Basic Information

Insect: Conomelus anceps
Gene Symbol: -
Assembly: GCA_948455865.1
Location: OX418219.1:24241363-24244004[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.00046 0.22 14.4 2.7 2 23 90 111 89 111 0.97

2 16 0.00015 0.074 15.9 1.5 1 23 153 175 153 176 0.95

3 16 0.0026 1.3 12.0 4.9 1 19 180 198 180 200 0.96

4 16 0.0049 2.4 11.2 0.5 5 22 217 234 208 234 0.88

5 16 0.003 1.4 11.8 1.0 3 23 241 262 240 262 0.96

6 16 3.6 1.8e+03 2.1 2.6 2 23 275 295 274 295 0.92

7 16 4.6e-07 0.00022 23.8 1.6 1 23 302 324 302 324 0.99

8 16 3.3e-06 0.0016 21.1 3.1 1 23 330 353 330 353 0.94

9 16 7.4e-05 0.036 16.9 3.3 1 23 363 385 363 385 0.98

10 16 0.0062 3 10.8 3.6 1 22 391 412 391 415 0.91

11 16 0.029 14 8.7 3.7 1 23 437 459 437 459 0.98

12 16 0.71 3.5e+02 4.4 0.7 1 21 493 513 493 517 0.80

13 16 0.087 43 7.2 1.0 1 22 540 561 540 564 0.90

14 16 8.8e-05 0.043 16.7 1.0 2 23 567 589 566 589 0.94

15 16 0.00033 0.16 14.9 1.3 1 23 610 633 610 633 0.96

16 16 0.0097 4.7 10.2 0.9 1 20 671 690 671 692 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.00046	0.22	14.4	2.7	2	23	90	111	89	111	0.97
2	16	0.00015	0.074	15.9	1.5	1	23	153	175	153	176	0.95
3	16	0.0026	1.3	12.0	4.9	1	19	180	198	180	200	0.96
4	16	0.0049	2.4	11.2	0.5	5	22	217	234	208	234	0.88
5	16	0.003	1.4	11.8	1.0	3	23	241	262	240	262	0.96
6	16	3.6	1.8e+03	2.1	2.6	2	23	275	295	274	295	0.92
7	16	4.6e-07	0.00022	23.8	1.6	1	23	302	324	302	324	0.99
8	16	3.3e-06	0.0016	21.1	3.1	1	23	330	353	330	353	0.94
9	16	7.4e-05	0.036	16.9	3.3	1	23	363	385	363	385	0.98
10	16	0.0062	3	10.8	3.6	1	22	391	412	391	415	0.91
11	16	0.029	14	8.7	3.7	1	23	437	459	437	459	0.98
12	16	0.71	3.5e+02	4.4	0.7	1	21	493	513	493	517	0.80
13	16	0.087	43	7.2	1.0	1	22	540	561	540	564	0.90
14	16	8.8e-05	0.043	16.7	1.0	2	23	567	589	566	589	0.94
15	16	0.00033	0.16	14.9	1.3	1	23	610	633	610	633	0.96
16	16	0.0097	4.7	10.2	0.9	1	20	671	690	671	692	0.95

Sequence Information

Coding Sequence: ATGTATTACCTGAAGGAAGCTGCAAATAAAATGATTAATCGTGGATTAGACGGGAAAGATAGGATAGAAGACTTGCAAGAATACAAATTACATTACCCCTGGAAGTACCATAAGGTAGCTGGATCATATTTTCTTAGAACAAAGGTTTTAGGATTTGAGCCAGCGGCTGAAGCTTTCATGTACACATGTTGTTTGTGTTGTGAAGAAATGAAAGATAGTGCGGTTATTGCCCATTCTAAATCACACTATCCTTTGACTAGTACCGACACGTGTCGTCTGTGCCATTTCAGTTTTTCATCGATAGAACTCTTAAGAAATCACATCAAAAGACATCTTATCATTATTGATGACGAATATGTAGAAGATATGCCAATCACTTATAGAGAATCGACTGGAAATAAAACTGCGAATAGTTCAATATTGCCGGCAAAGCCAGCGGAAAAGAAGAAACTAACTTATGTGTGCGAGTACTGCGGATTGGAGTACAAGCGTAAGGTACTCTATGTTAAGCATGTTCAGAATCATCATTTACAACCATTCAAGTGTAAAACTTGCAATAAAAGATTCGAAAGTCAAACCTCTTTTAATAATCATGGATGTCCAGCTGACGTCAAGGTAGAGTCCTGTGATAGTGATGTTTTAACATGCATGTGTAACAAGACCTTCAATACCAATAAAGAATACAAAGAGCACATCCTGACTTGCGATCAAGATATATTGTGTGAAGAATGTGGTTTAATATTCCAAACAAGAAAAGAATACAAAAAACATAATCTGACAAAACATTCCAAGATTCCGATCAGAAAAGATGGCGCAGCTTGGATTTGTGAAATTTGTGGCTGCAAACTTGGCAAACACAGCGCTAGAAAACATTATCTGACACATTCGTTCAAAGAAAAGAAGTACACATGTGAAATTTGCAACATGAAATTCCGGCAGAAGTGGTCGCTAACTAATCACATGCAATCACACAGCGATATTCGTCCATACGTCTGTGACATATGTTCTAAAACATTTAAAAGATCAGATCATTTAAGAGAACATCTATTCAACAAGCATCAAATCGGAAAATCCAAGCCCAGTGATTTCAAATGTGACGTATGCAGGAGATTTTTCACCAGTGAAACCTATCTCATGAGACACAAGCGACTTCATTCGACTGGCATGAGTTACGAATGCCATGTGTGCAAGGGTAGATTTCCCACTGAGCATAGCTTGAAGATGCATCAAACTCGGATGAAACATGATGGCGGAAATCTTGAAACTGTTAATGTTGTATCCACGGCTGCTTCTGACCGAATTAATAAGTTTAGGTGTAAATTTTGCTTTCAGCGTTATGGCTCTATGGCAAGTCTGAAAAAGCATAAACTCAAACACTGTTCAAAATTAATAGTAAAAGATGAAGCTAATGCAGAAAACGCAGGTATTAAAAATGAAACGGAAGTTAAAGAAGAAAATGAGGAGATGGAAAAAACGTATGAATGTCCGAAATGTAATTTAAGATACTTGACAGATTTCGGCTTGAAGCTTCATTATGCTCGCTCTAAACACTCTGAAGTAGAATTGAAGTATAAGAAACGACCGAAAAAGGATCCCAATGAAGTTAAAAACCCACGTTTCAAGTGTGTTCAGTGTAACGATATATTTAGTTCACTGGTAAGCTTGAGAATGCACAAGATTAAAAGAAAGCACTTTTCTCAGTGTCCACATTGCGGAAAAAGATTTGCTATGGAATTCAAACTAAAAGTTCACTTGGTTAAAGTGCATCAGCAGAAAGATGTTATTGTAGAGGAAAGCGATTTGTTGACTCAGGAAGAGAAGCTGCCTTATCAGTGCACAGTCTGTTCTCAGTTGTTTGCTATGAGACATAACTTGGAAGCCCATATGGTGAAGAAGCATTCGGGAAATGAAGAGCCCAGTAAACCTCCTCGTTCTACCGCTAAACTAAAGCAGCCGAAAACTGAACCTCTTGATGTATTTGAAGAGTTCACACAAGAAATCTCTGTCATTTACCATTGCACTGAGTGTTGGGAGAATTTTGCTTCCGAAGAAGATTTCAACAACCATACTCATGAAGCGAGAATTATATTGACCGAAGATCTGCCTGATAATGCAATCATTTCAGAAGTTATTGAATCATCATAA
Protein Sequence: MYYLKEAANKMINRGLDGKDRIEDLQEYKLHYPWKYHKVAGSYFLRTKVLGFEPAAEAFMYTCCLCCEEMKDSAVIAHSKSHYPLTSTDTCRLCHFSFSSIELLRNHIKRHLIIIDDEYVEDMPITYRESTGNKTANSSILPAKPAEKKKLTYVCEYCGLEYKRKVLYVKHVQNHHLQPFKCKTCNKRFESQTSFNNHGCPADVKVESCDSDVLTCMCNKTFNTNKEYKEHILTCDQDILCEECGLIFQTRKEYKKHNLTKHSKIPIRKDGAAWICEICGCKLGKHSARKHYLTHSFKEKKYTCEICNMKFRQKWSLTNHMQSHSDIRPYVCDICSKTFKRSDHLREHLFNKHQIGKSKPSDFKCDVCRRFFTSETYLMRHKRLHSTGMSYECHVCKGRFPTEHSLKMHQTRMKHDGGNLETVNVVSTAASDRINKFRCKFCFQRYGSMASLKKHKLKHCSKLIVKDEANAENAGIKNETEVKEENEEMEKTYECPKCNLRYLTDFGLKLHYARSKHSEVELKYKKRPKKDPNEVKNPRFKCVQCNDIFSSLVSLRMHKIKRKHFSQCPHCGKRFAMEFKLKVHLVKVHQQKDVIVEESDLLTQEEKLPYQCTVCSQLFAMRHNLEAHMVKKHSGNEEPSKPPRSTAKLKQPKTEPLDVFEEFTQEISVIYHCTECWENFASEEDFNNHTHEARIILTEDLPDNAIISEVIESS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -