Basic Information

Gene Symbol
srp
Assembly
GCA_949752815.1
Location
OX457078.1:6994396-7016762[+]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.4e-19 1.5e-15 57.0 5.4 1 35 1193 1226 1193 1227 0.97

Sequence Information

Coding Sequence
ATGAAAACGACCAAACCGAAACGACAGCgccacaacaacaccaacaccgccaacaccaccaccaccaacaacaacaacaacaacagcaatagcaataaGGACAGCCACTACAGCAAGGATATAATCAAATCATCGCGCGGTACTACCAATCTCTTGGCCAGTGCTGCCAAAATGAAGATCACCAAAGCCATTGTCAATGCGAAAGCGGcgaacggaaacggaaatgcGGGCGGCTCCTTGGCGGCTATGATGTTGGGTGGCGCCGGGGCAGGAGGTGTGGAGAAACTCAGCTACTTGGGCATACAAGGAGCCGCTCTGCGCTTGAAGGTGATGCCCATTGAGGAGGCAGGACGAACGCAGGCGACGATCGTGACGTCAGCGCTGAGCGCCGGGAACAATGCGGTGGGAGGAGCAGCCGAAATGGAGGATCGTGAAGGTACGAACGCGACAAGAGAGCCTGAAGTGTGCGCGCAACTGAAAGAGATGCCAACAGAGCAGGAATTGCTGAAGTCACCGCAAGCACAAAAACCATTTCACCACCATTTCAACCACcacaaacaacagcagcagcaacaacaacaacgccagtGCATTTCAACACACATGCTGTCTCGgtcgccaccgccgccgccaccatcgCCAGCGCCCTCACcatcgcagcagcagcagcagcaggcggCTACAGCGCTCATGAGaacaaaaatagcaataacggcaacaacaacaacaacaacaacgacaacgacaaagGCAACGACAAAGGCAACGACAAAGGCAacggcgacaacaacaacaacaacaacaacaacaacaacaacatcattgGCACTAATGACGGCATGCTCGCTAGCACCGCCTGGAACATCTGCGTCTGCGTCTGGCTCTGCGTCAACGTCGACGGCGACGCCAATGAGCGAGACAGCGATTTCCAATTTGTCGTCGTTAACGTCGGCGACCAAGCAGTTCCTATCAGTCGCCAACGGAACACTCAACGAAACGGTGTTACGTGCCtcagcaatagcagcagcagcgccggCAACGAGCACCCAGCAGGCCTCATCATCAGCGCCGTTGTTGTCGATCGAGGCAACAGAAGCGACGACGTCATTGCGCGTGAAAATCGAACAtagtttttgtgaaaataagcAAAAGACGAGTTCGCTAAAAAATATTGCCGATAGTGAGAaagcgataacaacaacaacaacaacagcaattgtGCCGGTCGCTAatataacagcaacagcagcggcggcggcagcggcagcagcaaaatCGGTAATAAAtagtacaataacaacaacaacaacaacaacaacaacaacaacaagtgtcGGTGGAGTCGGTGTTAgcaaaagtgttgaaaatagTGCGGTGGCGTCTGCGACGGTGACGGAAGAGGAAGCAGATGATAAAAGTTACCTGCAGCAGCAGGAaagtgaacaacaacaacaacaacaacagaaaatacTGACAACAACGAATGCACAGACTGAGATTTTACCCATTAATTATCGTGGCCTAAACAATTCAGTTATTATAGCGAATTTCAGCAATAGCAGCAATaaccatcagcagcagcagcaacagcagcagcagcagcagcaacaggaAGAGCAGGAGCAAACGGCTTTGTTGTACCAAACGGAGCACACGGAGCAGCAGTATCTTCGTTATACGCACGAACTGTTAGTGGCGGAGAGTCAGACGCAGCAACAGCTGCTAGccacacagcagcagcagcagcagcagcagcagcagcaacacatACTCAGCAGCACCAACGATCCCAATTTGAATCTGGCCGTAGCAGGTCTGTTAAGCCAACAGCATCAACAGGATActcaccagcagcagcagcagcagcagcagcagcaacatatGTTAGCCACATACAATAATTGGGCTTACGACCTGTCGCTGCATCAGCAGCATCGCGATTTTGCTGAGAAAGCCAATAATGAATTGGTCGctttgcagcagcagcaacaagaacagcagcaggagcagcaacagcatcataTTTTATTATCCGCGCATTTGACACAGCCGCAACATTATTTACAatcacaacagcaacagcagcagcagcatcagcagcagcaacatcactACGAACACCCTTCGGACACGATCAGCAAcgcgagcagcagcagcaacacagCCAGCAACAACGAGCTCAGCAACAACATGCGCAACAATTTCGCCCTCTACACCACGTACGGCGGGcagcagcagcagcagcagcagcagcatcacaGCAGCAACGCCACGCCCACCAGCATCGACGAGGTCATCCAGGATACTCTGAAAGACGAATGCATGGACGATCATCACTCCGGCGTCAGTTACTTGACCCTGAGCTCGGTGACCGATCTGCAGGCACTCAAGGAAAGTtatgagcagcagcagcaacaacaacaacaacagcagcaacagcagcagcagcatcatctgCAGCTAACGCATgaacaacagctacaacatCACAATCATTTACATCAGCAGCATTCCCTtcttcatcatcaccatcagcatCCGCATCATTCGCAGACGCATAGCAATCAGTCGGCCAGTTCGGATGCTGGTGACTCACCAGCGTCACCAACGACaatcggcggcggcggcggaggaGGAGTAGGTCATGGTGCTGAGGTAATCGGTACACCGCTGCAAAGCTTTACACAACTAACGAATGCAACAACACACCGCGACCTTTACGGCAATCTAACGCCCGAGCACACGCCCCTCGCCTACTATCCATCGCCGCTAAGTCCGGTGCTGTCCAGCAGCTCAGTCTACGCTGGACCATTGCTGACATCGGCAGCGGGTGACATGCAGTATGGAATGCAGTCTGCGTCATCGCCGGCACATCAGCACACGGCAATAGCGGCCAACACAGCGGCCACGGCGGCAGCGGTGGCTGCAGCAACGGCCGCCGTTAGTGGCCAAAATTCCGGCTCAGGTTCCATTAGTCCAGCGGCCCTGGTCGATGAATACGGCTCGCCCAAGAGCCAGaacggcagcggcggcggcggcggcggcacatTGCCGGCATTCCAACGCATTGTGGCCTCAAATTATGGCGGCATCGGTGTTGCGGGTGTAAGCAGCGCCAGCGTTGGCGGCGCCGAGCGTTATACATCGTTGACAAATTATCGCACACACAACGACGGTTGTTGGCCTGCCGCGCACTACGAAGCGATTAGCTACGCTCCCAGCCCGGTggtcagcaacaacaacaacaacaacaacaacaacagcggcacccagagccacagcaacaacaacctgaGCAGCACGAATGTTATACGCAGCCTCAATGGGCGCGCGGTCACGGATGGCGGAAATGGTGCGGTAACTGCTGTGGGTCTGGCGGCCGCGGCAGCCGCATCGGCGCATTTGTCCGCCTCGGCTTCGTTGTCAGCAATGGCCGCTGAGTCAAGCGCCGATTTCTATAAGAGCTACAATCCGTTCAGTGCGCCCAGTCGAACAGTCGTCACGGCATCTACCGAGGAGCACGTTAGTCGTTCAAGTTCGCGACGTCTGAGCGCTTCTCGTCGTGGAGACCTCTCCTGCTCAAACTGTACGACCAAGACTACGTCGCTGTGGCGTCGAAATCCGAACGGAGAGCCCGTGTGCAACGCGTGCGGCCTTTATTTCAAGCTGCACCACGTCAATCGTCCGCTGACCATGAAAAAGGAGACTATTCAGacGCGCAAGCGGAAACCGCGCGGTGGTAAAGCGGAAAAGTCgaataaaaattcgaaaaaccaTAGCAGCGCTGGCcaaaataatagcaacagcaacaacaacaacaacaacaataacaacagcagcaacaaccacaattcGGCATCTTTACTTCTCCCTGACTCAAAAATAGATCGTCCCGTTTGTCAACTCTTGGCTCAACTAAAGAGTTCTGTCTCGTTTCCGCGCGATCTGGCCTCGGTTTCTCGTAGTCTGTTTAAAGTTCTGCGAGTTTTGCGTCTCGCCGGATGGTCTTGGGTTTCTGGTACTGAGTTAAAAGAGTTGACTAATAACttgcaaaagcagcagcaacaacaacaacaacaacaacagtccaAGCAAAAGCACCAACAATTGCAACAGAATTCATCACTGACGCAATCGGCAGCAAGCTCACCAACGAACAGTATACCATCGCCAACACCGTTACTGTCATCAACACTGATCGCCGATCCAACAGTGCCGTCGTCACCGCTACTTTTgcaacagcatcagcagcagcagcaccagcagcaacagcaacaacaacaacaacaacaacaacgggcACACCGTCATCATTCTAATCTAAGCGGTGATGGATCATCGCCATTGCAAGATTTTCAACCATTATCACCAATGCATTATGGGTCACCGCTAATGTTGTCATCCGATTCGCCAACacataatcatcatcagcatcatcatcatcatcatcaattaataagcaacaacaacaacaacaacaacaacaacggcactaatggcagcaataacaacagtaacaatagcatcaacaacaacaacaacaacaacactaacaccTCATAccaccataacaacaacaacaacaacaacaacaacaatgataacagtggcaacaacaacaacaacaacaacaatataaaattcatGCAGAAATATCTACAAActcatcaacagcaacaacaacaccaccaccaagagcagcagcagcagcagcagcagcagcagcagcaagcgcTTGCCTTGCAACTTATTCAATTGATGCCGTCGCCAACGTCGCCGACGACGCTGATAACAAACACGCTgaccacaacagcaacaacaacaacaatgccagGCTCTCActtgcaacaacaccaactcCAGCAACAACATCCGTTGCTGCAACATGGCCAGCAACACACGATCTTATCTAGCTGCAGTCCAGATCAGTCGCCAACATATTCCAGCTACAATGAGTTGGGCGTGATGGGCGTGGAGGGCGTGGAGGGTGTGGATCCTACAATAAGCATCAAAGTCGagcaattgcaacaacaacaacaacaccaacaacaccagcagcatCTGCATCAACGTCAACAACATTTGCTGCAGCAGCATACGGTCTCTATGAGTCGCAGTCCATCACTGGAAGATGATTACGACCATCATtaccatcagcagcagcaacaacaacaacaacaacaacaacaacaacatgtttTCCAGCTGCACGCCGTGGCCCAACAACACTTACAAGAGTTTGAGCGCAAGTTCGACCGTGAGACGGTGGTGAAAATGGAGTGA
Protein Sequence
MKTTKPKRQRHNNTNTANTTTTNNNNNNSNSNKDSHYSKDIIKSSRGTTNLLASAAKMKITKAIVNAKAANGNGNAGGSLAAMMLGGAGAGGVEKLSYLGIQGAALRLKVMPIEEAGRTQATIVTSALSAGNNAVGGAAEMEDREGTNATREPEVCAQLKEMPTEQELLKSPQAQKPFHHHFNHHKQQQQQQQQRQCISTHMLSRSPPPPPPSPAPSPSQQQQQQAATALMRTKIAITATTTTTTTTTTKATTKATTKATATTTTTTTTTTTTSLALMTACSLAPPGTSASASGSASTSTATPMSETAISNLSSLTSATKQFLSVANGTLNETVLRASAIAAAAPATSTQQASSSAPLLSIEATEATTSLRVKIEHSFCENKQKTSSLKNIADSEKAITTTTTTAIVPVANITATAAAAAAAAAKSVINSTITTTTTTTTTTTSVGGVGVSKSVENSAVASATVTEEEADDKSYLQQQESEQQQQQQQKILTTTNAQTEILPINYRGLNNSVIIANFSNSSNNHQQQQQQQQQQQQQEEQEQTALLYQTEHTEQQYLRYTHELLVAESQTQQQLLATQQQQQQQQQQQHILSSTNDPNLNLAVAGLLSQQHQQDTHQQQQQQQQQQHMLATYNNWAYDLSLHQQHRDFAEKANNELVALQQQQQEQQQEQQQHHILLSAHLTQPQHYLQSQQQQQQQHQQQQHHYEHPSDTISNASSSSNTASNNELSNNMRNNFALYTTYGGQQQQQQQQHHSSNATPTSIDEVIQDTLKDECMDDHHSGVSYLTLSSVTDLQALKESYEQQQQQQQQQQQQQQQHHLQLTHEQQLQHHNHLHQQHSLLHHHHQHPHHSQTHSNQSASSDAGDSPASPTTIGGGGGGGVGHGAEVIGTPLQSFTQLTNATTHRDLYGNLTPEHTPLAYYPSPLSPVLSSSSVYAGPLLTSAAGDMQYGMQSASSPAHQHTAIAANTAATAAAVAAATAAVSGQNSGSGSISPAALVDEYGSPKSQNGSGGGGGGTLPAFQRIVASNYGGIGVAGVSSASVGGAERYTSLTNYRTHNDGCWPAAHYEAISYAPSPVVSNNNNNNNNNSGTQSHSNNNLSSTNVIRSLNGRAVTDGGNGAVTAVGLAAAAAASAHLSASASLSAMAAESSADFYKSYNPFSAPSRTVVTASTEEHVSRSSSRRLSASRRGDLSCSNCTTKTTSLWRRNPNGEPVCNACGLYFKLHHVNRPLTMKKETIQTRKRKPRGGKAEKSNKNSKNHSSAGQNNSNSNNNNNNNNNSSNNHNSASLLLPDSKIDRPVCQLLAQLKSSVSFPRDLASVSRSLFKVLRVLRLAGWSWVSGTELKELTNNLQKQQQQQQQQQQSKQKHQQLQQNSSLTQSAASSPTNSIPSPTPLLSSTLIADPTVPSSPLLLQQHQQQQHQQQQQQQQQQQQRAHRHHSNLSGDGSSPLQDFQPLSPMHYGSPLMLSSDSPTHNHHQHHHHHHQLISNNNNNNNNNGTNGSNNNSNNSINNNNNNNTNTSYHHNNNNNNNNNNDNSGNNNNNNNNIKFMQKYLQTHQQQQQHHHQEQQQQQQQQQQQALALQLIQLMPSPTSPTTLITNTLTTTATTTTMPGSHLQQHQLQQQHPLLQHGQQHTILSSCSPDQSPTYSSYNELGVMGVEGVEGVDPTISIKVEQLQQQQQHQQHQQHLHQRQQHLLQQHTVSMSRSPSLEDDYDHHYHQQQQQQQQQQQQQHVFQLHAVAQQHLQEFERKFDRETVVKME

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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