Cnas007439.1
Basic Information
- Insect
- Contarinia nasturtii
- Gene Symbol
- slbo
- Assembly
- GCA_009176525.2
- Location
- NW:3937571-3946578[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.9 1.2e+03 -0.8 0.3 32 46 187 201 183 204 0.58 2 2 4.7e-13 3e-10 39.6 9.7 3 62 360 419 359 422 0.95
Sequence Information
- Coding Sequence
- ATGGAATCACCTCAAATGTATGATAGTCCGCAACAGCAAGCAATAAACCAAAtggatattaaaaaaatggccACGAACAACAATAACGGTGCATCGGTGAATGGTAGTGGCAATGGTACAACGAATACCgcacaaaacaataataatacagCAGTGGTGGCGACGACGGTGGCCGGTCTCAATCATAACGGTTTGAttgtaaataaacaacaagGACAATTGCATTTGCAACAGGCcaccaacaataataataataataatacaaataataataacaataataatgtgcTGTTACAAAAGCAAATTCTACAACATTATTCCGCACAAAATGATCTCGACGAGTTGACGTCTCAGGAAATAAGCTTAGATCTACAACATTTAATCGACGATCAATTTCGAGATCAAGAGGGTTTGGGCATCTTCTCCGATTTGGTaccaaatacaaataacaacgccaccaccaccaccaccaacaacaacaacaacaacaacaataataacaataacaatagtGGATCACATGCGAACGCCAATCAAAATGGTTCGACGGCGACAGCGGCCAAAGTGCTACAAttgcaacaacagcaacaacgcATGAACCAACAAGTTTATCCACGTGCAGCGCTCGCCTATATGCCACAGGCCGTACATACTGGGGCCACATATGGAAGCAACAATTCAAGCGACGAAAACAGTTCCATTGGTTCAGATGCTACGAATATCAAAGAAgaattgaatgaacaaaattcacaCTTGAATTATACTTGCTCGTTGCAGGAGCCAGTTGAACCGCAAGAATATCGTCGTTTGGCCGCAGCAGCGGCTGTTGCTGTAAATGGTGGCCAATTTATTGGTGTGGGTGGCAATCAAAATGTGGCCGTTGGCAGTGGCGGTCTCTATCAAATACCACCAAATTATGCATCAAATGGTAGCGGCAACACATTCACCACATTATCAACGCCAACACTACATCATCAAGGACTACCGCATTTATCCGGCAATCATTTGGTCAATTTAAAGCataaacaaatgatgaatCAACGTAAACAAAACGGTAAGCATATCGATAAGGGTACGGACGAATATCGTCGACGACGCGAACGTAACAATATTGCCGTACGAAAGAGTCGCGAAAAGGCAAAGGTTCGTTCACGCGAAGTTGAAGAAAAGGTGAAAACACTGATCAAAGAAAAAGATGCATTGATACGACGTCTCGAAGAAATGacaaacgaaattcaattgcaCAAACAATTGTACGTGCACTTAATGAATCACAACAATCCAGAAGTAAATAATATCTGTCGTAATGTATTAAGCTTAGTTAGTAACGATCACGGTATGTGA
- Protein Sequence
- MESPQMYDSPQQQAINQMDIKKMATNNNNGASVNGSGNGTTNTAQNNNNTAVVATTVAGLNHNGLIVNKQQGQLHLQQATNNNNNNNTNNNNNNNVLLQKQILQHYSAQNDLDELTSQEISLDLQHLIDDQFRDQEGLGIFSDLVPNTNNNATTTTTNNNNNNNNNNNNNSGSHANANQNGSTATAAKVLQLQQQQQRMNQQVYPRAALAYMPQAVHTGATYGSNNSSDENSSIGSDATNIKEELNEQNSHLNYTCSLQEPVEPQEYRRLAAAAAVAVNGGQFIGVGGNQNVAVGSGGLYQIPPNYASNGSGNTFTTLSTPTLHHQGLPHLSGNHLVNLKHKQMMNQRKQNGKHIDKGTDEYRRRRERNNIAVRKSREKAKVRSREVEEKVKTLIKEKDALIRRLEEMTNEIQLHKQLYVHLMNHNNPEVNNICRNVLSLVSNDHGM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01287847; iTF_00132977; iTF_01350423;
- 90% Identity
- -
- 80% Identity
- -