Cqua006704.1
Basic Information
- Insect
- Conops quadrifasciatus
- Gene Symbol
- -
- Assembly
- GCA_949752815.1
- Location
- OX457078.1:10289698-10296693[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.27 28 6.0 1.8 1 23 1626 1649 1626 1649 0.94 2 13 0.67 70 4.7 1.0 1 23 1816 1838 1816 1838 0.95 3 13 0.00013 0.013 16.4 1.6 2 23 1841 1862 1841 1862 0.97 4 13 4e-05 0.0042 18.0 0.2 3 23 1870 1890 1868 1890 0.98 5 13 1.4e-05 0.0015 19.4 4.8 2 23 1897 1918 1896 1918 0.97 6 13 6.2 6.4e+02 1.7 0.4 5 23 1931 1949 1929 1949 0.96 7 13 6.6 6.9e+02 1.6 6.2 3 23 1956 1977 1954 1977 0.90 8 13 0.016 1.7 9.8 0.1 2 23 1988 2008 1987 2008 0.96 9 13 7.7e-05 0.008 17.1 1.0 1 19 2014 2032 2014 2036 0.95 10 13 1.3e-05 0.0014 19.6 0.9 1 23 2044 2066 2044 2066 0.98 11 13 0.00017 0.018 16.0 7.4 1 23 2072 2094 2072 2095 0.96 12 13 0.0011 0.11 13.5 6.5 1 23 2100 2122 2100 2122 0.98 13 13 0.0019 0.2 12.7 6.0 1 23 2128 2150 2128 2151 0.96
Sequence Information
- Coding Sequence
- atGGTGGAGAAAATGCAGTGTCCCGTGTGCACATTATTCCTGCACGCGGGCATGGACTTGTCCGATCACTTGGAGACGCATCCAAAGGAGCAGGTCATCCGAGCACTTGTAGAGCTGACTCTGCCTCGTGCGGAAACTAAAGAGCCGGCTGGCCATGAAGATCCCGACACtaaaatggaagaaaataaagtcGATGTAGAGCCGATCATTCCCAAGATAGCTTCTAAATTGGAGAAGGACTTGGAGTTATGCATTAACTCGAGCAATGATTCCATATCTTCAACATCCTTTGCATCGTCAAGCTTTCCACGAACCTTGAATTTATCTAGTGGtgggcagcaacagcagccgccgccgccgccgccgcagaAGTCAGCAGCACCTCCGTTAACTTCCCCTGGTTTTACAAACGCTTCATTAGCAGGAAAACATGCAGCTTTTAATTCTCAGAATATCACTTTCTCGCCATCTTATCAGAGAAATATTGGGCCAGTTGATTTGGTCGataatggtggtggtggtggcgcgACTGACATGAAAAGTACTGCGGCTGCTGTCAACGAGCTCCCTCAAATATCTACTGATTTCAGCAATTTCTCAAATCGCTAccagcagcatcatcagcacCAGCAACCGGTGGCTCAACCTGCCaatcagcaacagcagaaacTGGAGGGACATACGAAGCTACAGCCCTCGTCGCTGGCTCCGTCAGAACTAGCGGGTCATCTAGTTGGGCAGTTCAGCTCTGCAGCACCTCCAAATGCCTTCCATTCTAAGCAGCAATTGCAGTTTCCTCCGCCTCTGCACGtccatcagcatcagcatcagtcGCAGCACCGCCTGCCGCCGCATCCATTGTCTCTaccccaacaacaaaatctgaAAGTCATTTATTCGCCTGCATTGCCACCGCCCGCAATACCGCCCGCGTCCCAAATACAGGTACAGCTTTTCAACTACCAAGTTCCACCGCAGCCACCGCATCAGAAGCCGCCGCCTGCTTATGGTACCGCCATTAGTCAAATACGATCTCAACACAATCAAGGTAAAAAAGGcagtcagcagcagcaattgcAGCCACATACGCAGCGCAACGCAGTTGCGTCAACTTCAAAACAACTCCATGCAAAGAAGAACGCAACGTCTAACGGCAACGGTGTATTCCCCGTAAAAGTCTCCCAAAAGAAGCAACACCTCCACCATCCTCAGCAACAAAGTGAGACTGCACCATTGCATCAGCAACAATTTGCCAAAAATGTTCTTTCTAATTCAGCTGCTGCGTCTTCGTTACGAAAACCTGGTACATATCAACAATGTGGTGATGACGCCACTGCGCCACCAACAACGCCTGCGTCATCTTCGGCCCCTGAAATGCCAACGTCGTCGACAGCTGTTGTCCCGCAACCGCCACTACCAGCGCAGCCGTCGTCGCTGCACACGCGCCCTGCTGCGCACTCGCCCTATCCCGCTATTCTGAATGTTTCGTCTTCCTCCTGCTCGTCTGTTCTACGATATGCCGAGTCGCCAGTTACTGCTCATTATCTGGAGCGTGACAATGGCGACTTTATCGTTCAAGAGACACCAAAGCGCATTGTGGAGTGTGTGGAGAAAGATAACGGCGAGTTCTCGGTGATCGAGCGCATCTATCAATCGCCTCCGAGTGTTCTGCGCAtacacgacgacgacgacgacgacgacgaggatGATGAGGGTAACGAAGAGTTAGAAGtaggtggcggtggtggtggtgacgTGACCGGTAAAGAGACCGCCGCTAAGACCGAGAAGAATAAGCAGCTTGAGGCCAACAAAAAGAACGGCAACGACAAACTAACACATGAAACGGAAGAAGACTTTATGAGCGTCGATGGCGACAGCGAAATGGATGAGTCAACTTGTGAAAAACCGATAAGCGCTGAAGGTAAAGAAAGAACCACGAACAGCAGCCACGCGGTCGGCTGCGTAGAGAAGCCGACCACaagtgctgccgctgctgctgctgcagcgaCGGCGGCAGCCAACGAAAACACCGGCACAAATGCATGGAGGAAGTCCTCGAAGAACACCATAACCGTTTTGAGCGACGTACAATTGAATCTGAATGAATACCTCGATCTGGTTGGAAACATTATAGCATCGAGCAAAATACCCAAGAGTCAAACCTTCGGTGCGGCGGCACCTATGCCACTAGTTAAAGTGGAAAAGGTTGAACCCATCGATGAGTACGAAGAAGTTGTCGACCAGTGTCAGCAGGATACACAGCTAGATGAGAAACTGATCGTGAAGAACACGGCTCAGAATGTTGACGATAGAaagacagcaacagcagcagcagcaacgacatgTTTACGAGAACCACCAAATTTAACCACcttcaaaaacaaagaaaatacttCTGAGACTGATGAATTAGTTGCAAGTAATTTTAGCGATAAGgcaagagaagaagaagaaagcatAGACGATGAGAAGCTTGGTAAACAGAACGCAGCCAACGCTTCATTCTCCAGTCATGCCACCACAAGTGTTATACGCATGGCAACAACCACGACTAGTCAGCAAAACTTGCCGGAAGCCATGGAACAAGAGCACCAGCACCATCAGGCTGCAGAAGACACATCTATGAAGAATAGACAGGCAGAGAATGTAGACATAATGAAGGCTTCTGATCGCTTGCGGCAGGTTTCGCTTAACAACAACCCCAATGCTGCTGCCGAAGATCTGTCGCCCTACGCGCAAATAAAATGCGAGGTGCTCAGCTCAACTGAAGCTGCCCGAGTGCCCTCACTGCCAGCGCCTTCGAGAAAAGGTCCTAAGAAGCTTGTTATAAAGCCTAAATCCGGTTCGGCGGCTGAAGCTAAAACCAGCTCGAAAATAAGCTGCGATCCTTTGTGTGCGGAGCAACCGACTACTCTGGCAAAGGCGAAAAAACTGGAGTGCGAGCGAGATCAACAATTGGTCAAGCATAGTTCAGCGCCAAAGAATGTCGTCGTCATCAAAAGTGAGCCCAATACTTGCAACGAAGGGCCAGCTGCAAGTACCCAAGAACCGCACTCAAAAATATCGTGTGCCCTTCATGCGTTCGAGCTTAAGCAGGAGAAGTCGTCATCGCGAGAGGAGGCGGGTCATGCTAACGACTTCAAGCAGGACGACGCACTTCATCTGGATATCAAAAATGAACGAGAAGAACTtaacaaccacagcaacaacaacaacaacaacaacaacgtgtcAAAACTAAGCCTTGAATGTGGCGAAGATCAGCTTGCGCGCTCCGCTCCACTGCGCGCCTTCGATGAGAATGCGCGCGTTTTGTTGGACTTTCCTAGTTCGAGCAGGAGCGAAATGGTGGGGGCGGCCACCTCAAACGCGCATACATTTCCTTCGGCCAACTCAATTTTCGGTGTTGCGTCGTCGTCGGCCGAAAAATCCATACTCAGCCACAATTCCACTTCCAATTCAAAGctgtcgccgtcgccgtcgttaATCACGGCCACCTCCGCCGCTTCTGGAAATGCTTTAGCTACCTTGCGCTGCGAAGACGAATTTATTGTGCCCGACGCCACCGATGCTGTGCAGGAAATTGTCATATCATCGTGTTACTCTTCTCAGTCGGCCTCGGATGTAGCGCTGCATAATTTCGGAGACACacacaaccaccaccaccagcagccgcatcagcagcagcacaatTTCTCCGACTATCCCTTTAGCTTCTTGtatggtggcggcggcggcggcagttTAGCCACCGAAATCGTTGCGAAGAGCAGCTTTGCCCAAATCtatcagcagcagccacaCGACGCTACCACCGCCGCTACTCTCGCGTCGGGCAGCAACTCGACAATAGAGGAATACACTTCGGATCCGGGGCAAGGCGAGCACACGCTCGGCGCTCCTTACAACCACCCCAACGATGCGCCGCCAGCGCCTAGGCCGTGGTATCAGTCAGTGTCCACTTCAAACGCTGACTACGAGGCTGCTTTGGCCGTCGATTGCGGCGTTTTGGAAGGTGGTGATGCAGACGACGCCGGCAGTTATTTGGATCTGGACTCCTACAAACGTGTCAATATGACTGGTGGGCGGGGAGCACCGACGATTGTGGCGGCGCCGTCTTCGTCCTTGTCGTCGTTTACGGCGGCCACCGAAAGCAGTCTGGCCGGCTGCACCACGGACGCGCTGAACATACGGACGGACGAGAAGATGCCGGCGAAGGGCGAGATCTCGGAGCAGGAAAGCAATTGTGACATTGAGAACTCCTGGAGTCAGTCTATATATGGCGATATACCGGTGCGCTTCTTTAAATCGTCATTCCCGGGACTGTTGCCGCCGGAAAACTGCTGGAATCATGAGGAGTATTTCACGGTGCAGGACTTGAGCGCTTCAGCAGGAACAACGAACATTAGTAACAGAGCAACGAAGAGCTTTGATTTTCGTCTTCCATTGCAAGACGTTGCAGCAACCacatcgtcgtcgtcagcaGTAGCACCAGCCACAGCGAGTACAGCTGGTTGCAGTTCATCGCAGCAGCATGCCGATAACTTACCATCCACGTCATccaaaaagaaacgaaaacgtGAATCAAATGCACCAAAGAACGCCCCAGGCGCGGGAACGGCAGCAGCTGCGGCTGCGGCAGCATCAACATCCACATCCACAGGGCGAACAATCGCTGCCACAGTGACGTCACAGGATCTGCTTTTGcaacaagagcaacagcaCCAACTGCACCAAGTGTATCAGGAGGTGCCTACAACATCTGCAGCCATTCAAGCCAGTCTGACgactgccgctgctgctgcatccAGTTCCGGAGCGGCTTCAGCGCTGGACACTGCAACAGCCGCTCAAAGCCGTAGCGGCAAGGTGTTCTCTTGTGTTCATTGCTTCGCTAAATTTTCCAGGCTGCGAGATCGCAACCTGCACATGATAGCGCAACACAACTACGTTCTGCGCAACTACAGACTCGTTCCGGTGCAGAAAGTGGTGGCGGTTCCAGCGACGGCAATGGCAATGGCGAAATCCACCTTTGCGCCTACTACAATAGCCGATGTGGAGGTGGCTTCGAGCCGCGCTCCCAGAGGACAACAGCTCTCGGAGGAGCTGGAGGAAGATTCGAAGCGAGACATTTCTTACGATATTGTCAAACTCGAAGTGGAACCGACGGAGCAATCTGCTGTGAGCAGACTCGCGTCCACCGAAGTGGACACTGTGGGCGAGATGCTGACCAAGTCCGAACTCGATGACAAGGATGCTTTGTCGGCTTTGGCCACTGAGGGCGTCGCTACTGGCGGCGAAAACTCTACCGACCCGGTGTTTCTACCTTCCCTCACGCGGCTCTACAACTTGTACCACATGCTGATCTCATTCAATATTGCTGCGCTCAAGCAGAATCAAACTCTCTCCGAGGAGGACGAGAAGCTAATGCTCTCTTCGATCTTCTTCTGTTTCATCTGCCGCCAGAAGTTCGGCACCGTCAAATTGTACGACGCTCACATGACCGAACACCCGGCGGAGTGCTACACGTGCGGCAAGAAATTCCAACGCTGGCAGAACTTGTCCTTGCATTTAAAACGCCATCTCGGCTGGAAGGAGTTCGGCTGCAATATTTGCGAGAAGAAATTTGTGGTGCGCAGTGCTTTGGTGGAACACATGCGCATGCATACCGGCCAGAAGCCGCTTAAGTGCAATATCTGTGACAAACATTTTAAGCGCTTCTCAAATCTCGCTCAGCACCGAAAACGTCACGGCAAGCAAATCATTCGCAAGAAGGAGTTCGTCTGCCACTGCGGTGAGGTTCTACCCTCAAAAGCGCGCTTCCTTTGGCACAAGGAGACGCACGACGCGAAGCCTAAATGCTGCCAATACTGCTGCGACCGCTTCGTGCATGCGAACTCCTTGCGCCGCCACATACGGCTGGCCCACTCCGATAAATTCGACTACACCGAGCCGATGGAGTGCCCCATGTGTAAGCAGGTCTTCGCCAAATCATCGATACGTGCACACATGGCCACGCATTCCATGGACATGCAGCATGTCTGTTCGATTTGCAGCAAGTCCTTCTCGACCAAGTGGAATCTGAAGATACACTCCTGGGTGCACGCCAACCGCACCGCGAAGCCCTTCAAATGCGAACACTGCCCCAAGGCATTCGTGCGTGAAGTGGACTTCAAGAACCACATCAacgcacacaaacaaatcaaGCCGTATACTTGCGAATACTGCGGCTGCAAATTCATTCGCAAATACAACTACTTGCGTCATCGCCGCGAACATCACGGCAACAAGAAATTCACCTGCGACCTGTGCAAGAAGTCCTTTCACCGGCATTACTATCTGATCGAGCATCGACGCATACACACCGGCGAACGGCCGTTCCAGTGCACCATTTGCGGGAAGAGCTCAACAACGAAGACCAATCACAACAAACACCTAAAAATACATCATTCACGTGATCCGTTTACTGTGGAAGCTTAA
- Protein Sequence
- MVEKMQCPVCTLFLHAGMDLSDHLETHPKEQVIRALVELTLPRAETKEPAGHEDPDTKMEENKVDVEPIIPKIASKLEKDLELCINSSNDSISSTSFASSSFPRTLNLSSGGQQQQPPPPPPQKSAAPPLTSPGFTNASLAGKHAAFNSQNITFSPSYQRNIGPVDLVDNGGGGGATDMKSTAAAVNELPQISTDFSNFSNRYQQHHQHQQPVAQPANQQQQKLEGHTKLQPSSLAPSELAGHLVGQFSSAAPPNAFHSKQQLQFPPPLHVHQHQHQSQHRLPPHPLSLPQQQNLKVIYSPALPPPAIPPASQIQVQLFNYQVPPQPPHQKPPPAYGTAISQIRSQHNQGKKGSQQQQLQPHTQRNAVASTSKQLHAKKNATSNGNGVFPVKVSQKKQHLHHPQQQSETAPLHQQQFAKNVLSNSAAASSLRKPGTYQQCGDDATAPPTTPASSSAPEMPTSSTAVVPQPPLPAQPSSLHTRPAAHSPYPAILNVSSSSCSSVLRYAESPVTAHYLERDNGDFIVQETPKRIVECVEKDNGEFSVIERIYQSPPSVLRIHDDDDDDDEDDEGNEELEVGGGGGGDVTGKETAAKTEKNKQLEANKKNGNDKLTHETEEDFMSVDGDSEMDESTCEKPISAEGKERTTNSSHAVGCVEKPTTSAAAAAAAATAAANENTGTNAWRKSSKNTITVLSDVQLNLNEYLDLVGNIIASSKIPKSQTFGAAAPMPLVKVEKVEPIDEYEEVVDQCQQDTQLDEKLIVKNTAQNVDDRKTATAAAATTCLREPPNLTTFKNKENTSETDELVASNFSDKAREEEESIDDEKLGKQNAANASFSSHATTSVIRMATTTTSQQNLPEAMEQEHQHHQAAEDTSMKNRQAENVDIMKASDRLRQVSLNNNPNAAAEDLSPYAQIKCEVLSSTEAARVPSLPAPSRKGPKKLVIKPKSGSAAEAKTSSKISCDPLCAEQPTTLAKAKKLECERDQQLVKHSSAPKNVVVIKSEPNTCNEGPAASTQEPHSKISCALHAFELKQEKSSSREEAGHANDFKQDDALHLDIKNEREELNNHSNNNNNNNNVSKLSLECGEDQLARSAPLRAFDENARVLLDFPSSSRSEMVGAATSNAHTFPSANSIFGVASSSAEKSILSHNSTSNSKLSPSPSLITATSAASGNALATLRCEDEFIVPDATDAVQEIVISSCYSSQSASDVALHNFGDTHNHHHQQPHQQQHNFSDYPFSFLYGGGGGGSLATEIVAKSSFAQIYQQQPHDATTAATLASGSNSTIEEYTSDPGQGEHTLGAPYNHPNDAPPAPRPWYQSVSTSNADYEAALAVDCGVLEGGDADDAGSYLDLDSYKRVNMTGGRGAPTIVAAPSSSLSSFTAATESSLAGCTTDALNIRTDEKMPAKGEISEQESNCDIENSWSQSIYGDIPVRFFKSSFPGLLPPENCWNHEEYFTVQDLSASAGTTNISNRATKSFDFRLPLQDVAATTSSSSAVAPATASTAGCSSSQQHADNLPSTSSKKKRKRESNAPKNAPGAGTAAAAAAAASTSTSTGRTIAATVTSQDLLLQQEQQHQLHQVYQEVPTTSAAIQASLTTAAAAASSSGAASALDTATAAQSRSGKVFSCVHCFAKFSRLRDRNLHMIAQHNYVLRNYRLVPVQKVVAVPATAMAMAKSTFAPTTIADVEVASSRAPRGQQLSEELEEDSKRDISYDIVKLEVEPTEQSAVSRLASTEVDTVGEMLTKSELDDKDALSALATEGVATGGENSTDPVFLPSLTRLYNLYHMLISFNIAALKQNQTLSEEDEKLMLSSIFFCFICRQKFGTVKLYDAHMTEHPAECYTCGKKFQRWQNLSLHLKRHLGWKEFGCNICEKKFVVRSALVEHMRMHTGQKPLKCNICDKHFKRFSNLAQHRKRHGKQIIRKKEFVCHCGEVLPSKARFLWHKETHDAKPKCCQYCCDRFVHANSLRRHIRLAHSDKFDYTEPMECPMCKQVFAKSSIRAHMATHSMDMQHVCSICSKSFSTKWNLKIHSWVHANRTAKPFKCEHCPKAFVREVDFKNHINAHKQIKPYTCEYCGCKFIRKYNYLRHRREHHGNKKFTCDLCKKSFHRHYYLIEHRRIHTGERPFQCTICGKSSTTKTNHNKHLKIHHSRDPFTVEA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -