Basic Information

Transcription Factor Domain

TF Family: zf-GATA
Domain: zf-GATA domain
PFAM: PF00320
TF Group: Zinc-Coordinating Group
Description: This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 1.3e-13 4.4e-09 38.2 6.9 1 35 17 50 17 51 0.86

2 3 0.96 3.2e+04 -3.0 0.1 13 23 65 75 63 76 0.69

3 3 0.63 2.1e+04 -2.4 0.7 16 24 91 99 89 100 0.74

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	1.3e-13	4.4e-09	38.2	6.9	1	35	17	50	17	51	0.86
2	3	0.96	3.2e+04	-3.0	0.1	13	23	65	75	63	76	0.69
3	3	0.63	2.1e+04	-2.4	0.7	16	24	91	99	89	100	0.74

Coding Sequence: ATGATATTGCTTTCAGCAACCATCGCTGGGAAATGGGTCAACTTGGCCTGTAGTAATTGTGGGACATGCACAACAACAATATTGTGGCGAAATCCTTTGGGCGAGATGGTGTGCAATGCATGCGGCCTCTACTATAAACTGCACAATGTAAACCGGCCGGCCACCATGAGAAGAGACACCATACACACGCGAAGGAGGCGGCCGAAGAGTGAGAAAATCGTCTGTCATCGCAATAGTAAAAAAGCAAACAGTGATTGTGCAAGTGGTGGCAACAGTGGCAGCAAGGAGTGCTGCAACGACATGATGGCAGCCCTGAGGAGGCAAATACAGCCACACCTTATGTTGGCTGCACTGCTGCAGCAGCAATCCCCTCCCTTCTCGCCCAATCCTCAGGCAGCGCTCCAACTAACCTCACAGTCAGGCTCCAGATCTCCGCCAATCATGTACAAAAAAGAGCTAGCCAATGATGAAACTCCTCTAAATCTTGTTGCAAGTGGTCAGTAG
Protein Sequence: MILLSATIAGKWVNLACSNCGTCTTTILWRNPLGEMVCNACGLYYKLHNVNRPATMRRDTIHTRRRRPKSEKIVCHRNSKKANSDCASGGNSGSKECCNDMMAALRRQIQPHLMLAALLQQQSPPFSPNPQAALQLTSQSGSRSPPIMYKKELANDETPLNLVASGQ

Sequence clustering based on sequence similarity using MMseqs2