Basic Information

Insect: Conops quadrifasciatus
Gene Symbol: -
Assembly: GCA_949752815.1
Location: OX457081.1:30372997-30377339[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.42 44 5.4 1.0 1 23 267 290 267 290 0.89

2 18 0.001 0.11 13.6 5.0 1 23 298 321 298 321 0.97

3 18 8.6e-05 0.0089 17.0 2.1 1 23 328 351 328 351 0.95

4 18 0.0029 0.31 12.1 0.1 1 23 360 383 360 383 0.92

5 18 0.00026 0.027 15.5 1.9 1 23 394 417 394 417 0.95

6 18 6.2e-05 0.0065 17.4 0.6 2 23 426 447 425 447 0.96

7 18 8.1e-05 0.0084 17.1 0.2 1 23 454 477 454 477 0.97

8 18 0.0038 0.4 11.8 8.3 1 23 483 505 483 505 0.98

9 18 1.3e-07 1.4e-05 25.8 0.2 1 21 511 531 511 532 0.97

10 18 0.06 6.2 8.0 3.8 1 23 776 799 776 799 0.96

11 18 9.5e-05 0.0099 16.8 0.4 1 23 806 829 806 829 0.97

12 18 0.059 6.2 8.0 0.8 1 23 836 861 836 861 0.94

13 18 1.3e-05 0.0013 19.6 1.1 1 23 870 893 870 893 0.98

14 18 0.0056 0.58 11.3 4.6 1 23 911 934 911 934 0.93

15 18 0.00034 0.036 15.1 0.4 1 23 940 962 940 962 0.98

16 18 0.00013 0.014 16.4 0.2 2 23 968 990 967 990 0.94

17 18 0.44 46 5.3 3.3 3 23 998 1018 996 1018 0.94

18 18 1.1e-06 0.00012 22.9 0.9 1 23 1024 1046 1024 1046 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.42	44	5.4	1.0	1	23	267	290	267	290	0.89
2	18	0.001	0.11	13.6	5.0	1	23	298	321	298	321	0.97
3	18	8.6e-05	0.0089	17.0	2.1	1	23	328	351	328	351	0.95
4	18	0.0029	0.31	12.1	0.1	1	23	360	383	360	383	0.92
5	18	0.00026	0.027	15.5	1.9	1	23	394	417	394	417	0.95
6	18	6.2e-05	0.0065	17.4	0.6	2	23	426	447	425	447	0.96
7	18	8.1e-05	0.0084	17.1	0.2	1	23	454	477	454	477	0.97
8	18	0.0038	0.4	11.8	8.3	1	23	483	505	483	505	0.98
9	18	1.3e-07	1.4e-05	25.8	0.2	1	21	511	531	511	532	0.97
10	18	0.06	6.2	8.0	3.8	1	23	776	799	776	799	0.96
11	18	9.5e-05	0.0099	16.8	0.4	1	23	806	829	806	829	0.97
12	18	0.059	6.2	8.0	0.8	1	23	836	861	836	861	0.94
13	18	1.3e-05	0.0013	19.6	1.1	1	23	870	893	870	893	0.98
14	18	0.0056	0.58	11.3	4.6	1	23	911	934	911	934	0.93
15	18	0.00034	0.036	15.1	0.4	1	23	940	962	940	962	0.98
16	18	0.00013	0.014	16.4	0.2	2	23	968	990	967	990	0.94
17	18	0.44	46	5.3	3.3	3	23	998	1018	996	1018	0.94
18	18	1.1e-06	0.00012	22.9	0.9	1	23	1024	1046	1024	1046	0.99

Sequence Information

Coding Sequence: ATGAGTTCTTTTTTAACTGGCGAGAAGGCGATACAGCATTGTCGCGCGTGCTtgataaacataaataatttggaaaatttagaTTCGGAAACATTGCCGGTAACTGTTACCCAGGATCAGCAGCTGCCACTCTTCATTGATTTGAGATCCTCGCAAGAGATTCTCCATTTATTTTGCATACTGACTGACACTAAAGAAAATCAAGAAGAAGAGATTGCAGTTcaacataaaaatgtttgtgtgGATTGCTTCAGAATTTTGGAGGAATTCGAAAAATTTCGCAAAAGGCTTTTGGAATGTGATAAAGTTTTTAAGGCTGCCCTCGTGGAGAATATCGAGGAAGATCTAGTGCAAAATGGCACAGCACAAAAAGCCACAGCAGAagtaaaattttgtgaaaatgctgagaaagaggaagaagacaaTCTTATGAGGGAAGAGATTGTGCATCATCCCGTAGAGTCTGTGTTCATTTTTGAATCAGAACCCTTCAATACAAAAGGCGTCAATAACACAGAGTTTCTTACACGGGAAACTCCTGCATTGGAATATAATAGGGCATCCTTTAACGAAGAGCAGGATACGGAGAAACATCATGGATTCATCGATGAAGAAGATGCACTTCTGCAAACGGAAAAGTCTCTTGGTTTTCAAGAAACGACAACTCTAGAAATTCCTCGAATTTCTGATACTGAAAAATCTacagaaaaattcaataataagGAACATAGCGATGTCCATCGCAATAAAGAGTGTGTCAATGAAGATGCTAATGATGAGGAATTTAATGATTATGTTTTTGAATGCAACCAGTGTAAACGGAAATTTctctataaatatatttacgaAGCTCATCTACGTGGCGCACATCAAGCGCAATTAAAACGCCCCTACAGTTGCGATCATTGTGATAAAAGATACAAGAGTGTGGATACTTTACGCTATCATCTGCACAAGGTTCACAACAGCAATGGTCAGACTTTCATTTGcacaatttgtaaaaaaatatacaaaacgGCCGCCTCGTTGAAACAACATCATCGCGATCAACACTTGGGTCAGAAACAACGAAAGACATACATTTGCGAATATTGTGGTGCTGGATTTATAGGAACCAAGAATTTGGAAAACCATTATGCAGCGAAACATGGTGAGATCTCCGGCTTTCATCCAGGTCGGTATGAGTGCAGTGTGTGTAAGAGACGCTTTAATAATGCCTTCAATCTGCAATATCACTCATTGCGCCAGCACGCGACCGACAATATGCTGCAGTGTGAATGCAGTATTTGTGGCGTCAAATTTGCCAAGAAGTTTATGCTTGTAGCTCATATGCGTGCCCATGCTAGCGTGGAGGACAAGTTCGAATGCGATCAATGCGGCCGACTTTTTACACAGAAATTCGACGTTGTTCAACATATTAGAGTGGTGCATATGAAAGTAAAACCGTACCACTGTTCACATTGCAGCCGATCATTTGGTACCGAGAAAACCTTACGTCACCACATTTATACGCATACCGGAGAGAAACCATACCAGTGCAAAATTTGTGGTAGGCCTTTTCGCCAACCCAGTGCGCTGAAAACGCATATGAAAAATTTCAGGCCGCCCTCCGAAAACAAACGAGACGTAAATCTCATCGCCATCAGCTTGACTACGGATGACCTGCTCAAGCAGTTGTTAAAGCAGTACATTGGAAAGATCGAATTGCATCACGCTGAATATCCACAGCATGTCTGCCTGGTTTGTTTTAATACATTGCAAAACTTTGACAAGTTCCGAAATCGAGCTCTCCAGTTCACTGCGAACCTGCAAACACTTGTGGAAGGCAGCGTCTCAAAACTGGAGCTGGATGACATTGAAGAAGAGGAGAAGGAAATTGctcatgaaaatttttatggcaTGACGTTGAAGGATTCATTAATGGAGACTGAAACAGTAGTCGTAATGGAACATGATATTTCAGGGTTAGTCAATTGCGAATTTCAGACACCAGATCCCTTCAGCAGTGATATTATTACCAAAAGCGCTAACGACAATATAGCTGTTATGGAAACTATTATACAAGTTGGCAATAATGAGGACATtgctgataatgatgataacaaTGCCCACGATTGCATCGATGAGAAGACCACCGACGATGAAGACAAACCTTTAGCAAGTTTAAGGTCTAGTAGTAAGAAGAAACTACGGGATGCGACGAAATCGCCGCTACGTCCCAAGTGCCGCCGTAGGACCAAGAAAGAAATGGAACTGGTTCGCAAAGAACAGGCTGACAGGGATGCATTGCGTGGCAAGCCCCGCAAAAAAGGCACCAAGAACAGTTACCGCTGCGAACAATGCAATCACAGTTTCGCACACAAACTAACGCGTGATGCGCATGTTCGCAAGGTGCATGAGGGAAGCAAGCGTCCCTATCAGTGCGACCGCTGTGACAAAACCTACACCTTCTTCGGCGGCCTCTGGACGCACATTCGAGAGATACACGAAGCCGAGCAGCGTTCCTATCCTTGCGCCTATGCTAATTGTGATAAGATATACACGAGCCTGATAGCGATGCACAAACATCGACGCGAAAAACATTTAGGTCTTGTGAACAATAAAACGTACGTCTGTGAGTTGTGTGGCACCACTTTCAATCAGATTGCCAACTTAAAGTATCATCGGCGCAAAAAGCACCCTCTTGAAACCGGTGCCGACGACATGATCAAGGAGGAGTCGAAGGAACGCCACATCTGCAACATCTGCAACAAACAATTTCACTCCCGTTACACACTCAAATACCATGTGCTGCAATTGCATTCGAGTGACATGAAATTCGAGTGTAATGTTTGCGGCCGCCGCATGGCCAAGAAGTTTATGCTGGTACAACATATGCGCATACACACGTTAGACCGGCTGCCATGTGGACAGTGCGAGAAGCAATTTATTCGAAAACACGAGCTGGAGGCGCATGTTCGGGCAGTGCACTTGAAATTGAAACCGTATGGGTGCCAGTACTGTCCGGAGACGTTCGCTTGCCGTAAAACGTTGAGGCATCATGAATATATACACACTGGAGAGAAACCGTACGTCTGCGACATTTGCGGACAAGCTTATCGACAGCAGACATCGCTAAAGACTCATCGAAAGACTCACAATACAATGGCATCGGAAACATCTCCGACTAACATCCGCGAAACTATAGACAGTGTATTAGGAGACACAAATGTTTAG
Protein Sequence: MSSFLTGEKAIQHCRACLININNLENLDSETLPVTVTQDQQLPLFIDLRSSQEILHLFCILTDTKENQEEEIAVQHKNVCVDCFRILEEFEKFRKRLLECDKVFKAALVENIEEDLVQNGTAQKATAEVKFCENAEKEEEDNLMREEIVHHPVESVFIFESEPFNTKGVNNTEFLTRETPALEYNRASFNEEQDTEKHHGFIDEEDALLQTEKSLGFQETTTLEIPRISDTEKSTEKFNNKEHSDVHRNKECVNEDANDEEFNDYVFECNQCKRKFLYKYIYEAHLRGAHQAQLKRPYSCDHCDKRYKSVDTLRYHLHKVHNSNGQTFICTICKKIYKTAASLKQHHRDQHLGQKQRKTYICEYCGAGFIGTKNLENHYAAKHGEISGFHPGRYECSVCKRRFNNAFNLQYHSLRQHATDNMLQCECSICGVKFAKKFMLVAHMRAHASVEDKFECDQCGRLFTQKFDVVQHIRVVHMKVKPYHCSHCSRSFGTEKTLRHHIYTHTGEKPYQCKICGRPFRQPSALKTHMKNFRPPSENKRDVNLIAISLTTDDLLKQLLKQYIGKIELHHAEYPQHVCLVCFNTLQNFDKFRNRALQFTANLQTLVEGSVSKLELDDIEEEEKEIAHENFYGMTLKDSLMETETVVVMEHDISGLVNCEFQTPDPFSSDIITKSANDNIAVMETIIQVGNNEDIADNDDNNAHDCIDEKTTDDEDKPLASLRSSSKKKLRDATKSPLRPKCRRRTKKEMELVRKEQADRDALRGKPRKKGTKNSYRCEQCNHSFAHKLTRDAHVRKVHEGSKRPYQCDRCDKTYTFFGGLWTHIREIHEAEQRSYPCAYANCDKIYTSLIAMHKHRREKHLGLVNNKTYVCELCGTTFNQIANLKYHRRKKHPLETGADDMIKEESKERHICNICNKQFHSRYTLKYHVLQLHSSDMKFECNVCGRRMAKKFMLVQHMRIHTLDRLPCGQCEKQFIRKHELEAHVRAVHLKLKPYGCQYCPETFACRKTLRHHEYIHTGEKPYVCDICGQAYRQQTSLKTHRKTHNTMASETSPTNIRETIDSVLGDTNV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -