Cqua010290.1
Basic Information
- Insect
- Conops quadrifasciatus
- Gene Symbol
- zfh1
- Assembly
- GCA_949752815.1
- Location
- OX457078.1:40780826-40785212[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 0.00015 0.016 16.2 1.3 1 23 199 221 199 221 0.95 2 15 0.0014 0.14 13.2 2.3 3 23 229 249 227 249 0.95 3 15 0.00017 0.018 16.0 0.1 1 23 398 420 398 420 0.98 4 15 0.001 0.1 13.6 3.0 1 23 426 448 426 448 0.98 5 15 5.8e-05 0.0061 17.5 4.3 1 23 478 500 478 500 0.97 6 15 0.0089 0.92 10.6 0.3 1 23 511 533 511 533 0.94 7 15 0.0039 0.4 11.8 0.3 1 23 539 562 539 562 0.97 8 15 0.28 29 5.9 0.4 5 19 573 587 570 588 0.91 9 15 0.00038 0.039 15.0 6.8 1 23 597 619 597 619 0.97 10 15 0.16 17 6.7 0.3 2 23 625 646 624 646 0.96 11 15 9.8e-06 0.001 19.9 0.3 1 23 655 677 655 677 0.98 12 15 0.0011 0.12 13.5 0.1 3 23 685 705 683 705 0.97 13 15 6e-05 0.0062 17.5 0.5 1 23 711 733 711 734 0.95 14 15 0.043 4.5 8.5 0.1 1 23 744 766 744 766 0.96 15 15 0.013 1.3 10.1 0.0 1 20 1339 1358 1339 1361 0.93
Sequence Information
- Coding Sequence
- ATGGATGCTCAATCCTACGGTATACAATGGATACGGCATACAGCCGCTGATATGAAGACGGCACGAGAGCTCATTATTTCCGAACAACCGCCGGAGGATGAACACGATTTAATTAATAACGACAATGCAGGCCAGCATCATCATTCTGATTATCTGGTGGACCAGGTGAGCACCGAAGAGGACATTGATCAGATTGCTGCAGAGAATCTGATATTTATGGCACATGATGGGCAAATGGTAGCCGAATTCATCAGTGCCACAGGTGGTGCAAACAGAACTGTTGTGGTGGCTGCTAGCGATGGTACGCCCATCGATTGCGCTCTCCTGAGACAATCCAGAAGAGAAGACTGCAGTGGTGGCATGGAAGAACAAGGCATTCAGACAAATGGAAGCGATCTAATGGCCTTTAATGAGGAGTATGGTGAAACTCAGATGGTTACCGAAGAAGTTATTACCGACGATTGGGTTCAACCGCAAGGAGAGGAGAGAGTTGAAATTCCGGCGGAGCAAATAATTTGCTCGAACTCGCTCGCGCCTTTAGATAATGAAGTTCCGCTACCTACGGTGCAGGATGAATACACGGCCCTACGCCCGTATCCGTGCGATTTCTGCAGTCGTCGTTTTCGCAAAAAGACGAGCCTTATGAATCATATGGTGGCGCATCAAAATGACCGTCCGCATCTGTGCAAGCTGTGCGGTTCGCGTTTCTTTCGACGGTCCGATCTGATTAATCACCTGAAGGCACATGCTGAAATGCCCGACCCGGAATTTGATGATGTCGAGTTTATGACTTTTGTGCAACATGAAACCATTGAGCAACAGCAGAAACAGTCAAACGATAATTTTTACGACCAAGATTGGAACCGTCAAGCAAACCCCAGTCGAATGGCCATGAAATCAACGCGCAAAACACATTCTGCGATTGTTAGTGAAAACAGCAGTTCCTCCTACACGCAACGCGGGCGCATAAGTCGAATCAAGCCCAAGGAGGAGAACAACTATACCATCGACGAGACATTACACGGAAGTCATCGGAGCGGTGGCGCAGTTCATAGTGCTCAGTTGGAGCGATATGAAGATTGTCCAGGGTTGCAAACGTCCACGGCCGTTGCAAACCTTGTGCAGGATAATGCCGACGCGCATGTCTCTGGCGATAAGGAACAATTTCCCGTCTTAGACGAAAGCAAGCCCTTCGTTTGCCAGCAGTGCGGACTGGCATTTGCTCGTGAGAAAGCGTTGATGTCACATGTCAAGAATCATCGCACTGATTCTCCCCACGAATGTAGTCATTGCAATGAGATGTTTTGGGACTCATCTAGTTTGCAGGATCACCTCAAATCCCACCAGTTTGAGGACAGTAATTCGGAATACGAGCCTGCCGAGGCTGATGAGGTACAAAGCGACTCCGAGTCGGAGTACTTGTACGGAGAGTTTTATTGCCACGTGTGCGGCATGTCCTTCCATAGGCAAGACCTGCTCAATAGACACGCGAAGCAACACGTTAAGCATGAGGAGGATTTGAAGGACCGTCACTGTTGCAATACGTGTGGTGAGACATTTGCTGAAGCGCTGGATTTGTTGGCACACGCTGAGATACATGCACGCTATCCTCCTTTCAAGTGTGTCCTCTGCGGTGAATCGTTCTTCGAGGAAGCTACCATCAAACGCCACCTCAACAGTATGCATTCTAATGAAATGACTGTAAATTCCTGCATTCTCTGCGGTAAAGAGTGTCGCGATCGCAAGGCGCTAATGAAGCACGCGTGGGATCATTCGCGCGAAAAGTGCCACTCTTGCTCCAAATGTGGTAAAAACTTCCACAATAAGGCACGCCTCAAACGTCACATGACTTCGCATCGCGACAAGTCGGTTGTTTGCGACGTTTGCCAGGCAGAGTTTCCCGACGGACGTACTTTATCGAATCACCGGCACTCGCATAGTGCCACCGCCTCAGGCAAGCTCTTCCCTTGCAACGAGTGCGGCAAGACCTTCGGTTCGCGTAGCTCCCAACAAATACACGTGCGCATACACACAGGCGAGCGCCCTTACGGCTGCCGCTACTGCTGGAAAGCGTTTGCTGATGGCGGCACCTTGCGCAAACACGAACGCATCCACACCGGGGAGAAGCCGTATGCCTGTTCCGTGTGCCCGAGGGCCTTCAACCAACGCGTCGTTTTGCGTGAACACATCCGTTCTCATCACTCTGCACTGGACAACAAACGTGGAACGTACTTTTGCAAGGTTTGCAGCGCTGAGTTAGCCACTTCTGGCGATCTGATACAGCACCTCATACAGCACAGCGACAAGAATACCGCCATCCAGCGCCAGCCCATTACCGGCCCACGGAAATACAAGAGGCGGCGTAAATTGAAACCCCATGAAATTGCTCAACTTCGTAACGAGAACTCAACTAACGGCAAAGACGAGCTTGGTGCAGCTGGCAGCGACATCGATATCTCCGACTTTGATATTGAGAACGTGGATGACTTACTGGGTATCACAGAAACTGGATCCGGCTCTTCCAGCGCTAATATTAGGAAGcataacaaaagaaatacttCTGCGGACGAGCATGGGACAGTCGCAAGCACCACCCTCGGACAGGAGCAGCTTGTCTCTCCGCCCACAGATGCAGAAGGGGTGTTGACCAACTACGAAAAGGAGCACTACAGCTCGTCCGGTAACTCAGGAAGCAAGTTAAATAGTTGGCAAACTAAGCTCATCACCTCGAACTCAAATGACGAAAGCTACAAGTCGTTGCTGTCTAATTTAGAGAACACGTTGCAGAGTATCGATACATTGGTGGTTGGCGTCAGCAACACCGGGAAACTGAACGAGAACAGGGTTCAGCAAAATACAAAAGCCACGCCTCTTACGGGCTGTTTGATAAAGGAACAGTTAACTCTGGTCCGGACTCAGCCGGCCGTTAGCACGGCAGCCCGTGTACGAAGTGCGAATAAAAGGATGGCCCAGAGAAATGAGACATCATCACGACCGCGGATGATACACACAGAACGAACTCGTCTTCGAACCGCCAGACACCCTGAAGGTGCTAAGAGGCGCACTAAAACGCCTTCTGAACAAATCGAAGCCAGAAAAACGCAGCTACCGGCAAGTCGTCAAACTAACGGCACAAATAGCAATAACCTCGTGAATGGTTACGAAATAGCTTTGCCTGAGATGCACCAATCCAGTCAGCACGACATCCCTTCCAGTCCGATGACAGGGATTAAGGAAGAATTCATTGTTTACCAAAAGAACGATCCCGAAAACAACACCAAACACAACGACAGTAACTCGCAGAGAAATCGCAATAGTGATCTGTACGATGCACAACTATTGCTAGAAGCCACTACTCTGCGCAAGGACGTCTACGAAAAATACAACCCAGATTTAGTAAGCGATTTGGAGGAGATACTCCGCTCTCCAGACAAGTCGTCTGATAAGATCCGACAGCGTTTTACCAGCGAATCTTCATCGACGGCGAACTATTTGGTCGAGCCAACTGAAGGAGAGCAAcatttgattaaaattgaaCCGACGTCGCCTGATATACACGACATCGTTGCCGGCAGCAGCGTCGTCGTCGGAAACATCAACAGTCATAGTAGCGAGCGCCAATTAGCCAAGCGCAGTATGCGTAGGCGACCCGTGACAAATCGCAGGTATTTGGAATTCGAAACTGAGTTGACAAATCTGTCAAGTAGCCGCAGTTCTGAAAGGAACACACTTCATCACGAGCATAAATCGAGTGCAAGTAAATTTTCAAAGCCACACCTAACCGAATGCTCCAAGAATTATTTAAGCTATGCCACGCCTGATTATCGAACTGCTAATGGAGAAGAGTCTGATGGGGCTTCTTGCCCTACGGGCGGCAACGGCAAAAACGCCAGTACCTCGTTTTCGTCGATTTCTGCTGTTGTGGCGGccgcagcagcggcggcggatGATGCTGCAAAAACCTCAAATTCATCACCTTCTAAAAACTCCACCGCTAACCGCAATAGGCGTTATTATGAATGCGAAATGTGTTCGGCTGTGTTTCCTGATAGAGCTCAGCTGCTGGACCATGTTCCCATTCATATCTAA
- Protein Sequence
- MDAQSYGIQWIRHTAADMKTARELIISEQPPEDEHDLINNDNAGQHHHSDYLVDQVSTEEDIDQIAAENLIFMAHDGQMVAEFISATGGANRTVVVAASDGTPIDCALLRQSRREDCSGGMEEQGIQTNGSDLMAFNEEYGETQMVTEEVITDDWVQPQGEERVEIPAEQIICSNSLAPLDNEVPLPTVQDEYTALRPYPCDFCSRRFRKKTSLMNHMVAHQNDRPHLCKLCGSRFFRRSDLINHLKAHAEMPDPEFDDVEFMTFVQHETIEQQQKQSNDNFYDQDWNRQANPSRMAMKSTRKTHSAIVSENSSSSYTQRGRISRIKPKEENNYTIDETLHGSHRSGGAVHSAQLERYEDCPGLQTSTAVANLVQDNADAHVSGDKEQFPVLDESKPFVCQQCGLAFAREKALMSHVKNHRTDSPHECSHCNEMFWDSSSLQDHLKSHQFEDSNSEYEPAEADEVQSDSESEYLYGEFYCHVCGMSFHRQDLLNRHAKQHVKHEEDLKDRHCCNTCGETFAEALDLLAHAEIHARYPPFKCVLCGESFFEEATIKRHLNSMHSNEMTVNSCILCGKECRDRKALMKHAWDHSREKCHSCSKCGKNFHNKARLKRHMTSHRDKSVVCDVCQAEFPDGRTLSNHRHSHSATASGKLFPCNECGKTFGSRSSQQIHVRIHTGERPYGCRYCWKAFADGGTLRKHERIHTGEKPYACSVCPRAFNQRVVLREHIRSHHSALDNKRGTYFCKVCSAELATSGDLIQHLIQHSDKNTAIQRQPITGPRKYKRRRKLKPHEIAQLRNENSTNGKDELGAAGSDIDISDFDIENVDDLLGITETGSGSSSANIRKHNKRNTSADEHGTVASTTLGQEQLVSPPTDAEGVLTNYEKEHYSSSGNSGSKLNSWQTKLITSNSNDESYKSLLSNLENTLQSIDTLVVGVSNTGKLNENRVQQNTKATPLTGCLIKEQLTLVRTQPAVSTAARVRSANKRMAQRNETSSRPRMIHTERTRLRTARHPEGAKRRTKTPSEQIEARKTQLPASRQTNGTNSNNLVNGYEIALPEMHQSSQHDIPSSPMTGIKEEFIVYQKNDPENNTKHNDSNSQRNRNSDLYDAQLLLEATTLRKDVYEKYNPDLVSDLEEILRSPDKSSDKIRQRFTSESSSTANYLVEPTEGEQHLIKIEPTSPDIHDIVAGSSVVVGNINSHSSERQLAKRSMRRRPVTNRRYLEFETELTNLSSSRSSERNTLHHEHKSSASKFSKPHLTECSKNYLSYATPDYRTANGEESDGASCPTGGNGKNASTSFSSISAVVAAAAAAADDAAKTSNSSPSKNSTANRNRRYYECEMCSAVFPDRAQLLDHVPIHI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -