Cqua006020.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Conops quadrifasciatus
Gene Symbol
-
Assembly
GCA_949752815.1
Location
OX457078.1:3640001-3645272[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 28 6.2e-05 0.0065 17.4 1.1 1 23 265 287 265 287 0.97
2 28 7.3e-06 0.00076 20.3 2.4 1 23 293 315 293 315 0.99
3 28 0.085 8.9 7.5 3.0 2 23 347 368 346 368 0.97
4 28 0.01 1 10.5 2.3 1 23 452 475 452 475 0.95
5 28 0.85 88 4.4 1.3 1 22 482 503 482 503 0.94
6 28 0.00068 0.071 14.1 1.3 2 23 554 575 553 575 0.97
7 28 1 1.1e+02 4.1 0.1 5 22 587 604 586 606 0.86
8 28 0.088 9.1 7.5 1.3 2 23 615 636 614 636 0.95
9 28 0.03 3.2 9.0 0.5 1 23 728 751 728 751 0.95
10 28 0.23 24 6.2 3.8 1 22 759 780 759 780 0.94
11 28 0.0039 0.4 11.8 0.5 2 23 790 812 789 812 0.96
12 28 0.0054 0.56 11.3 2.0 2 21 829 848 828 850 0.93
13 28 5.1e-07 5.3e-05 24.0 0.3 1 23 857 879 857 879 0.98
14 28 3.9 4.1e+02 2.3 2.2 3 23 920 940 918 940 0.79
15 28 0.0016 0.17 12.9 1.3 3 23 1026 1047 1024 1047 0.96
16 28 0.28 30 5.9 1.0 1 23 1054 1076 1054 1076 0.93
17 28 0.0026 0.27 12.3 1.5 1 23 1084 1107 1084 1107 0.95
18 28 0.0011 0.12 13.5 1.5 1 23 1122 1144 1122 1144 0.96
19 28 0.00022 0.022 15.7 3.1 1 23 1151 1173 1151 1173 0.99
20 28 0.0033 0.34 12.0 0.2 3 21 1201 1219 1199 1220 0.95
21 28 0.019 2 9.6 0.1 1 23 1286 1309 1286 1309 0.95
22 28 0.36 37 5.6 1.7 2 21 1347 1366 1346 1369 0.94
23 28 0.0013 0.14 13.2 3.7 1 23 1402 1425 1402 1425 0.98
24 28 1.5e-05 0.0016 19.3 0.2 2 23 1458 1479 1457 1479 0.95
25 28 0.00025 0.026 15.5 3.1 1 23 1485 1507 1485 1507 0.99
26 28 2.4e-07 2.5e-05 25.0 3.4 1 23 1513 1535 1513 1535 0.98
27 28 2.2e-07 2.2e-05 25.2 2.4 1 23 1541 1563 1541 1563 0.99
28 28 0.0014 0.15 13.1 0.1 1 22 1569 1590 1569 1593 0.90

Sequence Information

Coding Sequence
ATGGAGACAGATTTGGAATATTTACGTTCCAACGCGGGCTCAATTTGCCGAACTTGTTATGAAATAAGTTTACATCTCCATCCGCTCCATGAGAAAACAGAGCAATTCCCGCTGAAGTCGTTAGCGGATCTTTTATTTGACGTAGCGAAAATTGATATAAAGCAAGTGGTTAATGAAGGTGTCATGCCCGCCCAACTCTGTGGAAACTGTTCTCGGAAGCTCAAAAATGCATATAAATTTGTACAGAGAGCACAGGAGATTAATAGCAAATTGCTGCAATATTCGCAATTGCTAAGTGGCAGCAACCTGGAAAATATAGACGTGGGCAAACATTCTGATTGCCTTTCGGAAGCGCCAATAGATATACCGCTGCATGCAGCAGATTTCCTCAAAATTAAGATGGAAGCCGAGGGTGCAGCAGATGAAACGATTTTCGAGTCATTTTCGGCAACTGAAACTCTTGAGAATAAAAATGCTGCGGAAAGCTTGGGAGGAAAGGCAATGAAGGAACTTTTCGACCACTTCGATGAGGAAGATGAGTGCTCGCTggcaaacataaaaaacaaaaataattccgaaaatatacatttaaagaatgaagTGAACACCGCCGAAAGCGTTCTACACGATTCAAAAGATCCTATAAAAACAATAGGAACCAAAAGAAAATCTGGACTCGAAGAAAGCGATTATCAAGACGATGGCTGCAATGATTCCGACAGTGATTGGCAAGATATTCCTAAGCGACGACGCGGACGTTATCGAAAAAGAAATTCGAACCGCAAATGTCGTTACTCATGTAAGGATTGCGGTAAGACATTTGCCTGGAAGAAGGATTTGACGCGCCATTCGCTAAGTCACAATCCAAATCCACCGTATCAGTGTAGGTTTTGCGACCGGAATTTCACGCGTAAAGATAAGCTAAACGATCACATCAAAGTACATCAGCGCAAACCAGACGCCTTCGGACGACGAACGCGTCATCCGGAATGGAAATTTGCTGAGCGCCTGTTTTCGAGCAAGAACTTTCAGAAAATTCAATGCAAGTTATGTAACAGTAAGTTTGAATCTACACAGCTGCTGCGCTCGCACCTTCACAGTCATGCAGAGCAGAACACACTTCACATGCTTTGCTTGGATAGCGAAGTAATTCAGGTTCTGCATTCACAAGCCGCACAGAGTCTGGACGAATTGAAAGCTCAGGTTTGTCGTGATGTGAAGGAGAAGCGCTTCGAGAAGTTCTATGACATTGTGAATGAGCACGGATACGAGCTTAGCATAAGCGATTCGGAGGCAGCTGCAGATGTAGATACGAATGCGAGTGCGGCAGACATCGAGGCTATTGCCACTAAATATAAATGCGAATTATGCTCCGAGACTTTCTCCCGGAAATTTCGCGTTTTCGAACACCTTAAGGAGAAGCATGCTGACGACCGCATGCCGTACAAGTGTAACGTGTGCAAGGTTGACTTTGTGTGTCGTGAAATGTTCGAAGTGCACACGCGCACTCAGTGCAGAAATAAGGAAAAGAAGTACCAATGCTTGAACTGCCCCGGAAAGTTTATGTGGCTGAAGAATTTGCACAACCACAGCTGCTCCAATCGTTTCAACAGTCCTGAATACCGAACCAATCAGTTGCCGAAGAAACGAGAGATCTTGCAGTGCAGTGTCTGCGATGAGACGTTCCTGCGCAGAAAAGAGCTGCGGAGACATAAGGAGACACATGATTCGTCTGCTGGCACATCGCTCGAGTATACGATGTGTTCCGCGAGGTTTTCAAAGACCGATAACTTACGACTACACTACGGAGAGGAGCACCACGCACCGTCACGACGTCGCATTGAGTGCTGTTTATGCGGCGAGCAGTTTAACTTGATGAAACAACTGCGAGAACATTTATCCCAACATTCCGATGGTTATACCGGAATCAAGACCCAGAGCGGGTCTCTCTTTTTCAAAACCTTTGCTCCTGAGACTTGCACAGAGCAAGCGCAAGCTGACGACGCATCAGCGTCCGCGCATCAGGTCGCGCACTCAATATGTAAAGATTATGTGATGCAAAATCTGTCACGTTTTTATATAGCCGTGGACGGAAGCGGTAATGAGTTAGATTTGTTTGACTCTGAAGGTGACAGCGAGAGTGAAACGGCCGCTAACTCTTCGCAGCAGCAGAAAATTACGTACAAATGTGAAGTTTGTTTGCAAGAATTTAGTAGACGAACAAAAATTCTGCTTCATCAACAGGCAGAGCACAAAGCGTTGGAAACATGGCCGCATCGCTGTGAACATTGTCAGCGACAATTTGTGTGCGCTGAACTGCTGGAGCATCATATCAACACCGATTGCGGcaacatttacaaaaaatggaaCTGCACCAAGTGTTCGACGCGTTTCGTGTGGCAGGAAAATCTGGAAACTCATATCAGGATTAAGCACACAGATCCTGAGCAGCAGCAGATCATTCGTAAAATGGCCAATAAGCTGCAGTGCGATGAATGcgacaaaacgtttatttggCCGAAGGATTTGAATCGGCACAAACGGTGCCACCTACCTGACGACGAGAAGTACGAGTGCCCCCTTTGCCCGCGCCGTTTCAATCGCAAGGACAATATGCAGgctcatattaaaatacatggTGTTACGGAGGGCGCGACAGGAACGTTGAGAAAGGACTTTGCTAGGGTTGGCAAGCAACCAAGGACGAAAGCTGTCGATGAGAATCTGTGCAAGCCTAATGGTTGCAAAGTGATTCAGTGCATGATTTGTCTTTCGAGGCACACGAAAATATCGGATTTGCGCACCCATTTGCGTACCCATCAATACGTCGTTTCTCTCGATCAGCGGGGAAGGGATGAGGAAACGGTCGAAATCTCCAAGCAGCTCTATCCCGACGAAGAGCTCATGCACCAGGAAGAGACGTTAATAAAGCGCATTATCGCGGATGTTACGCACCATCGTTGGGATCGTTTCTATTCCATAACAAATGAGGTGGGCTATGAGTTAAACATCAGCGACTCTGAGACCGAGAGTGATTCGGACGAGGAGCGAGAAACGGCGCGACATTCGTACGGTTGCGATTTGTGTGCTAAGACATTCCAGAGGAAGTACCAGCTTTTCGAACATCAAAAGTACACGCACGCGTGGCTGGATTTGCCGCACGTCTGCGACGTTTGCGAAGCGAGATTTGGCTCAGAGGAACTTTTGCAAATGCATTGTCGAGAACACTGTAAGAACTTCGAGAAGCGATTTCTTTGCAAGAAGTGTCCTCGGAAATTCATGTGGAAGGACAATTTACAAAATCACGAACGAACGCTACATCCCGACAAAtcagaacaaaagaaaaagTTCAAAGTCAAGCGGTACGAATGTCAGGAATGTCATCGTACGTTTGCTTGGCAAAAGGATCTAACGCGCCATTTGGTGCAGCACCAACCCGAAGCAAAACTCTTTAAGTGTTTCTGGTGCCCTCGTAGATTTTTCCGCAAGGACAAATTATATGTGCACATCAAGCGGCATGATGTGACGCCTCAGTGTCTGGCTGCTGCTGAAAGCTATGCGCGCGCTAGCAGCGAACCCAATGGCGTTAAGGAGATCTTTTGCAAGATTTGCAATACACAATTCGCGACTATCACTTCTTTGCGCTCTCATATACGACAGTGTTCGTTTGACGCTGACTTGTGCTCTTTGGGTGCTCTCAAGCTAGAATCACCCAAAGCACCGCACTATAACTACGACTCTCTGTTGAACTATTCGATTACTAATCAGCTGGGATTCGAGCTGCACCTAGACGACTCGGAATCAGATGCAGACAGCCCGGTTATGCTGCCCAAAGCGGAGTGCACGCCACCTCAATACACCTGCGAACTGTGCGGTGTGGAGTTCTGGCGCAAATATGAAATGGCACGGCATCTGGTGTCCGTCCATTCGAATGAACAAATGCCCCGAAAATGTGAGAAATGTTGTTTCAGGACAGCGTCCAAGGATATTTTGGATCATCATCTGCGCACTCAGTGCTTCAGTGTGGAGAAACAGCTGCAGTGTAGTGTATGTTCGCTGAAATTTATGTGGCAAGAGAACCTCAGCAGGCATATGCAATGCCTGCATCCGCAAGAAGCTCTACAAAACAAGGACAAGGAGGGCGGCGTGgagaagaaggaggaggaggaggaggaatcTCCCAAGTCGAAATTGAAGAGGTCCTTTCAATGTGATCTTTGCAAATGCAAGTACAATCGGAAGGACCGCCTCACGGCGCACATCAAGAAAGCGCACACAAAAGGTCAGGAGCCGAACAAAGCGAATGCAACTGCTCAAATAGATCCCACCACGGGAGAGCAAGTGCAAAAGCCGCCATTGGAAAAGAAATTTCTCTGTGCGTTTTGTGGACGTGCCGTCACTTCTTCGTCTAATCTCATAATACACATGCGCAGACACACCGGAGAAAAGCCGTTTAAGTGTGACTTTTGCGACATGGCATTTCCGCGTTCATCCGATTTACAATGCCATCGCCGCACGCACACCGGAGAGAAGCCGCACAAGTGTACCGTGTGTGATAAAGCTTTTTCGCGGTCCTACAAGCTGCAGACGCATATGCGCATTCACTCCGGCGAACGTCCCTACAAATGCACCTACTGCGAGAAGAGTTTCACGCAATCGAACGACCTGACGCTGCACATACGACGCCACACTGGAGAGCGACCCTACGTGTGCGGAATATGTGGTGAACGGTTCATTCAGGGCACGGCTTTGAAGAATCATCGAACGATGCGCGGCCACTTTGAAGACGTAGAACCCAGAAAGCTGACGATATTGGAGCAGTTttag
Protein Sequence
METDLEYLRSNAGSICRTCYEISLHLHPLHEKTEQFPLKSLADLLFDVAKIDIKQVVNEGVMPAQLCGNCSRKLKNAYKFVQRAQEINSKLLQYSQLLSGSNLENIDVGKHSDCLSEAPIDIPLHAADFLKIKMEAEGAADETIFESFSATETLENKNAAESLGGKAMKELFDHFDEEDECSLANIKNKNNSENIHLKNEVNTAESVLHDSKDPIKTIGTKRKSGLEESDYQDDGCNDSDSDWQDIPKRRRGRYRKRNSNRKCRYSCKDCGKTFAWKKDLTRHSLSHNPNPPYQCRFCDRNFTRKDKLNDHIKVHQRKPDAFGRRTRHPEWKFAERLFSSKNFQKIQCKLCNSKFESTQLLRSHLHSHAEQNTLHMLCLDSEVIQVLHSQAAQSLDELKAQVCRDVKEKRFEKFYDIVNEHGYELSISDSEAAADVDTNASAADIEAIATKYKCELCSETFSRKFRVFEHLKEKHADDRMPYKCNVCKVDFVCREMFEVHTRTQCRNKEKKYQCLNCPGKFMWLKNLHNHSCSNRFNSPEYRTNQLPKKREILQCSVCDETFLRRKELRRHKETHDSSAGTSLEYTMCSARFSKTDNLRLHYGEEHHAPSRRRIECCLCGEQFNLMKQLREHLSQHSDGYTGIKTQSGSLFFKTFAPETCTEQAQADDASASAHQVAHSICKDYVMQNLSRFYIAVDGSGNELDLFDSEGDSESETAANSSQQQKITYKCEVCLQEFSRRTKILLHQQAEHKALETWPHRCEHCQRQFVCAELLEHHINTDCGNIYKKWNCTKCSTRFVWQENLETHIRIKHTDPEQQQIIRKMANKLQCDECDKTFIWPKDLNRHKRCHLPDDEKYECPLCPRRFNRKDNMQAHIKIHGVTEGATGTLRKDFARVGKQPRTKAVDENLCKPNGCKVIQCMICLSRHTKISDLRTHLRTHQYVVSLDQRGRDEETVEISKQLYPDEELMHQEETLIKRIIADVTHHRWDRFYSITNEVGYELNISDSETESDSDEERETARHSYGCDLCAKTFQRKYQLFEHQKYTHAWLDLPHVCDVCEARFGSEELLQMHCREHCKNFEKRFLCKKCPRKFMWKDNLQNHERTLHPDKSEQKKKFKVKRYECQECHRTFAWQKDLTRHLVQHQPEAKLFKCFWCPRRFFRKDKLYVHIKRHDVTPQCLAAAESYARASSEPNGVKEIFCKICNTQFATITSLRSHIRQCSFDADLCSLGALKLESPKAPHYNYDSLLNYSITNQLGFELHLDDSESDADSPVMLPKAECTPPQYTCELCGVEFWRKYEMARHLVSVHSNEQMPRKCEKCCFRTASKDILDHHLRTQCFSVEKQLQCSVCSLKFMWQENLSRHMQCLHPQEALQNKDKEGGVEKKEEEEEESPKSKLKRSFQCDLCKCKYNRKDRLTAHIKKAHTKGQEPNKANATAQIDPTTGEQVQKPPLEKKFLCAFCGRAVTSSSNLIIHMRRHTGEKPFKCDFCDMAFPRSSDLQCHRRTHTGEKPHKCTVCDKAFSRSYKLQTHMRIHSGERPYKCTYCEKSFTQSNDLTLHIRRHTGERPYVCGICGERFIQGTALKNHRTMRGHFEDVEPRKLTILEQF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-