Canc059074.1
Basic Information
- Insect
- Conomelus anceps
- Gene Symbol
- -
- Assembly
- GCA_948455865.1
- Location
- OX418225.1:30787751-30791423[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 8 0.00068 0.33 13.9 0.3 2 23 775 796 774 796 0.96 2 8 2.6e-06 0.0013 21.5 1.0 1 23 802 825 802 825 0.97 3 8 6.6e-05 0.032 17.0 1.4 1 23 832 855 832 855 0.97 4 8 6.4e-06 0.0031 20.2 1.0 1 23 861 883 861 883 0.98 5 8 4.5e-06 0.0022 20.7 0.2 1 23 889 911 889 911 0.97 6 8 7.2e-05 0.035 16.9 1.7 1 23 917 940 917 940 0.97 7 8 9.4e-05 0.046 16.6 3.5 1 19 946 964 946 968 0.95 8 8 2e-07 9.9e-05 24.9 0.1 1 23 974 996 974 996 0.98
Sequence Information
- Coding Sequence
- ATGTTAATTAGAAATTTTCATCTCTTCCAGGTTGACTCTCCTGGAGATTATAATGGTGCTACATCAATATCCAGCTTAAATTTAGTTCAGCAGCCTCAAAAATGTCTCATACTGAAACCGATTACCTCAAACTTAACTTCAAAAACTGATTTGAAGTATTCTTTGATCAGGTCATTTACTCCATCAAGAAGGACTTTTTCGAATGTGCCTATGAGAAGTAATAATGAAACAGAGACGATTGCCCAGAAAATACCAGTCAGTTTGCCAAAAATAATCGTAGATGTTGCAAAGCCAAAAAATAATTTCAATAGTTCAACAAATTCCATATTAAGTGCTGAAACAGATCGTTCAACTGTTTTTCCAGTGAAGCAATTTCCACCTCATGTTCAGAATGTTATTGGTGGATTGATGAATAGCAGAAATGGAAATACGTCTTCTTATAAGCCACTTGTTGTGGAAACATCACAGTTTCAGAACAAAATTTCACAAAATAATGTGAACTCAAACTATGAAGACCACTCGTTTGTGAAACCAGCACAAAACTTGCCAACCTGGCCTGCAAACATAAATTGGAATAATAATAATAATCTTTGTCAACCTATTATATCTGATTACTTGAATAATGTACAACCCATGAGAGCTAATTACCCATTGAATGCCCAACTCTGCAAATCCCAAAATATTGTAGTTGGGCCATCAAATTCTACATGGAAAGGCAATCCTATTGGATCTGTTACAACATCTGGTTGGTTAAGTAATGCAGACACTCAAAAATTGTCAAATCTTGGGACTTGGTCTACAAATAATGTTAATAATTTTGGTGAATACTCAAACACTTATAACTGGGGTAATGCTGTAAGACTTCTGGGACCTACACATGGAGTTACAAATAGTTTTCACCCAAATTTCACGCCATCAAAGCCAAATAAAGTAGTTCCCACTATAACAGGTACAAAAATTATTCCTAATTTTAATCCAAATAAAACAAGGCCTAATTACTTTTCTGGGTATGTAAATGGACAGAATGTAGGTGGTGCAGGGTCTAATTCAACAGTTGTAGGAAGCACTGATAGTAGAAAAAATATTATCTCATCACCATTTAACAGTGGGTTTGTGGCAGAACCAAGTGTTGTCAATAATGGTTTCTCATCGAACTCAAATATTGACCAAATTCAAGGTACCACTGACTCCAAGAACAACATTTTTATTTCTCCAATGTCATATAATAATGCAAAAATTGAGAATAAGCCAAATTTTACCAGAAATTCTACACCTAATTTGAAGATTGAAGAAGGTTTTGATGGTAAGAAAATTATGTCATTAGCATTTGATAACATGAATGATGAACTCAATAACATGAACCAACCCACAGTGAGCTCGAGTAATGATAGTGCAAATAAAGACAACATCATCACAGTATCTGAGAACAATGTGAGATATTCGGAGAAACCCAATATTATCAACAATACTACTCTCTATTCAAAAGTTTTTGAAAATATTGAAAGTGGAAACATTCTCACTACATCTACGGCTTATAATAGAGGAGGGCCCATGTATAAGTCAACTGTCATTAATAATAATGATATAGACTTCAAGGTAGTAGAAAATATTGACACTAAGTATAATATTATCACATCATCCACAACGACATCGTATGATAATAATTGTGAAAGTATATTGCCGATCAATAGTGATGAGGAAGAATTGTTAAATACCCCAGACTGTGCTTTTGATGATTCATTCACTCTTGAAGTGCCAAATGCATCTCGTACAGATGTGTTTGAAGATTACAATACTAGTAGTATTGATTCTCATCAAGCTTTGGGAAACAATAATAGTGTGATTCAGGCTACATCCACTTTGAAATTTAATGAATCTTTGCCTTTTCTTGAAGAAAATGGATTTCTAGTTAAAGAGGAGAATAATAATGTTCAAAAAAATATTGGTGGAAGTAATATAAGTACCAGTGGTTTGGAAAATGCTATACTCCCTGATTACCAGGAAGATCTATCGTTTGTGTTCTTGGAGGATGAGCCCAAGTTTTCTGTTGGAAATTTGGGGAGTTGTGAGGAAAAAGATGAGGAATTTGATTTGGATAGTTTAATTGAGAAGAATGAGCAGTTTTCCATTGATGTTATGAAAAAAGGGGAGATAATGATAGAAAAAAGTGATAAACAAATAGATGGGGATAAATCTTGTGATAAAATCATTAAAGGAAAAGATTTTGGAAAAAAGATTAAAAATGGTAAGGAAACAACTGAGGGAGATTTTGACGCATTGTGTTCAAAAATGGCTGGTGAAGATGAGGAACAAGTTTTGCTTCCCTGTGGGCTTTGTGAAATGATGTTTCAAAATAAACTTAGTCTTAAAGTACATTTGAGAACACATTCAAAAGAGAACGATTATGTTTGTGAGGTTTGCGGCAGGAGTTTCAAACAGGAAACAACATTGAAAAATCATTACCTGAGGTCACACACATATGACAACAAGACGCACAAGTGCAATGTTTGTGAACAATCGTTTGATTTCTGGAGCATGTTGAAGGAACATAGGGAGACAGTTCATCCATCCAATGATAAACATCAATGTTACATATGTGAGAAGGTTTTCCCCAATAAGACGGCACTAAAGGCTCATGTACAACGCCATACAGATCCTCGACGTTATAAATGTCAGTACTGTGACAAAGTCTACAAAGACCGAGCCGGTTTGAATGTGCACCTAGTAGTACACACCCAAGTTTCCAAATTTTCTTGCACTCTTTGCGATCGCAAGTTTGGGAAAAAAAATCTTCTCACTGACCATATGAAAATTTTCCACCTGAAACAAAAAGATCACACATGTCATGAATGCAATAGAGCTTTCAGCACTAAAAACACACTGAAACGTCATTCTTGGATACACACTGGAGAGAAGAATTACATTTGCGAGATATGTGGACGGCCATTCAGACAAAAAGTTGCATTGACAGTGCACATGAAAGTGCATAACAAGCCGCCAAAATTTCAAAATGCATTTGGTAGCAGTAATGGTTTGATAAATTTGTGCAATAATAACAATTTTGTAAGTCAACCTGTATGCAACGTTTTCAAATTTCAAAATGAGAATGTTGAATCAAAAAACGATGCATCATTCAGGAGAGATAGAAAATCACTTAGAAAGAGAAGTTTCTCAAGATTATTAATAATTTTCATAGAAAGATGCAATAGAGGTAACTCTGATAGTTCCCAACATATGAGAGCATGGACGTAG
- Protein Sequence
- MLIRNFHLFQVDSPGDYNGATSISSLNLVQQPQKCLILKPITSNLTSKTDLKYSLIRSFTPSRRTFSNVPMRSNNETETIAQKIPVSLPKIIVDVAKPKNNFNSSTNSILSAETDRSTVFPVKQFPPHVQNVIGGLMNSRNGNTSSYKPLVVETSQFQNKISQNNVNSNYEDHSFVKPAQNLPTWPANINWNNNNNLCQPIISDYLNNVQPMRANYPLNAQLCKSQNIVVGPSNSTWKGNPIGSVTTSGWLSNADTQKLSNLGTWSTNNVNNFGEYSNTYNWGNAVRLLGPTHGVTNSFHPNFTPSKPNKVVPTITGTKIIPNFNPNKTRPNYFSGYVNGQNVGGAGSNSTVVGSTDSRKNIISSPFNSGFVAEPSVVNNGFSSNSNIDQIQGTTDSKNNIFISPMSYNNAKIENKPNFTRNSTPNLKIEEGFDGKKIMSLAFDNMNDELNNMNQPTVSSSNDSANKDNIITVSENNVRYSEKPNIINNTTLYSKVFENIESGNILTTSTAYNRGGPMYKSTVINNNDIDFKVVENIDTKYNIITSSTTTSYDNNCESILPINSDEEELLNTPDCAFDDSFTLEVPNASRTDVFEDYNTSSIDSHQALGNNNSVIQATSTLKFNESLPFLEENGFLVKEENNNVQKNIGGSNISTSGLENAILPDYQEDLSFVFLEDEPKFSVGNLGSCEEKDEEFDLDSLIEKNEQFSIDVMKKGEIMIEKSDKQIDGDKSCDKIIKGKDFGKKIKNGKETTEGDFDALCSKMAGEDEEQVLLPCGLCEMMFQNKLSLKVHLRTHSKENDYVCEVCGRSFKQETTLKNHYLRSHTYDNKTHKCNVCEQSFDFWSMLKEHRETVHPSNDKHQCYICEKVFPNKTALKAHVQRHTDPRRYKCQYCDKVYKDRAGLNVHLVVHTQVSKFSCTLCDRKFGKKNLLTDHMKIFHLKQKDHTCHECNRAFSTKNTLKRHSWIHTGEKNYICEICGRPFRQKVALTVHMKVHNKPPKFQNAFGSSNGLINLCNNNNFVSQPVCNVFKFQNENVESKNDASFRRDRKSLRKRSFSRLLIIFIERCNRGNSDSSQHMRAWT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -