Cnas005595.1
Basic Information
- Insect
- Contarinia nasturtii
- Gene Symbol
- Jra
- Assembly
- GCA_009176525.2
- Location
- NW:16715-22834[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.9e-17 4.4e-14 51.9 5.4 2 65 234 297 233 297 0.96
Sequence Information
- Coding Sequence
- ATGAAAGCGATAAAAATGCACGAAAATCGGAATAATAATATGGAATCATTTTACGGCGATAATGGACAGTATGTTGCTGCCGCTActaccacaacaacaacacaaacacgATCAACACGTAACCTCAAACGGCCGGAAAGTTTGGATTTAAATTTAGCCGccaacaataataaacatCCCAGTGGTAAAAGGGCACGTTGTCAAATCCCATCCGCTGTACTTGCCTCACCCGATTTAAATATGCTGAAATGGGGCACACCCGACCTCGAAAAATTTATCATGTCGAGTGATCCATTACAAACGCCCACACCTGGTTTGGGAATGTTTGCTCCCACTACGATAAAGGAAGTGACAAACGAGCAGGAAGAATATGCGCAACCATTTGTGGACGCGCTCAATAACTTACGAAACAGCGATAAAGCACATCTACACATACAATCACATCAGCAACAGcaaaatcaacagcaacaacaacaacaacaaaacgaattcACAACATCAACCGGTGCCATTGTGGCGAATCCAGCCATTACCACTACATCTTCTACGACATCGACCATTCTAAGCAAAGTGGGTATGAGTGGTGGATCAGTGACGTACACAAACCTAGATGATAGTTACCCAGTTACAATAAAAGATGAACCACAAACTGTACCAAATTCACCGCCAATGAGTCCAATCGATATGGAGAGTCAGGAGAAGATAAAATTGGAGCGAAAACGTCAACGAAATCGGGTGGCGGCATCGAAGTGCCGTAAACGAAAATTGGAACGCATTTCAAAGCTGGAGGATAAAGTAAAAATTCTCAAAGgcgaaaacattgaattgagtGGTGTGATCAAAGGGCTCAAAGAGCATGTGATTAGTTTGAAGCAGAAAGTCATAGAGCACATAAACAATGGTTGCAGTATACCAACAGCATACTTTGTTCGGTCGTCAAAAACTGACAGTGATATTAAGTAG
- Protein Sequence
- MKAIKMHENRNNNMESFYGDNGQYVAAATTTTTTQTRSTRNLKRPESLDLNLAANNNKHPSGKRARCQIPSAVLASPDLNMLKWGTPDLEKFIMSSDPLQTPTPGLGMFAPTTIKEVTNEQEEYAQPFVDALNNLRNSDKAHLHIQSHQQQQNQQQQQQQQNEFTTSTGAIVANPAITTTSSTTSTILSKVGMSGGSVTYTNLDDSYPVTIKDEPQTVPNSPPMSPIDMESQEKIKLERKRQRNRVAASKCRKRKLERISKLEDKVKILKGENIELSGVIKGLKEHVISLKQKVIEHINNGCSIPTAYFVRSSKTDSDIK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -