Basic Information

Insect: Conops quadrifasciatus
Gene Symbol: -
Assembly: GCA_949752815.1
Location: OX457080.1:23176489-23179008[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 2.4e-06 0.00025 21.8 0.3 1 23 12 34 12 34 0.97

2 15 6.3e-05 0.0066 17.4 3.6 1 19 40 58 40 63 0.95

3 15 1.2e-05 0.0012 19.7 5.3 1 23 69 92 69 92 0.97

4 15 0.045 4.6 8.4 3.2 1 23 107 130 107 130 0.93

5 15 0.00035 0.037 15.0 1.4 1 23 251 273 251 273 0.99

6 15 0.0025 0.26 12.4 4.2 1 23 279 301 279 301 0.99

7 15 0.0072 0.75 10.9 1.5 1 23 315 338 315 338 0.92

8 15 0.0038 0.4 11.8 1.8 1 20 346 365 346 367 0.93

9 15 7.3e-05 0.0076 17.2 3.8 1 23 397 419 397 419 0.98

10 15 4.4e-05 0.0046 17.9 1.5 1 23 425 447 425 447 0.98

11 15 0.17 17 6.6 7.8 1 23 453 475 453 475 0.98

12 15 7.2e-06 0.00075 20.4 4.2 3 23 551 571 550 571 0.97

13 15 8.6e-06 0.0009 20.1 2.3 1 23 577 599 577 599 0.97

14 15 4.3e-06 0.00044 21.1 0.4 1 23 606 628 606 628 0.98

15 15 0.0096 1 10.5 5.7 1 23 634 657 634 657 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	2.4e-06	0.00025	21.8	0.3	1	23	12	34	12	34	0.97
2	15	6.3e-05	0.0066	17.4	3.6	1	19	40	58	40	63	0.95
3	15	1.2e-05	0.0012	19.7	5.3	1	23	69	92	69	92	0.97
4	15	0.045	4.6	8.4	3.2	1	23	107	130	107	130	0.93
5	15	0.00035	0.037	15.0	1.4	1	23	251	273	251	273	0.99
6	15	0.0025	0.26	12.4	4.2	1	23	279	301	279	301	0.99
7	15	0.0072	0.75	10.9	1.5	1	23	315	338	315	338	0.92
8	15	0.0038	0.4	11.8	1.8	1	20	346	365	346	367	0.93
9	15	7.3e-05	0.0076	17.2	3.8	1	23	397	419	397	419	0.98
10	15	4.4e-05	0.0046	17.9	1.5	1	23	425	447	425	447	0.98
11	15	0.17	17	6.6	7.8	1	23	453	475	453	475	0.98
12	15	7.2e-06	0.00075	20.4	4.2	3	23	551	571	550	571	0.97
13	15	8.6e-06	0.0009	20.1	2.3	1	23	577	599	577	599	0.97
14	15	4.3e-06	0.00044	21.1	0.4	1	23	606	628	606	628	0.98
15	15	0.0096	1	10.5	5.7	1	23	634	657	634	657	0.92

Sequence Information

Coding Sequence: atgGATGTGGGTGTCCAAGGGTGCAATTCTAATTATATCTGCAATGTCTgcaacaaacaattttcaaaacctTCCTTATTGAAATCTCATATTGTCGTACACACTGCAGAAAAGCCCTTTCAGTGTTTGTCGTGTAATAAATGCTTTTCGCAAAAATCGTCTCTCCGTCGCCATGACCAGGAAATACACAAAGCCAAAAAGCCTCACCAATGCTCTCAATGTGGAATATGctttaCCCAAAAGGTAAATCTACGAATGCATCTAAAGCGCACGCACTCAGCAGGGAATGGTGTAGAGCTGTCTGCCACTACCCAAAGTTTTCCCTGTGATCGTTGTAGTTGCATATTCAAAAAACTTAACGCTTTAAATCGTCATAAATCTCAACAACATGTGCCTACAAAAACATTAGAGGCATTGCGTTCTGCTAAACTCGCGGTTGACTTCGCTGAAGCAACACCGGTGGATAATGCAGACGAATTAgcacaaaatgttttaatggaattaaaaaaattgcaatataGTATGTTGCCAATAGAGCAGACGTTTGAGGAAAGAGGCAGCTCCGTCGTCGAAGAattgaaatcaattaaaaatcaaaaagactTTGTAAGAGAGAATGAAAATCTCGATAAAACAATTGTTGAAGACGGCGAAGCGCAATTAACGCAATTGATTGATAGACTAAATCCAGAGTTTGAGCCGCGTTTATTAACAGTACAATGCATCAAACGTAGTGATGGTCTGAAATATTATGTTTGCGAATTTTGCGctaaagaatttagaaaaacgtaCGATATAATACGGCATCGTCGTACGCATATCCAAGAAGCACCGTATAAATGTAACTACTGTAGCACTCTCTGTATTACGAAAACTAAATTAGAAGCACATAAAAGAATGCATGCGTTATCCACAGAGGATGATACTGCAAGAAGCAATCAATATGTTTGTAacgtttgtaaaaaaatttttaactctaTACGAAAGCTGGACCACCATGCTTCGAAttcACACTGCGAAACACATTCGATGTATTATAGTTGTCTACATTGTGAGCGTTCATTTAGTACACTCGGTGCTTTTTCAGCGCATAAACATCGGCTGCAagataaagaatatcaaatgTTGTTAAATTTAGTGCCACCACCAATCCATACAAGCTCTATTAAAGGTTCTTCGAAAGAGGGCTTTAAGTGCCTTACTTGTGATCGCATGTTTTCCACAAAGACGAATCTTGACTTACATCATAAAATCCATGTAACCCATAAGAGATATCAGTGCGAGCAATGTAAGAAATCTTGCCCCAACGAAGCTCGCCTGCGCCGTCACATACTTATCCATTCTAAACAAAGAATCTATAAATGCGTCTATTGTGTGAAAATGTACAAAAGCAAGCAGCATTGTAAGCAACACATGGTCAAACATTTAGAGGCTCTTCTGACCAACAGCGGAGAAACTTCCCAAAACAAGACTCTGCGGGACAACACTAAACGATGTTTGGTGGTAGTGCAAGAAAGGGGGAAAGCAATGGGCACTATATCACTAAAGTTTGACAAATTGCAATTATTCCCCAACCGACGTGGCGGTAACAACACTATTACACAACCGAATAATCCTAGCGACGTTGCTGCTTCGGATGATAGCAATCATTGTGATTTTTGTAAGCGTTCATTTAAAAAACCCAGCGACTTAAAGCGCCATTTACGCATACACACAAAAGAACGTCCTTTCGCTTGTGACAAGTGCAACAAatcatttactttaaaatcaaCTCTAAAAGAACATAAGTTGACGCATAACGAACAGCGCAATACATTCCACTGTCAAGTATGtgacaaagcattcgcatCAAATAAGGCATTAGTAGTACACTTGCGGATCCATACTGGGGAGCGACCGTTTCACTGTCAACATTGTCCACAAACATTTCGTACATCCGGTCATCgtaaagcccacaacaaagCAGCGCATAAGTTTAAAGGTGCAAGTTATTAA
Protein Sequence: MDVGVQGCNSNYICNVCNKQFSKPSLLKSHIVVHTAEKPFQCLSCNKCFSQKSSLRRHDQEIHKAKKPHQCSQCGICFTQKVNLRMHLKRTHSAGNGVELSATTQSFPCDRCSCIFKKLNALNRHKSQQHVPTKTLEALRSAKLAVDFAEATPVDNADELAQNVLMELKKLQYSMLPIEQTFEERGSSVVEELKSIKNQKDFVRENENLDKTIVEDGEAQLTQLIDRLNPEFEPRLLTVQCIKRSDGLKYYVCEFCAKEFRKTYDIIRHRRTHIQEAPYKCNYCSTLCITKTKLEAHKRMHALSTEDDTARSNQYVCNVCKKIFNSIRKLDHHASNSHCETHSMYYSCLHCERSFSTLGAFSAHKHRLQDKEYQMLLNLVPPPIHTSSIKGSSKEGFKCLTCDRMFSTKTNLDLHHKIHVTHKRYQCEQCKKSCPNEARLRRHILIHSKQRIYKCVYCVKMYKSKQHCKQHMVKHLEALLTNSGETSQNKTLRDNTKRCLVVVQERGKAMGTISLKFDKLQLFPNRRGGNNTITQPNNPSDVAASDDSNHCDFCKRSFKKPSDLKRHLRIHTKERPFACDKCNKSFTLKSTLKEHKLTHNEQRNTFHCQVCDKAFASNKALVVHLRIHTGERPFHCQHCPQTFRTSGHRKAHNKAAHKFKGASY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -