Basic Information

Insect: Conops quadrifasciatus
Gene Symbol: -
Assembly: GCA_949752815.1
Location: OX457079.1:29612157-29614070[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.0017 0.18 12.9 1.2 1 23 279 301 279 301 0.99

2 9 0.00095 0.099 13.7 1.8 1 23 307 331 307 331 0.90

3 9 1.2e-05 0.0013 19.6 1.8 1 23 338 363 338 363 0.98

4 9 5.7e-05 0.006 17.5 0.7 1 23 372 394 372 394 0.97

5 9 2.7e-05 0.0028 18.6 1.5 1 23 402 426 402 426 0.97

6 9 0.00033 0.034 15.2 0.5 1 23 432 454 432 454 0.98

7 9 0.0024 0.25 12.4 2.0 2 23 461 483 460 483 0.96

8 9 0.012 1.2 10.3 1.2 1 23 489 511 489 511 0.97

9 9 1.9e-06 0.0002 22.2 0.4 2 23 518 539 518 539 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.0017	0.18	12.9	1.2	1	23	279	301	279	301	0.99
2	9	0.00095	0.099	13.7	1.8	1	23	307	331	307	331	0.90
3	9	1.2e-05	0.0013	19.6	1.8	1	23	338	363	338	363	0.98
4	9	5.7e-05	0.006	17.5	0.7	1	23	372	394	372	394	0.97
5	9	2.7e-05	0.0028	18.6	1.5	1	23	402	426	402	426	0.97
6	9	0.00033	0.034	15.2	0.5	1	23	432	454	432	454	0.98
7	9	0.0024	0.25	12.4	2.0	2	23	461	483	460	483	0.96
8	9	0.012	1.2	10.3	1.2	1	23	489	511	489	511	0.97
9	9	1.9e-06	0.0002	22.2	0.4	2	23	518	539	518	539	0.97

Sequence Information

Coding Sequence: ATGGagagaattttatataaaaataaagaagtaCTTTGCCGCGCTTGCTTGGAGTTGCTCGACAACTGTACGAAACATGATATATTCCTAACACCCGGCTTGGCCAACAAGTTAACCCTGTGCACCTCTTTGTCTGTAGAGCTGATGGACAGATTACCAAGGTATATTTGCGACAGCTGCTACAAAAAGTTGGAAGAATTTCAGCAGTTCCGAGCGATGTGCGTGGATTCAGTAGAGCAGTTCCATGAGATCCTGGAGcgtcaacaaaaacaatttgcatTCGAAGAGGAAGAGGATTTTGATTTgcaagaagaaaatgaaatacagATAACCATTGCAGAATCGGAAATATTGCTTAACCGCCGCAAACGCATTAGTTCGAAAGAGGTGATGGATGAGAACACTGACGAGACAGCACGGTCTTTACGTAGGACCAAACGGGCCACTACGAAAATGAATACACTTAAAAACCTAGGAACTGAGGCAGAAAAAGCAGGGCCGCAAAGGCgctgcagaagaagaaaaagcaaaagaactATTAAGTCTCCTTCTAAAAGTAATGATGAAATTGCATTTTCCGAGAATAAGCAAGAAACAATAATCGCATCCACCCGTGTTGTCGGTAGCATCATAGAGGAGCCTCATGTGTCACCGTTCGGAGATCATATGAATGATTTATCGGACGATggagaaaaaaatgtatactaCAACAAATTGGCAGAGAGTAAGGAAGACGATAGCGCAAGACCACAACCTGGATTAAATAACCAGACGTATTGCAAACGCAAATTTAGCAATTTAAATTCgagaaaaacaataatgaaGTCACAAACATATCAATGTGATATTTGCCCTATGCGGTTTTTTGTCGAACATCGTCTGGTCGCACATAAACGTAGTCATGATGGTCTCATGCCATATGCTTGCAGCTTTGAAGCATGTGGCAAGGGCTTCAATCGCTGGCATTGTTTGAATGAGCATCTCAAGGCACATCAGGGTACCAACCTGCGGTACACATGCAGTGAGGAAGGTTGCGGAAAAGTATATAAGCACAAGCCTACACTCTCAATGCACATGCGGAAGTTTCACAAGAAAGGACCGGAACTTAAATCACATGTTTGCGAGATTTGCGGCAAAGTTTTCAAATCCTCTGCAATTCTCAACGACCATCGTTACACACACAAGGACAAATCGGAACTTCCTTATCCATGTACTGAAACTAATTGTGATCGTCGTTTCTCCAGCAAAGAGAAGTTGAAGGTACATCGAATGCGTCACGCAGGAATCAAAAACTACGTGTGCCCTTATTGTGGAATGCGGAAAACCACGCGCAACGAGCTGAAAATTCACATAAATTATCACACACTGGAGCGAACATGGCCGTGTCGTTTTTGCCAACATGTCTGCAATAGTGCCGGCAATCTGAAAATGCACGTGCGCACAGTGCACGAACGGGCGAAAGACTATGCCTGTCGCTTCTGTGAACGCACATTTGCCAAGCCCGATACGCGCAAATATCACGAAATGACGCACACTGGCGAGAAACCCAACGAGTGCAAAGAGTGCGGGAAACGTTTTACCCAACCTGCGGCTTTGCGCACACATAGTAAAATACACCGTAGGCACCAAAAAGGGGCATTGACAGATGGAGAGGTAAACGTTCTGATTAGTAACGAGAACGATGCAGAATTGAAAAACTCTGTTAGTGATTCTTCATCAGTGTCCACACTTCTGCAGACGGGGCCAGATAAGTTGCTGGGCCATTCCATCGGATTGAACCACCTTCCTGGATTCAGTGTACAAAACTCACTACGCAGCGCAAGCACGGAGGCAGCAAATTGTTAG
Protein Sequence: MERILYKNKEVLCRACLELLDNCTKHDIFLTPGLANKLTLCTSLSVELMDRLPRYICDSCYKKLEEFQQFRAMCVDSVEQFHEILERQQKQFAFEEEEDFDLQEENEIQITIAESEILLNRRKRISSKEVMDENTDETARSLRRTKRATTKMNTLKNLGTEAEKAGPQRRCRRRKSKRTIKSPSKSNDEIAFSENKQETIIASTRVVGSIIEEPHVSPFGDHMNDLSDDGEKNVYYNKLAESKEDDSARPQPGLNNQTYCKRKFSNLNSRKTIMKSQTYQCDICPMRFFVEHRLVAHKRSHDGLMPYACSFEACGKGFNRWHCLNEHLKAHQGTNLRYTCSEEGCGKVYKHKPTLSMHMRKFHKKGPELKSHVCEICGKVFKSSAILNDHRYTHKDKSELPYPCTETNCDRRFSSKEKLKVHRMRHAGIKNYVCPYCGMRKTTRNELKIHINYHTLERTWPCRFCQHVCNSAGNLKMHVRTVHERAKDYACRFCERTFAKPDTRKYHEMTHTGEKPNECKECGKRFTQPAALRTHSKIHRRHQKGALTDGEVNVLISNENDAELKNSVSDSSSVSTLLQTGPDKLLGHSIGLNHLPGFSVQNSLRSASTEAANC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -