Cqua016235.1
Basic Information
- Insect
- Conops quadrifasciatus
- Gene Symbol
- stc
- Assembly
- GCA_949752815.1
- Location
- OX457080.1:11475183-11478974[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 2 2.7e+04 -4.4 1.5 14 18 426 430 426 430 0.87 2 13 2 2.7e+04 -4.2 1.6 15 19 470 474 469 474 0.81 3 13 0.063 8.3e+02 0.7 0.2 4 10 503 509 502 510 0.95 4 13 4.8e-06 0.064 13.8 16.9 4 19 517 532 515 532 0.94 5 13 8.9e-07 0.012 16.2 12.1 3 18 570 585 568 586 0.92 6 13 8.7e-08 0.0012 19.4 19.8 1 19 626 644 626 644 0.98 7 13 1.1e-05 0.14 12.7 13.8 4 18 692 706 685 707 0.86 8 13 0.046 6.2e+02 1.1 12.1 1 11 747 757 747 769 0.91 9 13 9.4e-10 1.3e-05 25.7 14.2 1 18 774 791 774 792 0.97 10 13 2 2.7e+04 -8.8 11.9 4 18 833 848 829 849 0.75 11 13 1.3e-06 0.018 15.6 15.1 1 16 885 900 885 911 0.90 12 13 5.1e-06 0.069 13.8 14.2 1 19 918 937 918 937 0.96 13 13 0.64 8.5e+03 -2.5 0.9 7 12 952 957 946 957 0.68
Sequence Information
- Coding Sequence
- ATGTCAACGGAGCCTTATGCTCCTAATACGTCAtcgcaacaacaagaacaatccTCTGAGTTATGGCAACGTTTTCTAGAAGATGGACACACCTCCGCtgaagcagcaaacaacgttGCATTACAAGGCTTACCCATGGCTAgtcagcagcatcagcaacacaataacaactatgtaaattttaatcaattcaTCATGCAACACAACCTCTTTGGAGGCAGTGCCAATACCAACAGTTCTGAACTTTGCTCCTTTGGTGATGGACTCTTCAGTTCTAATGGAAATACGTATGACTTGTGTGCTACACCGGATGCAAATTTCTTCAATCCTGGCAATAGCTCTTCCAATTCTCAACTTTTTCCTTACAACAACGACGGCGATTCAAGAAGTGATTTATGCACTAACAACGGAAACGAACATTTGTACGACAATCTCTACACTCCATTTGGGGCTGGAAATAGACCTCCGACCTACTTTACTAACCCCTTTGCTACGGGTTTTGATTTCAATGCTGTAAATTCACCTTTGTCGAATCTTCAGGCTACTGCGCCAGAGTTCGTGCCTCGCTTTAACAATTTATCGTTACATGAAAGATTGCAGAACAGAGATCGGCTGAAAGATGGTAACCcaataaaagatttaaaacCCCAAGTCGAGAGTTTAGAGGGAACTAAAAAACATGATATTCAGGACACCGAGTCATGTGCTGCTATATCAGCTGCGACTGTCCAACAGTCGTCATCTAGCACTGATGCTAATACAATAGTCACTCCTGCTGCAAACATAATAGTAAAACCAACAAATAATGTCGATGATAACCAGAATAATATTTTGAGGGCTCCTTCGAACGGGTTTGCAAGTCGTAATGAAAACTCCTTTGAAAACGTTTCTTCACGTGAACGAGAACATCGCAGTGACCGCGAACGTGACCGCCGCTATTCCAATGGGCGTCGTTCCATGGATTTTCATGAACGCGAGGATCGATATGATCGGACTGAACGTACCTCGGAACGATGTTCTGGTCACTCTGTTCATCGCGGTAATAATCAACGCGACCGCTACGACAACCACCGCAGTAATAAACGCCGTGACGATTGGAATCGTAATCGCGATCGTATTAATGGTTTTCGCGTAGACGAGAAATATTCATCGGATAATGGCAAAGACAGTCCACTGCCATCCCCCGAAAAGAGATCTCCCAAGAAAATCTATCCAGAAAATGAAAAGCTTTCCCAAagggaaaaattaatacgTGACATTGAAACCCGCCGCCTTGAGTGTCCGGTCTGTGTTGAGCTCATTAAAGCGCATCACTCGGTTTGGTCCTGCCAAAATTGCTACCACATCCTTCATTTGCAATGCATCATAAAGTGGGCCTCTAGTTCGAAATCTGATGCTGGCTGGCGTTGTCCAGCTTGTCAAAATGTGGTAAAGGACGTGCCGCGTGACTATTATTGCTTCTGCGGAAAGCAGAAAAATCCAACGTATACGCGTCAAGACACAGCACATTCATGTGGTGAAGTCTGCGGACAAATCGAAGGCTGTCCACACTCATGCACTCTGCTTTGTCATCCAGGACCTTGTCCGCCGTGCCAAGCAAATGTGAAGCGCGAGTGTGGTTGCGGCAGAACCACTCGAGTTATGCAGTGCTGTTTAAAAGAATCGATTGAATGTGATGCCATTTGTTCCAAGCTCCTTAATTGCGAGCTCCACACTTGCTCCGAGAAGTGTCACATTGGGAAGTGCCCTCCTTGTGTGGATAAGGTAGATCAAAGGTGTCATTGCACAAAGCAAGAGCGGCAAGTGGCTTGCACACGTGACTCGCACGACAAACACAACTACTCATGTGGCAAGCCTTGTGGACGCGACTTGTCTTGTGGCAACCACAAGTGCAAGGATTGCTGCCACCCTGGCGACTGCAGGCCGTGCAAACTGAGTCCTGAGGTGGTAACTTCGTGTCCGTGTGGAAAGATGCCTGTAGTGCAGGGTCAACGAACTTCCTGTCTGGATTCTGTTCCGATCTGCGAAGGAATATGCGGCAAGACTTTACGTTGTGGCAAGGCCGCTAATCCGCATCACTGCACCAGTAAATGCCACTTGGGCAACTGCCCTCCTTGCAACAAGCAAACTGCTGTAAAGTGTCGTTGCGGCCACATGGACCAAATGATAAAGTGTCGCCAACTGTCTACGCGTGCGGACGACGCTCGCTGTAAAAAGCGTTGCGTCAAGAAGCGCTCCTGTGGCAAGCACAAATGTAACCAGGAGTGCTGCATCGACATTGACCATATTTGTCCATTGCCATGTAACTACACGTTGTCGTGTGGAAAGCATAAGTGCGACCAATCGTGTCATCGGGGGAACTGTCCTCCATGCTATCGCAGTTCTTTCGAGGAACTCTATTGCGAGTGTGGCGCTGAAGTTATATACCCGCCGGTGCCCTGCGGCACCAAACGACCCATCTGTAAGCGATCCTGCTCTCGTACCCATCCTTGCGACCATACGCCACAGCACAACTGCCACTCTGCAGCCACTTGTCCGCCATGCATGATCTTCACTATCAAATGGTGCTTTGGTCACCATGAACAACGCAAAACCATTCCCTGTTCTCAACAGAGTTTTAGCTGCGGCTTGCCGTGCCAGAAGCCGCTTCCATGTGGCCGCCATAAATGCATACGTTCGTGCCACGAAGGAGCTTGCCAACAGACACCGCATGAGGTGTGCAAGCAAAGCTGCACTACGTTACGGGCGACCTGTGGACACAAGTGTTTGGCGCCATGCCACGAAGGTGTCTGTCCGGAGTCACCATGTAAAGAAATGGTCGAAGTTCAGTGCGAATGCGGCAATCGTAAGCAACAACGTTCCTGTCATGAACTGGCTCGTGAATACAGTCGGATAGCTACCGCTCAGCTTGCTTCCTCCATGGCTGAAATGCAGCGCGGAAATTACATGGAACTAAGCGAGATTTTGGCTCCAGTTAAGATGAACAAAACTAACAAGACGCTTGATTGCAACGACGAATGTAAGCTTGTGGAGCGTAATCGTCGTCTGGCTGTAGGTCTTCAAATACGCAATCCAGATTTGTCGCAAAAACTAATGACGAAATATTCCGATTTCATACGCAACTTCGCCAAACGTGACCCCGCGCTGGTAAAATCTATCCATGATGCACTCACTACGCTTGTGAAATTAGCCAAGGAAAGTAAGCAGAAGTCGCGCAGCCATTCGTTCCCGACAATGAATCGGGAAAAACGGCAGTTAGTTCATGAGATGTGCGAAGCCTTCGGAGTCGATTCGATAGCCTACGACGCAGAACCGAACCGTAACGTGGTGGCAACTGCACACAAGGACCGGTCCTGGCTGCCTGCCACCAGCATCATGGAAATAATACAGCGAGAAGCCGGACAGCGGAGAGTGCCGGTTCCGAGCAATAATGCTTGGGGAACCaaaagatag
- Protein Sequence
- MSTEPYAPNTSSQQQEQSSELWQRFLEDGHTSAEAANNVALQGLPMASQQHQQHNNNYVNFNQFIMQHNLFGGSANTNSSELCSFGDGLFSSNGNTYDLCATPDANFFNPGNSSSNSQLFPYNNDGDSRSDLCTNNGNEHLYDNLYTPFGAGNRPPTYFTNPFATGFDFNAVNSPLSNLQATAPEFVPRFNNLSLHERLQNRDRLKDGNPIKDLKPQVESLEGTKKHDIQDTESCAAISAATVQQSSSSTDANTIVTPAANIIVKPTNNVDDNQNNILRAPSNGFASRNENSFENVSSREREHRSDRERDRRYSNGRRSMDFHEREDRYDRTERTSERCSGHSVHRGNNQRDRYDNHRSNKRRDDWNRNRDRINGFRVDEKYSSDNGKDSPLPSPEKRSPKKIYPENEKLSQREKLIRDIETRRLECPVCVELIKAHHSVWSCQNCYHILHLQCIIKWASSSKSDAGWRCPACQNVVKDVPRDYYCFCGKQKNPTYTRQDTAHSCGEVCGQIEGCPHSCTLLCHPGPCPPCQANVKRECGCGRTTRVMQCCLKESIECDAICSKLLNCELHTCSEKCHIGKCPPCVDKVDQRCHCTKQERQVACTRDSHDKHNYSCGKPCGRDLSCGNHKCKDCCHPGDCRPCKLSPEVVTSCPCGKMPVVQGQRTSCLDSVPICEGICGKTLRCGKAANPHHCTSKCHLGNCPPCNKQTAVKCRCGHMDQMIKCRQLSTRADDARCKKRCVKKRSCGKHKCNQECCIDIDHICPLPCNYTLSCGKHKCDQSCHRGNCPPCYRSSFEELYCECGAEVIYPPVPCGTKRPICKRSCSRTHPCDHTPQHNCHSAATCPPCMIFTIKWCFGHHEQRKTIPCSQQSFSCGLPCQKPLPCGRHKCIRSCHEGACQQTPHEVCKQSCTTLRATCGHKCLAPCHEGVCPESPCKEMVEVQCECGNRKQQRSCHELAREYSRIATAQLASSMAEMQRGNYMELSEILAPVKMNKTNKTLDCNDECKLVERNRRLAVGLQIRNPDLSQKLMTKYSDFIRNFAKRDPALVKSIHDALTTLVKLAKESKQKSRSHSFPTMNREKRQLVHEMCEAFGVDSIAYDAEPNRNVVATAHKDRSWLPATSIMEIIQREAGQRRVPVPSNNAWGTKR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -