Basic Information

Insect: Conops quadrifasciatus
Gene Symbol: -
Assembly: GCA_949752815.1
Location: OX457081.1:2723333-2725942[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.00071 0.074 14.1 0.2 1 23 115 138 115 138 0.96

2 13 0.00059 0.061 14.3 3.2 1 23 143 165 143 166 0.95

3 13 5.1e-06 0.00054 20.8 3.8 2 23 176 198 175 198 0.96

4 13 0.00011 0.012 16.6 7.3 2 23 372 393 371 393 0.98

5 13 5e-05 0.0052 17.7 5.8 1 23 399 422 399 422 0.95

6 13 0.00034 0.036 15.1 0.7 1 23 427 450 427 450 0.95

7 13 6.7e-05 0.007 17.3 4.9 1 23 460 482 460 482 0.97

8 13 9.6e-05 0.01 16.8 3.0 1 23 487 509 487 509 0.97

9 13 1.1e-07 1.1e-05 26.1 0.4 1 23 515 537 515 537 0.96

10 13 3.9e-07 4.1e-05 24.3 0.6 1 23 543 565 543 565 0.99

11 13 7.7e-07 8e-05 23.4 1.7 3 23 573 593 572 593 0.99

12 13 4.4e-07 4.6e-05 24.2 2.4 1 23 599 621 599 621 0.99

13 13 0.092 9.6 7.4 0.3 1 23 626 649 626 649 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.00071	0.074	14.1	0.2	1	23	115	138	115	138	0.96
2	13	0.00059	0.061	14.3	3.2	1	23	143	165	143	166	0.95
3	13	5.1e-06	0.00054	20.8	3.8	2	23	176	198	175	198	0.96
4	13	0.00011	0.012	16.6	7.3	2	23	372	393	371	393	0.98
5	13	5e-05	0.0052	17.7	5.8	1	23	399	422	399	422	0.95
6	13	0.00034	0.036	15.1	0.7	1	23	427	450	427	450	0.95
7	13	6.7e-05	0.007	17.3	4.9	1	23	460	482	460	482	0.97
8	13	9.6e-05	0.01	16.8	3.0	1	23	487	509	487	509	0.97
9	13	1.1e-07	1.1e-05	26.1	0.4	1	23	515	537	515	537	0.96
10	13	3.9e-07	4.1e-05	24.3	0.6	1	23	543	565	543	565	0.99
11	13	7.7e-07	8e-05	23.4	1.7	3	23	573	593	572	593	0.99
12	13	4.4e-07	4.6e-05	24.2	2.4	1	23	599	621	599	621	0.99
13	13	0.092	9.6	7.4	0.3	1	23	626	649	626	649	0.95

Sequence Information

Coding Sequence: ATGGCTCCTGGTCAAAACCTGGACATGGAACGCATTTGTCGTGTATGTTTGCAGGGAAACATCGAGCTCTTCTTGCTGTTCGATGAAAGTCATGCTCTGGATGGAGTTTCAATTTCGCAAATGTTAACTGAATGTACCATATACAAGGTGGAACGCCATGATGATTTGCCGCACCAGATCTGCAGCAGTTGCATGGAAACGGCAAAAAATGCATATATCTTCAAAAAACGAACGGAAAATTCTTACCGTCAGCTAGTGGGTTTGCTGGGCGAGGTGTGCCAGGAGCAGGTAGTTACTGGCATGAAATCAGAACAATCAACGCAGACCGATAAATTATCCATATATCCCTGCGAAATGTGCGatgcaaaatttttcgaaCCAGAAGATCTGCGAAATCATCGCATGAACTCCCACAAAGGAAACAGTTATAAGTGCAAAGTGTGCGGACAAAAGTTTGCCAGACTTCATCGTTTGCGCGGGCATTTAGCGCTGCACCATCCCGAAGAGGGATTGACGCACGATACGAAATGCACCGTTTGCGGAAAGCAGTTTTCCCGAAGAGATCACATGAGACgacatttgaaaaatatccATGGAAAAGTAGTTCCTAGTGTGGAAAGATGTAATAAAGCTACTTTGGAAGAACCGGAGATCAATATCAAGCGTGAAATGGAGTTTTTACATTTGAAGGATGAGTGTACAAATGTTGCGAATGCAGCAATCTGGGACAATTATTCAGTCAGAGAAACGGATAGTGACGATGGTGAGGATGGCTTCAATGCTACTAATCCGATATCTAGCGATAATCACGACGATGGTGATGAGGAGAAGCCTTTGTTGGGTATCTCTGTGAAACCACAGCTCAAAACTGAGCCtcttgatgatgatgtttcCAACAAACACTTGGAACCACCGGCCAGTTCGTCTTTGGAACTCATTCTTAAATCTGAAGTTGATTTTAgagattttgaaaaagaatATGTGAGTAATAATGAGGATGATGAAACAGAAGCTGAGGATAAAATACCAGCCGAGAAAacttcaatagttcgtgaatatCTGGAAAACAAGTCTACTGTACGTCGGCGTACCTATTCGAAATCGAAGGATAATAAATGTCCCGAATGCCAGCGGGTTTTCTCACGACATTGCCACGTACAGCGCCACATGCTAACTCATACGTCTGAGAAACCACACGAGTGTCCGCACTGCTTGAAACGCTTTACCAGACGtgatcatttaaaaaatcacgTCGAAAGCCTGCATGGCGCCAAGCAGCACAAATGCGATCAGTGCGAATTGGCCTTTCCACGCAACGACGCATTGTTACGCCACAAAGCATCCAAGCATAGCGATGGACCGAATGCGAATAAGGTACACAAATGCGATTTCTGCGAAAAATCGTTCGTTACCAAAACTTATTTGCGCAAGCATCGCCTCCTACACACCGACCGCGTTTTCGCTTGCAAACATTGCGATGAAACCTTCAAGGAACGTGCGCAATTCCGAGAGCATGAGAAAACGCACAATGTTGAGCGGAATTTTCTCTGCTCTATTTGTGGCGAAAGCTTTGCGCGTAATGACTACTTGCGCGTGCACATGCGCAGACACACCGGCGAGAAGCCTTATAAGTGCAAGTATTGCGACAAAGGCTTTCCACGTGCCACCGACTTGAACGTACACGTGCGGTACCACACTGGGCATAAACCAAATCTGTGCAATCTGTGCGGTAAAGGTTTCCATCGCGCCTACAATCTTACCATTCACATGCGCACTCACACCGGAGAACGTCCATTTCAATGCGAGCATTGCTCGAAAAGCTTTGCTCAGAGCAATGATTTAAAGGCGCATGTGCGTCGTCACACTGGCGAACGCTTTAAATGCAATAACTGCGAAGCCGGTTTTTTACAATTGTATGGTTTACGCCACCACGCGCTGATAGCGCATGGTATCCAAATGGATACTACCACGGGACGCTTGCAGAAGTTTCCGAAACTTGAGGCAGCAACTGAAGCGGCGCTTCAAAATCAGTTCCAAATGTCATTTGGAAAAGCCAGAGTTCAAGAAACTCAGCAGCAGGAACaggaacaacaagaacaagaacagcaGGGACAGCAAACATctcagccgcagcagcagctacaGTCGCAGCCGCAGTCGCAGCCACAGtcgcagcagccgcagcagcagccgcagtcGCATCAGCCGCAGACACAGCAGCAGAACGAGGCACAGCAGCTTCTACAAGAACAACATCAGCAGGAGCAACTGCAACGCCAAAATCAACAACTAGAACTACacttgcagcagcaacaacaactacagcaatTGCCATAA
Protein Sequence: MAPGQNLDMERICRVCLQGNIELFLLFDESHALDGVSISQMLTECTIYKVERHDDLPHQICSSCMETAKNAYIFKKRTENSYRQLVGLLGEVCQEQVVTGMKSEQSTQTDKLSIYPCEMCDAKFFEPEDLRNHRMNSHKGNSYKCKVCGQKFARLHRLRGHLALHHPEEGLTHDTKCTVCGKQFSRRDHMRRHLKNIHGKVVPSVERCNKATLEEPEINIKREMEFLHLKDECTNVANAAIWDNYSVRETDSDDGEDGFNATNPISSDNHDDGDEEKPLLGISVKPQLKTEPLDDDVSNKHLEPPASSSLELILKSEVDFRDFEKEYVSNNEDDETEAEDKIPAEKTSIVREYLENKSTVRRRTYSKSKDNKCPECQRVFSRHCHVQRHMLTHTSEKPHECPHCLKRFTRRDHLKNHVESLHGAKQHKCDQCELAFPRNDALLRHKASKHSDGPNANKVHKCDFCEKSFVTKTYLRKHRLLHTDRVFACKHCDETFKERAQFREHEKTHNVERNFLCSICGESFARNDYLRVHMRRHTGEKPYKCKYCDKGFPRATDLNVHVRYHTGHKPNLCNLCGKGFHRAYNLTIHMRTHTGERPFQCEHCSKSFAQSNDLKAHVRRHTGERFKCNNCEAGFLQLYGLRHHALIAHGIQMDTTTGRLQKFPKLEAATEAALQNQFQMSFGKARVQETQQQEQEQQEQEQQGQQTSQPQQQLQSQPQSQPQSQQPQQQPQSHQPQTQQQNEAQQLLQEQHQQEQLQRQNQQLELHLQQQQQLQQLP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -