Cnas013110.1
Basic Information
- Insect
- Contarinia nasturtii
- Gene Symbol
- -
- Assembly
- GCA_009176525.2
- Location
- NW:7107799-7109585[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3e-10 5.2e-07 29.6 0.2 2 86 128 205 127 206 0.80 2 2 3.1e-11 5.4e-08 32.8 0.0 12 88 259 331 255 332 0.83
Sequence Information
- Coding Sequence
- ATGAATGAAATTTCCCCCGAACACAACGAAAAGTTGACGGATGcccgagaaaaaaatcaaaccgGAGATGAAATAGCCGATATTATAAAACTAACTGAAACATCATCAAACAATGCAGATTCTGGTTCATCATTGGTACAAGTAAGTGACTACGATGATGAAGCGACGAATGGAAATTCTTCTGAACACAAGGACGAACTTAATCAAGTCCAACAAAAAGGAGCAGACGATGATATATTGAAgaattttcatgaaaacaGTGAAATCATGACTGAcgcgacagaaaaaaatcaaactgaaCCAGAAATGCGTTTAGTAACgGACGAAATTGAACGTAAGGAAATCCTGACAGCATTGTATGAAGTGGATGATGACCCAAAAcgtaaaatgttttatgatgagttgaaaaaatgtttgacgCTATCTTACCTGATGTTAAATGAAAGACCTATagatttatatacatttttcgtCCTCGTAAATGAACTTGACGAAACTTTATCGAAAGTGAATGACTTGAAGAAGTGGGAAAGTTTTGCTCTAAGATTTGGCATACAAACAAAAGTCGATTTACATGCAAAGGTACTGAAATACTACTACAATCATTTTATGGCTCCACGCAAGAGCACGTTGTTAGCTGCAATATCAAAAGTTGCAGAGGAACCAAACAATGTTTTAGATGCAAAAAGTGCAGGACATGACGTTCACCCAGAAATACAAAGCCAACACTTTATTACTCTATATAACATCGACAATGATCCAAAACGTAAAAAATTTTTTGATACGTGTAAGATATGTACACATCAAATGTTGATAATCAAAGGAAACCCGGTAGATTCATATAAACTGTTCGTTTTCATAGACGAACGCGGTGGCATTAAATCAGAGGACATTATTCAGTGGAAAGAATGCGCCCTCTCCCTTGGCttacaaacaaatgaaaatgtattgaatgcATTGATGTCTTTTTATGATAATCATTTGGCACCATACAGGGATTTATTGTTGGCAGCAATATCAGAAGATTTCAATTCAGTGGTAAATGACTGCGATGGTGTAGCGATGAATGAAGATTCTCCGGAACACAACGAAAAGTTGACTGATGCCCCAGAAACAAATCAACCCGAAGAAACGACAGAACAATCAAGCAATGATCAGATTATGAACACAAAATATGCATCGGCGGATCAAAATGATGGTGAAccaaaacgattgaaaaaacgaaaacgtgTTAGTGCACCCAGTCGTCGGTCAACtcgagcaaataaaaaaataaaaatacttgaaaacattttgattaGACCAAAATCAACCATATAA
- Protein Sequence
- MNEISPEHNEKLTDAREKNQTGDEIADIIKLTETSSNNADSGSSLVQVSDYDDEATNGNSSEHKDELNQVQQKGADDDILKNFHENSEIMTDATEKNQTEPEMRLVTDEIERKEILTALYEVDDDPKRKMFYDELKKCLTLSYLMLNERPIDLYTFFVLVNELDETLSKVNDLKKWESFALRFGIQTKVDLHAKVLKYYYNHFMAPRKSTLLAAISKVAEEPNNVLDAKSAGHDVHPEIQSQHFITLYNIDNDPKRKKFFDTCKICTHQMLIIKGNPVDSYKLFVFIDERGGIKSEDIIQWKECALSLGLQTNENVLNALMSFYDNHLAPYRDLLLAAISEDFNSVVNDCDGVAMNEDSPEHNEKLTDAPETNQPEETTEQSSNDQIMNTKYASADQNDGEPKRLKKRKRVSAPSRRSTRANKKIKILENILIRPKSTI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -