Cqua001802.1
Basic Information
- Insect
- Conops quadrifasciatus
- Gene Symbol
- retn
- Assembly
- GCA_949752815.1
- Location
- OX457077.1:15806919-15821139[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.1e-20 1.6e-16 61.0 0.0 15 89 19 91 9 91 0.95 2 2 2 7.8e+03 -2.1 0.3 8 21 223 240 216 278 0.51
Sequence Information
- Coding Sequence
- atGACTCCGCAACGAATGCACCGCGCCGCACCGCGCCGGCCTCTGCCAGCTACAGCAAAGGGCACGCCCATTAATCGTTTGCCGATTATGGCCAAATCGGTGTTGGATCTATACGAACTGTATAACCTCGTTATTGCACGCGGCGGACTCGTCGACGTCATCAACAAGAAATTATGGCAGGAGATCATCAAAGGACTGCATCTTCCTTCGAGCATCACAAGCGCCGCCTTCACGTTGCGAACACaATACATGAAATATCTTTATCCATACGAGTGCGAAAAGAAGAACCTCAGCTCACCGGCTGAACTGCAAGCGGCCATCGACGGCAATCGGCGCGAAGGCAGACGCTCGAGCTACGGCCAGTTCGAAGCGATGCACAATCAGCTGCAGATTCCTCAGTCGATCCGTCAATCGTTACCCAGTGCCATGCAACAGATGTCGCCGCTGGCGTTGGTGACACATGCAGCCGCCCAGAACGGCCCCACCGCACAGTCAGCGGTGGCTGCGGCCGTGGCACATCACCGACTGATGGGCCCCGCCTATTCCCAGGTGCCGAATCTCATGGCGCACGAAATCGAGCAACGCATGATGGAATATTTGAAGATTATACAGGGCTCCAAGGAGCCTCTGTCGACGCCTCTGCAacaccaccagcagcagcagcaagagctACAGCAGaagcaccaacagcagcagcagcagcaccaacagcatcagcaacaacagccgcaGCAGCCACAACGACCGCGTTCGCAGAGTCCAGAAATAACGACACGCGAAGCTTTGAATGCTTTGGAAATGTCGCGTGTCGCGTTGTGGCAAATGTATCACAACAACACAAGCCCGCCCTCGTCTCTGAATACGTCTCCGCAGGCGGGCGTGGGAGCGGCAGTgggcgcagcagcagcagcagcagctgctggtGTCGGCATCGAGCCTCAGCGTAGCGAAGCGCTGAACCTCTCCGACTCACCGTCGCCCAATCTCACCATAATAAAACGCGAGCGCGAGCGCGAACCCACTCCGGACCGTCTGGAGTTCCACCACTTGCCGCCACCGGCCAAACGCAGCGCTGTCCTCGGCGGCGTTGGCGGAAACAGCCTCAGCACTAGCGGCCTCGTACCGAACTTCTACCTGCCGCACAGCATAGCAAATGCCGCAGGCTTCCCAACGCACAACTTGCGGCACGATTCGGATGGCGAGCACGAAGGCgatggcgacggcgacggcgacgtcGAGGCAGAGATGGACGGCGAGGATGAGGAAGAGGACGATGAAGACGAAGAGTGCGGCGCGGCAGTGAACACTTCTGCGGAAGGGCGTCGTCCCTTGAATGGACATCACGACGAACCGCACACGCACTGCAACGACAAGTCCGACGACTCCGCTTTCGAGAGCTCACCGACCACCAGCGGATCGGCCGGAAATCGTCATCTCTCGCCGGTCTCATCGAAAAAGATTCACCTCAGtaaacagcaccaacaacaccagcagcagcagcacagaaTCGCTGAGAATCGCAGCGCCACAAGCCTCGGTGGTGCTGTCGCCAGTAGCAATAGCTCTTTGGAGCAGCTCAATCTCTTGTCGGGCATGCAGTTCCGAGTAGCCCGAAATGGAACCGGAATCAATGGTGAGCAACAACTTGTCGTCAACCTCGAGCTGAACGGCGTCCAATACTCTGGAATATTGATGGCAAACACAACGCCGTCTTCCGAATACGTGGCCTCGGCAGCGGCAAGTGATCACAGCGTAGAATCAGCAACAGAGGCGGCAGCAGCtgaagcaacagcaacaaacgcTCCACTGCATTCTCTTAAGGAAACCGCAAATACCGCAAACGCTACCGTaatgccatcatcatcatcatcagagaCAGCAGCAGTGGCGGCTGCAGCTACAACCACTGCAACAATAACACTAtcaccaacatcatcatcatcatcatcgtcctcatcctcatcagcaacagcaacagcattaGCATTGACACCAACAGGGTCAAGCTTAGAACATGTAGCAgcggaagcagcagcagcagtcaccACCACATCTATAGCAACAGTTGCAGCCTCCACAATGAGCACCGCGCTGATGCTGACGAATGGTCCCAGCAATCTTTCAAAGGAATCATTGATCTCTTCATCGTAA
- Protein Sequence
- MTPQRMHRAAPRRPLPATAKGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSSPAELQAAIDGNRREGRRSSYGQFEAMHNQLQIPQSIRQSLPSAMQQMSPLALVTHAAAQNGPTAQSAVAAAVAHHRLMGPAYSQVPNLMAHEIEQRMMEYLKIIQGSKEPLSTPLQHHQQQQQELQQKHQQQQQQHQQHQQQQPQQPQRPRSQSPEITTREALNALEMSRVALWQMYHNNTSPPSSLNTSPQAGVGAAVGAAAAAAAAGVGIEPQRSEALNLSDSPSPNLTIIKREREREPTPDRLEFHHLPPPAKRSAVLGGVGGNSLSTSGLVPNFYLPHSIANAAGFPTHNLRHDSDGEHEGDGDGDGDVEAEMDGEDEEEDDEDEECGAAVNTSAEGRRPLNGHHDEPHTHCNDKSDDSAFESSPTTSGSAGNRHLSPVSSKKIHLSKQHQQHQQQQHRIAENRSATSLGGAVASSNSSLEQLNLLSGMQFRVARNGTGINGEQQLVVNLELNGVQYSGILMANTTPSSEYVASAAASDHSVESATEAAAAEATATNAPLHSLKETANTANATVMPSSSSSETAAVAAAATTTATITLSPTSSSSSSSSSSSATATALALTPTGSSLEHVAAEAAAAVTTTSIATVAASTMSTALMLTNGPSNLSKESLISSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -