKNYTEEEDRFLVCMLHQLGFDKENVYEELQAAIRNSPQFRFDWFLKSRKAAELQRRCNTLIMLIERENQEYEERERLEKKKKAVKENVTLTNGSNGASPAQKAAQKRRAESLNDSKTGKKKKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01288076;
- 90% Identity
- iTF_01288076;
- 80% Identity
- -