Cnas001259.1
Basic Information
- Insect
- Contarinia nasturtii
- Gene Symbol
- Xbp1
- Assembly
- GCA_009176525.2
- Location
- NW:524911-527964[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.7e-14 1.7e-11 43.6 16.5 2 60 46 104 46 109 0.93 2 2 0.0062 3.9 7.2 2.1 29 58 87 116 86 118 0.89
Sequence Information
- Coding Sequence
- ATGAGTGCAAATGTTTTAATGGCATTGCCGAAATACGTATCCATTCCAAATAAGAATGGACTGCCGATTTCGGCGGATCCAATCGAAAGTTTCATTGGTTGCGGCAAAAAACGTCGATTGGATCATTTGACATGGgaagaaaaattacaaagaaaAAAATTAAAGAATCGCGTTGCCGCACAAACATCACGCGATCGAAAAAAGGCCAAAATGGATGAAATGGATCAGACTGTGAAGCGATTAAGAGacgaaaatgttaaattaaaagaGCAAACTGAACGTTTAACTGCTGACAAAGAGGAATTACTGAAGCGTACCATTGAATTGGAGCGATGCTTAAACGATTTGCAAGGCCatcaatttgatattgatgAATCTGCTGCTGCTAAATTGTCACACAAACATCatcaatcaaatataaaaattgagtCCACATATGATTCGCCACCGTTGAGCGATCGTTGGATTGGCTGTGGtattatgaataataatgGATCTGCTGTATCCGCCTACCCTCTGCCGAAGGGATCTCAAATAAAACCACAGTCGATGCGACGATCAGACAACACATGCAACAATTATATGACAGCGACtcaacaccaacaacagcaacagcaccATCAACAACAGACATTGACACCGCCGTCGACACCACCGCCAGCCCATCAATCGCAACCGTTCGAATTAAGCAAGAGAGCAACAACCAGCAGCAGCAGTCGAATCAATCAACGTGCAACGTCGATGGACGAAATGCCCGTGAATTTGAAAAGCAACTCCGACCAAGCTGCTCTGTGGAAGATTATTGCTCTATGTCTTCTACCGGACTTGTTCGGGGATATCGAAGATTTCGATGCCAGTGGATTGGAAGAGCTTGCCGAAAGTTTATTCGCAGATGTCTCAACAGagtttgaaaatgatgttaCAAAAGGCGGCCACCGAATTGCCCAAATTGAAGGCGAACCAAAGTCAATGTTTAGATCAATGGTGGGGACCCAAACAGAAAACATGGAATCCAGCGAAGATACCCATGGAAGCTTAAATACTCCCATCCATAAACCATCAATGGTTCGTACAATCAAACAGGAAATCATTGATAGCATGACATCCGATGATGATCAATTGTACGTACCAACAGCACCAATCGCACCCGAAAATCAATTACAATCAATACAACATATGCATTTTGATCACACACAATTCAATCACAGTGAGGAAATGTTTGACAACATCAATCATAACAGTagcaacaacaccaacaccacaacaacaacaacaagtcACACAAATGACACGACAGATAAATCTATGATATTATACCAGAATGATAACAATGTCACTATAACGGACGAATATGACACATTGTATGAAACCACAACATACGACGATGAAGGGAATCAAATCACCATCATTCTACCAGATGAAGATATCAGCAATTTCGAAGAGGTGATTGAAGAAGTTCCACAGAACGAGGATGaggatgatgatgaaattatGTCACACGTATCGGTCTTATCGCCAATACCATCGATAAACTATGCATCACCCGGTGGCTATAGTCACAACAGCAGTATCGATGATCCGACCGCTGGTTCAGATCACGACAGTGCATATGATTCGGTCATCAATTCACCGCCGGCGACCAAACTGTCATCATCATGGTCAATTGACGATGATTATGTATACTTTAATAATagtaacaataataattactGGCCGCAAGATTCATTTTCCGAACTATTTCCCACATTGGCCTAA
- Protein Sequence
- MSANVLMALPKYVSIPNKNGLPISADPIESFIGCGKKRRLDHLTWEEKLQRKKLKNRVAAQTSRDRKKAKMDEMDQTVKRLRDENVKLKEQTERLTADKEELLKRTIELERCLNDLQGHQFDIDESAAAKLSHKHHQSNIKIESTYDSPPLSDRWIGCGIMNNNGSAVSAYPLPKGSQIKPQSMRRSDNTCNNYMTATQHQQQQQHHQQQTLTPPSTPPPAHQSQPFELSKRATTSSSSRINQRATSMDEMPVNLKSNSDQAALWKIIALCLLPDLFGDIEDFDASGLEELAESLFADVSTEFENDVTKGGHRIAQIEGEPKSMFRSMVGTQTENMESSEDTHGSLNTPIHKPSMVRTIKQEIIDSMTSDDDQLYVPTAPIAPENQLQSIQHMHFDHTQFNHSEEMFDNINHNSSNNTNTTTTTTSHTNDTTDKSMILYQNDNNVTITDEYDTLYETTTYDDEGNQITIILPDEDISNFEEVIEEVPQNEDEDDDEIMSHVSVLSPIPSINYASPGGYSHNSSIDDPTAGSDHDSAYDSVINSPPATKLSSSWSIDDDYVYFNNSNNNNYWPQDSFSELFPTLA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -