Cnas012299.1
Basic Information
- Insect
- Contarinia nasturtii
- Gene Symbol
- crm
- Assembly
- GCA_009176525.2
- Location
- NW:199459-204568[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.5e-07 0.00015 21.5 0.0 4 33 141 170 138 193 0.91 2 2 1.5 1.4e+03 -0.9 0.1 9 25 317 333 316 333 0.89
Sequence Information
- Coding Sequence
- ATGACACCAGGCAAAGTGACGACAAACGATAATGCATCCAATGCAGATTTATCTGTTTTCGCTGAGGTGTCGCAAAAAGACGACGCGCTCACGATTGAAGCAAaagataatataaaaaaaccaattgtGTCTTCTGATACTGACAtatcaaattcgaatgaaagaaacgaaacgaaaaatgacaCGGCACCAAAGCCCAAACCCATTGACGATAAACTTAAACTGGAGACGTCGGAGGAGCAATTGCTTGGTTCATTGACATCGATGAGTAGTCCGGCGGTACGAACTAGTGCCCGAGTTattcagaaaatgaaaatggattcAATTCGACCCACGACGCCTCCGCCTgacaaagagaaagaagaacaTCACCGCAATGCACAGAAAACACCGAATCAACATCGACCTTCAAAAACGATTTGGAGCAATGTtgaacgcaatttattttttgatgctATTAACGAATATGGCAAAgattttgaatcgattgcgaattatataaatggaaaacagAAGCGTAAAAATGCCACCGATCCCACGTACAAGGCCAAGGAGCACGTTAGATTACTCTATTATCAAACGTTcacaaaaatttccaaatatttACGATTCTCGGAAGATGTTACGAAAAAGGTTCAGGAATTGTATGCAATTATCAATTACGgtgaaatgagaaagaaaattcCCGTTGATAATCAAaagttttatatgaaattgcGTGAATTGGTATATCGTGGCTCGGTAACTTGGCGTGTCAAGGGGAAAAATTGCCGAATTAAAACGCCATCGTGCCCGGCACTGCGCAAAATCAATCAAGTTGAAAAATGGCAAGAGGACATAAAATTACCGGCAAAGGTAGATGTTGAATTGAGGCCATCCGATCATGAATCATGGTATACGGTACAGAGTTTAGCGCAGAATCCACGTGTGAAAACGTCGTTACCATTGCAAAAGAGATTAATAAGCCTGATTAAAACATTACAACAAAAGTGGAAGAGTCGAGAGGCAAAACTGTGGGGCCAAACAATAAGCAATTCAGCTCCGAAGCTGAGTACACAGACCGCATCACAAGCGCCAAGCTCTTCAGCCGCATCAACTGTAACACCCACACCGCAATCATCATCTTTAAACGCTTTAGAAACTAGTACAAATGGCGATGCGTCGCAATCAAATTTACAGTCacatttttcaccatttacGGAACCAGTGTTGTGCATTGCACCTTCACTCGATGCCACCATTCATCGTCCGTACGTTAATTTAACCGATTTTTTAAATAGCTATagtatttgtttgaattcctATGAGGAACGGATCAATGCATCCGTTCGGGGTGAAAGTCTTTGTGTCGAGCACATAACAAACGTTAAGGAAACAATCAGATCAAATACAAAGCGTCAGCGACATGACAGCGGTTCGGAGAAGAAAAGTCCCGATACGAAACGAACAAAGGCATCTGATGGTGATAAATTTGATCATGacattatgaataaaaaatcaatgtcaTCCACATCACAAGATGGAATGTCAACCACTGAAGAACTGGTGGACGAACGTGAATTTTCATCGCCAACCTATGAGAATGTTCTGTTCGAAATTGAAGATGCAAATTGTCACATACCCGAATCATCATCGGCCGATGAATGTGAAACGGAAATCAATTTATGGAATGGcagcaaattcaaatttgaatcgaCCGATGAAAAAAGTGCCGTTGTTGATGTCATTAAAAAGGAGTCAACCGATCAACGAATTATCAATAAACCGacgaaaaaaaccgaaaataaatcacaattggcgataaataaaaaacgtgACTTGCGAACAACAAATCGTGAATCGTTTCGGCCATTGATTAACGAAGAGGTTGTACAAAAAATTCGCAAAGGTTGGACCATTTTTAATGTCGGCGATATGACTATTGGCGATTTGTATATTATGTTTGGACAAGATTCAAAAGTTCGATTAGAGTACAAGTGGATTTCAACGGCTCAACAGGTTGACATTAAAACGGAACCCATGAAAATGCCACACAAAACAGATGCATTCgatggaaaagaaaaagaggTGTCCGATGATGATATTAAATCGGAAAATGTGATGACCGGCACTTTAAGCGccacaaataataatgagaTCGCTGATACGAAACCGATTGCCATCGATGCCAAGCCCAAGAATTCGTTGagcaataaattgaaacagtTGCTTCTATTAGCTGGTATGATGGAAAAAACCAAACGGAAAACAAGCTGTGCATGCGGTCATTATTGTGATCGcggaatgaataaaatgaagCAAAAAGATGAAGTGTTGCCTCGtagttttatttcgaataaaacatATCAACCGTCGCATAACGACAGTGCGCTGTTTCGACAACCAGTTTTACCGACGCGCTCAAGCCATTTTGAACAATATCGTATTAACATGAATTCATCGCGCAGCAAACAAAACCGTTGGATGAAAGGTCGAAATAACCGAGCTGCAAAACAAGTTGTAGTTCAACGTATTCTACCACTGCAACCGGGAATTTCACAACCGTATGGAATGTTGGCAGCGCCTGATCCAATTACCTATTCAATTGAAAGTTCAGTGATCAAATCATCgacgtcatcatcatcatcatcttccccatcatcgtcgtcgtcactcgaatataaatcaattttaaccGAAGAAAACTTAAGCAGAATGAATCACCTAACAGAAGACGCTAGTGCCAACCCATACATACGATCAATTGATACAAACTCAAGCAATAGTTCAACAATTAATGCCGACGACAACAACACAACAGACCTTAGCGAACACCAGAAATGTGATAGCGGAATTGAAACCTGTGATATAATCGATTCTGGCACCAATAAGCCGGAATATTCAGCATCTGACGCCGATCAAGTGGAAGAAGTGGACAGTGACGAGGAAGAGAATAACCGCATCAGACAAAGGCTAAACGAAGATCCAGGCATTCAAAGTCTCATGGAAATATCGCTACCATCACCCATTCCAATGGCTCATTCAGTGGACGATTTTTATTCCGATGGAGTTGACAGTCAGCCACCAATAAGCCCGATGAGAATACTGCGTGAATCTCCGGTTCCTTCGGACACAAAATGGTTTGAAGAAAACATGAACGACTTTTCATTGAGCAGTTTTCTGGGACATTTGGATTCGAACTGTGAAAGGGGACGCTCGCCTCGATGTATTGAAAGTAGCAGCATGTCAACGATCAGCGAAACAAGTGTTGACTATATGACCAGATTCGAAGAGTTAactgaatcgttgaaaaacgAACCGAACAATATTGTCACGCCATAG
- Protein Sequence
- MTPGKVTTNDNASNADLSVFAEVSQKDDALTIEAKDNIKKPIVSSDTDISNSNERNETKNDTAPKPKPIDDKLKLETSEEQLLGSLTSMSSPAVRTSARVIQKMKMDSIRPTTPPPDKEKEEHHRNAQKTPNQHRPSKTIWSNVERNLFFDAINEYGKDFESIANYINGKQKRKNATDPTYKAKEHVRLLYYQTFTKISKYLRFSEDVTKKVQELYAIINYGEMRKKIPVDNQKFYMKLRELVYRGSVTWRVKGKNCRIKTPSCPALRKINQVEKWQEDIKLPAKVDVELRPSDHESWYTVQSLAQNPRVKTSLPLQKRLISLIKTLQQKWKSREAKLWGQTISNSAPKLSTQTASQAPSSSAASTVTPTPQSSSLNALETSTNGDASQSNLQSHFSPFTEPVLCIAPSLDATIHRPYVNLTDFLNSYSICLNSYEERINASVRGESLCVEHITNVKETIRSNTKRQRHDSGSEKKSPDTKRTKASDGDKFDHDIMNKKSMSSTSQDGMSTTEELVDEREFSSPTYENVLFEIEDANCHIPESSSADECETEINLWNGSKFKFESTDEKSAVVDVIKKESTDQRIINKPTKKTENKSQLAINKKRDLRTTNRESFRPLINEEVVQKIRKGWTIFNVGDMTIGDLYIMFGQDSKVRLEYKWISTAQQVDIKTEPMKMPHKTDAFDGKEKEVSDDDIKSENVMTGTLSATNNNEIADTKPIAIDAKPKNSLSNKLKQLLLLAGMMEKTKRKTSCACGHYCDRGMNKMKQKDEVLPRSFISNKTYQPSHNDSALFRQPVLPTRSSHFEQYRINMNSSRSKQNRWMKGRNNRAAKQVVVQRILPLQPGISQPYGMLAAPDPITYSIESSVIKSSTSSSSSSSPSSSSSLEYKSILTEENLSRMNHLTEDASANPYIRSIDTNSSNSSTINADDNNTTDLSEHQKCDSGIETCDIIDSGTNKPEYSASDADQVEEVDSDEEENNRIRQRLNEDPGIQSLMEISLPSPIPMAHSVDDFYSDGVDSQPPISPMRILRESPVPSDTKWFEENMNDFSLSSFLGHLDSNCERGRSPRCIESSSMSTISETSVDYMTRFEELTESLKNEPNNIVTP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01288075;
- 90% Identity
- -
- 80% Identity
- -