Basic Information

Gene Symbol
-
Assembly
GCA_948455865.1
Location
OX418219.1:56114919-56122599[+]

Transcription Factor Domain

TF Family
zf-BED
Domain
zf-BED domain
PFAM
PF02892
TF Group
Zinc-Coordinating Group
Description
The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 19 2e-08 5.5e-05 25.5 0.2 2 43 552 590 551 591 0.95
2 19 0.3 8.1e+02 2.5 0.8 6 43 642 679 640 680 0.81
3 19 0.014 38 6.8 2.5 2 43 702 742 701 743 0.83
4 19 9.9e-09 2.7e-05 26.5 2.6 3 43 828 867 826 868 0.93
5 19 0.0052 14 8.2 1.8 3 38 917 951 915 956 0.86
6 19 4.9e-08 0.00013 24.3 1.9 4 43 1022 1060 1021 1061 0.93
7 19 5e-05 0.14 14.6 0.6 5 43 1114 1151 1111 1153 0.93
8 19 0.0081 22 7.6 0.7 6 43 1251 1288 1249 1289 0.86
9 19 0.0011 3 10.3 2.0 8 44 1330 1363 1328 1363 0.89
10 19 0.004 11 8.6 1.8 16 44 1400 1429 1388 1429 0.90
11 19 0.025 68 6.0 1.6 3 29 1442 1466 1441 1484 0.82
12 19 0.19 5.2e+02 3.2 3.6 7 30 1499 1522 1497 1527 0.85
13 19 0.57 1.5e+03 1.7 0.8 14 29 1591 1606 1583 1612 0.83
14 19 1.7e-07 0.00047 22.5 1.0 2 43 1668 1708 1667 1709 0.97
15 19 4.5e-09 1.2e-05 27.6 0.3 2 44 1739 1781 1738 1781 0.93
16 19 4.6e-06 0.013 17.9 0.1 3 43 1817 1861 1816 1862 0.93
17 19 1.5e-10 4.1e-07 32.3 0.1 1 44 1965 2008 1965 2008 0.97
18 19 0.00037 1 11.8 0.7 2 43 2079 2120 2078 2121 0.82
19 19 1e-05 0.027 16.9 0.0 3 44 2341 2381 2339 2381 0.93

Sequence Information

Coding Sequence
ATGATAACCACCATCGCTGTGCTCCACTGTGCAAATACCCTAACAAAATTATATATTGTTTTTAACATGCAGTTAAGTTTGACAAAAAGAGGGTCAATTCATATTGACACTAATAGCGAACCCATGTCTGAACAGTCAATGACCAAACTTTACATTTTATATCACACTGGAATTGACTATGAAGAATGGGATAAAGAAGAAGACTATGCTGTTCAGTGCATCTTAATCATGGAGCAAAACAATTTGGAGTCACCAGACATTGTGCTAGCAAGTGGTAGCTTGACCACAAATGTTGGGGATGAAGGAAGCACAACCTCCACTCAACTTCTAGATGAAGGTAATTCGAATTCTCAGACTGAGCCAGAGGCCAATCTAAATAGACAGGATGACAACAAGAATATCAACTCTCCAACTGTTACTTCAGCACGTGATGGTGATGAAAGTCCACCATCGTGTTCCCAACTTAATATTGACAAGGAAAACGATGCAGAACAACAGCAGAATAGTTTAAATTCACAAGACAGTTCAATAAACATTCCTGGTGTGACCTCGACCACGGTTTCTGCAGATGGGAAAATAAATCACAACATTAATCCAATAAATGATGAAAATTCAGGCGAAATGCCTGTTTCTCTTCAAGAATCAGATAATGTTCTTGATGAATTTTTAACTTTAAAATTTCCTTATAAAAGCTCTTCAAACACGACTGATGATAATGCAGAAGCCCAAAATATCGACGATCCAAATGTTCAAGGAACTAGTGAAAATGCAGGAAGGAGTTCGGTTTCTGATTCAGATAATGCTGCTGAAAAGAAAAAAATGAACAAATTAAATAGGTCTGTAGGGGATTTTTTGTTTGATGATGGTCAAACTAAAAAGTCACCACCCAGAAACAATAGTGATGAGAAATCTAATAAGGATAAATGCGATCCACCTTGTAGTAAAGAAAGTGAAAATGTCTCTGCAAAAGATCCAAGTGTGGCAAATACTGTGGAGCAAGATCTTGCTTCATTGTTTTCTGACTCAGATACAGTTGAAAAAAGTGAAAATTTCTTAACAAAGGATGCAAATAAATCTGATGATTTGGGAAATGAAAAAGCAGACTCTTCTGCTACAGATACCAGAGCAAAGATCGAAGATGCCGATTCAAACAAATCCATTGATTCAAATGATCTTCACACAAAAGGAATCTTACCTGGTGAGGAAACTGCAAAAGAAATTACTAGCAAAGATTCTGTAAGAAATGAAAACCTTCAAATCAAAGATGCAGAAGGAAAAGTTCGTGAATTACAAAGAACACTAGATGGCGAAGAAACTACTGTCGGCCCCAAAAAGAACTCTAATCTTCCAGTTGAAAGCAATTTCACCTTGGATAGAATTGAAATTAAAGAAGAAATTGAATCCATTGAGAATGATAATTCACAAGGGTTTGAAAATTATCTCAGATCCAATGATGAAAGTAACATTTCATGTTCTTCAGATATGCAGCTGCAGAAAGGTATAACTGATATAGATTATTGCAAAACAGAGTGTTATGTTGTTCTTGAACGGTGTGACGAATCGCTCTTGAATGGAACTGATCACTATCAATCTGACATGAAAATAGTTTCTGTTGAATCTCTGTCATCTATGAATTTCACAGAAAAATATAATGTAGTATGGTCATATTTCACTAAAAAGTCACCCTTACTAGCAGAATGTAAGATTTGTGGTCGAGCCTTATTGTATCGGAAATTGTATAATCTTACTCGACACTTGCAAACAGTCCATGATCATAATTCGTCTACTACAAACACTGACTTGGATACATCAATGCCCCGAAGCCATCTTAAACCAGCTGCCACATCAATAAAAAATACACGATCCATTGCTTCTTTCAAGCTAGTTAATGACCCTGTCATAATTGAAGAAAATCCCATGCATTTCTTTCAAACTGTTAACTCAAAAACGGCCCAGTGTAAATTGTGCTTTCAATATATGCCATACAGATGTTTGGATGATCTTGGCAGTTTGAAGTCACACTTAATTGATAAACACACAAAAACTACTTCAGCTGCAAAAATGGTCGGTAACTTTGACAGCAGCATCATTGAGAAATCTGCCAAAATCTGGGTTTATTTCAATCAGCTAACATCAAGTACTTGTGTTTGCAAGATTTGCTCTCTCACTATCCGCTTCAACAGTAACTATTTTGACAAACTTCTTAATCACATATATTTAAAGCATTCTAAAAATTTCAACCAACAATTCACGTCGGTGCAAGAATTTGCAGAAGCTCTAGTAAATGACAAATTATATTTAATTTCAGAATCTCAAAGAAAAAATTCAACAAAAGATGACAAGACCTTTTTTAGAGACAGCAGTTCAGATGAACAACAGGAAGAAGATGAGGATAGTGATGATAATGATGACGACTACGAAGATGAATCCAATGAAGAATTGTCTGCTAAAAGTAATAGTGAAAGAAAGCCACGACAGCGTACTTGGTCACATTTTACCAAACTGGAAAGAGGCTTGGCACAATGTAATGTTTGCCATAAGTGCTTCTCATATGGTGGAGGAAATTTACGAAGCCTGACAAGGCATTTGAAAATTGGACATGAAGAACAGAAATCTGCAAATCAATCGAAACAGAAGACAGCCCCACAACAAGCAAAATTACTTGCTAAAGTGCCGAAGAAAGAACAGAACTCACAAGCTACTTCTAAGAATTCAAAGCTCACAAGACAACCACCGGCTGGAAAACAATTTTTGAAATATTTCTCATTTCTCAGATCCAACAATGCCTTGTGCAAGAAATGCATGACCAAAATACCTTTCAATAAACAGGACACAAAAAGTTTGCTCAATCATTATAACACATGCAATCCTGAATCAGATTCTCCAAAAAAGAGCGTTTCCAAAAAAAGAAGAACTGGAGAAAGTGTCGTTGATAGAGATGGAAGCATCAAGGACCCTGATTTTGTGTCTTCTAATTTTGTTGAAGATTGTTCTGATCCAAACAAGCACAAAACAGAATTGATGGCTGCTGTAGAATTGTCCCCTAAAGAAAAGCCACTTGATTGGAATCATTTCAAAAAGCTAAATGGTACTATGGTACAGTGCTTACACTGTTCAAAAAGACTCTCCTATAAAAGTGGTGACACGTGGCTATTAGAGCAGCACCTACAGCTGTGGCATGATATAAAGGGTCTTAACAAAAGTAAGAACGATGATGGATTTGATGCCAGCTTGGATGATATTCCTCTACTTTTCAGGCTCAAGAATCAGTCTCAGCCTTACACTTTAGGTGACTGCTACTATCGCAAGAAACTTCAATACAATATCATTGAAATTGGAAGGTATTTTAGAAGGTTAGTTGATGGTAAACTGGTGTGTAAGTTGTGCTCGAAACATCTGCAGTGTAATGATACTTCAACTGAAATATTGATGTCTCATATTCTACAGGAACATGTCAGAAAACTTTTTAAACCTAGACAGAATTCTAATGAAACAAATACCACACAGACAAAGCAAACGTTAGTATCATCATCACCATTTAAGGCAACTTCACCTCAAATAAAATCAACTGCAATGAAAACGTCTCCATTAGACATGCGAAAGGTCCAGGGGCAGTCTACTCCACTCCCTCAAAGGAATCGGCGCTTGGAGTTGCAAAGAGTCAATACTCCCAAATCTGCATTGTCCCAACTTAATGTCAATATGAACAACAAGGCGCCTTTTTTACCAAAGTTTGATTTCACTATGAGATATTTCACTGACTTTGGTCCCAACAGCCAGCAATGTAAGATATGCAATAGACACTTTTTTGGTAAAAAATCATTGAATTCCTTGCTTCTCTCTAAACATTTACTTTCTAATCATTTGAAAAATGTTGTAGATGATGAAACTGCTGTTGATGAAAAATTATTATCATTGAAACCTGAGGTAACTGAACAGAGAAAAGCAATTATAAACTGTACTAGACAAAGGATTGTCAATAAATTTTCAGAAATTAATGATCTAAAAATATCGTGTAAAATGTGTTCTTGTCACCTCCAGAATGATGGCTTTGATACTATGAAATCCCATTTATTGAAGAATCACCAAAACTATCTTATCACTATTTTAAAAGAAGTCAAAAGAATCCAGAACTACTATTGTACAAATTTGAGAAAAACTAAGAGATTACTGTCTTTTCGTAAAAAACGTATTTTGCGAGCCAAATGTTCTTTTTGCTCCCGTGAAGTTTGTTATAAAGCTGGCAATACCAAACTCCTCTTCACTCATCTATTGAAATTCCATCGAAAAGCTCTTGGTAAAATCCCAATTTCAAAACTCACTGTCTGGAAATACTTCTCAAAACAGAAATTTTCAGGAAGCAAGTGTGAAATTTGTTTCAAGTTCATCTCATCGAAAATTCATTGCAATCACAAAGTTCCAAAATTGTTTTCCTTATCAACTGGGCTGAAATTGAAACCAAAAAAAGAATCAAGTTCGTACAAGACTTCTTGTTTTTACTTTTCTACATTGAAACAGTATAATTCTGAATGCATATTCTGTTCAAAATCACTAAAAAGTGCGAATAAAATAATTTGTAAAATTGCTTGTCGTTTCAATCATGGAAATGAATACATCAATTGGCTATATAAAAATGATCCTGTGGATCAGTCTTTTGTTACAGCCAGTCAAACTGATGGAACTGTGCAGAAGACGCTTTCTCTTTTAGAAATGTTTGATGAACTCAAGAATAAGAAAATAAATTCCATCAAGCTGTTTTATTCTGAATTTTCAAATAAGTACCATTGCAATCTTTGCTCTGAGAATATAACTGCAAAATATCTAAGATTTTGTTTGTATTTTGAGCATGCATTTGAAAAACACAAAGGTCTGCTGAGTATGCACAGAACTTTTATAAAACCTCTAAATCAGTTCAATGACTGTGCAAGGCCTCAAAGCATAATGCAATCAACTAATTCAGCCCTGCAAAGTACGCAAAGAAATACAAAATTGGTCAAAGTGAAACTATGGCATCACTTTAAAGTGGTTGGCCCAGACATGGCCAGTTGCAGTTTTTGTAAAACAAATTTTCGATACACGTCTACAAATGTTGATAATCTATCCAACCATCTACGTGTAGCCCATCTAAATGATCTTTTGAAACTAAATGAAGCGGCTATTAAGTCTCAACAACCACAATCTCCTCTGACTACTAATGCAAGAGCGAAAAAGAGTAGCACTTGGAATTACTTCACAGAGAGTGGTGAAAGAGGAGCTAAATGCAAGCTGTGTGGAAAACAGTTTCTTTTTAGCAAGAGAAGGCAAGTGAGTCCTCTGACTCGACACCTGCAGACTGTTCACAAAATCACACCTACCCAGGAAGGAATGGATGAGTCTAAGACCGAAATGAACGAGGCATTGAAACCTGACAATGAAAAACTCAATACCAAAGATGAACAGACAAAATGGGTATGGCAGTATTTTGAAAAAGATGATAAACGACCTGGAGCAGCAAGATGTAAACTATGCTCAATTCATTACAGCATTTCACAAGAGCAGGGTGATCTGTTTCCAGCTCTGCACAGACACCTTCGTCTTGTTCATAACAAGTGGCTGGTAAATGTTGGAAATAATCCACTGCAAAACAATCAAGGATCAAAAAGACAAGCCGAACCTGGCAAGGAAGCCAGTCCTCTTGCTGGCCAAGCTCCGAAGAGAGTCAAGTTCAATGATTCAGTTGATGCGGACAGTGCTAGTCACATGGATGATGAAAGTACTAATACCGCAGATACTCCACTAACACTGAAAAAAGTACCAACCCCTTCCAAAAATGGAGGAACTGAAGTTACTGGCCAGGGAGCTAAGAAATCGCTCCTACGTTTTCAAGAACTAGAAAAATCAAAGAGCAAAAAGAGCTTGGTTTGGACTTATTTCACACCAATTGATGGCCAGCCAGATTTTTCAAGGTGTAATATCTGTTCAAAAAGTATTTCCAGTAAATTTGGTATAAGCATTTTACGTACTCATTTGCGTGTGAAGCATAATATATTGATCGTCAACATGAATCAATACTCTGAACTGAAGAAATCCATTGGTGATACCAGCTTAAATAATGATATACTTAAAGACGGCTCTGGCATGAAAACAAATGTGGAGCAAACTGTTAGTCCTACCAAAGTCAGTATGGATGCGAATAGTCCTGCTTCGAGTAAAGCGACTGTTAATTCACCCTGGTGCAAATTTGATAAGAATCATCCGGTATGGTCGTACTTTAAAGAAGAGAAAGATAGTAATCTATTGAGATGCAATCTTTGCTCAGTATACCTATCATGCAAACGTGAACGACCTGGGGATCTTCAAAATCATTTGAGTGCAAAGCATAACATTGTATTTGTAGAAGCTGATCCATTGAAGAAAGTAAGCAAGGTATCTGGAATTAGAAGTGCGTCAGAGCAGGGATTGTCCACTAATCAAACAGTTGAAAAGAGTGGTAAGGAATCTATTAAGAAACTTCTTCAGGAATTCCCAAAATCTACTGAAGAACTACATAAAACAAAATCTACAGAAGAACTACATAAAACAAAATCTACAGAAGAACTACATAAAACAAAATCTACAGAAGAACTACATAAAACAAAATCTACAGAAGAACTACATAAAATAACTAATGTTGAAGAACCAGTTGTTGAGAACGAAGTGTTTTATACTACCGAAGATAATTTGGTTACTGTTACTGAAAGAGGGGACCCAAGCTGCGATGAAACAGTTCACTATGAAATTGTGGAAACCACTCACTATACGGGACAAGAATCTACCGACATTGTTAAAGTGATTAATAATCTCTTACCAAGTTACAGTACTGGCATTTCCGAAGATGTGGAAGCAACAGAAATATCTCCACAAGAATCCGAGTTGATTTCTAACATAGTTACTTCACTATCAAATCCTGAAGGCCAGGCTTCCGCCAGTCAAGAAATTATTGATGATGACCAATTGAAAAGCATTGCTGTTCTAACAGGAGAAACTGAAGATACTTCCTTAACGTGGGATTTCTATGTCAAACTCGGTGATAATAAAGTGAAATGTGATGTCTGTTCGGAAGTTCTCACCTATGAAAGTAATGATGCCGACCATTTAACCGACCATATCCAGTCGAAACATCCTGCCGAACTGGCTCAGTACAAACTTTCTAGATTAGGTTTCAATGACTCTTGTATAATAGTTGTGAAAAATGCAAACTAA
Protein Sequence
MITTIAVLHCANTLTKLYIVFNMQLSLTKRGSIHIDTNSEPMSEQSMTKLYILYHTGIDYEEWDKEEDYAVQCILIMEQNNLESPDIVLASGSLTTNVGDEGSTTSTQLLDEGNSNSQTEPEANLNRQDDNKNINSPTVTSARDGDESPPSCSQLNIDKENDAEQQQNSLNSQDSSINIPGVTSTTVSADGKINHNINPINDENSGEMPVSLQESDNVLDEFLTLKFPYKSSSNTTDDNAEAQNIDDPNVQGTSENAGRSSVSDSDNAAEKKKMNKLNRSVGDFLFDDGQTKKSPPRNNSDEKSNKDKCDPPCSKESENVSAKDPSVANTVEQDLASLFSDSDTVEKSENFLTKDANKSDDLGNEKADSSATDTRAKIEDADSNKSIDSNDLHTKGILPGEETAKEITSKDSVRNENLQIKDAEGKVRELQRTLDGEETTVGPKKNSNLPVESNFTLDRIEIKEEIESIENDNSQGFENYLRSNDESNISCSSDMQLQKGITDIDYCKTECYVVLERCDESLLNGTDHYQSDMKIVSVESLSSMNFTEKYNVVWSYFTKKSPLLAECKICGRALLYRKLYNLTRHLQTVHDHNSSTTNTDLDTSMPRSHLKPAATSIKNTRSIASFKLVNDPVIIEENPMHFFQTVNSKTAQCKLCFQYMPYRCLDDLGSLKSHLIDKHTKTTSAAKMVGNFDSSIIEKSAKIWVYFNQLTSSTCVCKICSLTIRFNSNYFDKLLNHIYLKHSKNFNQQFTSVQEFAEALVNDKLYLISESQRKNSTKDDKTFFRDSSSDEQQEEDEDSDDNDDDYEDESNEELSAKSNSERKPRQRTWSHFTKLERGLAQCNVCHKCFSYGGGNLRSLTRHLKIGHEEQKSANQSKQKTAPQQAKLLAKVPKKEQNSQATSKNSKLTRQPPAGKQFLKYFSFLRSNNALCKKCMTKIPFNKQDTKSLLNHYNTCNPESDSPKKSVSKKRRTGESVVDRDGSIKDPDFVSSNFVEDCSDPNKHKTELMAAVELSPKEKPLDWNHFKKLNGTMVQCLHCSKRLSYKSGDTWLLEQHLQLWHDIKGLNKSKNDDGFDASLDDIPLLFRLKNQSQPYTLGDCYYRKKLQYNIIEIGRYFRRLVDGKLVCKLCSKHLQCNDTSTEILMSHILQEHVRKLFKPRQNSNETNTTQTKQTLVSSSPFKATSPQIKSTAMKTSPLDMRKVQGQSTPLPQRNRRLELQRVNTPKSALSQLNVNMNNKAPFLPKFDFTMRYFTDFGPNSQQCKICNRHFFGKKSLNSLLLSKHLLSNHLKNVVDDETAVDEKLLSLKPEVTEQRKAIINCTRQRIVNKFSEINDLKISCKMCSCHLQNDGFDTMKSHLLKNHQNYLITILKEVKRIQNYYCTNLRKTKRLLSFRKKRILRAKCSFCSREVCYKAGNTKLLFTHLLKFHRKALGKIPISKLTVWKYFSKQKFSGSKCEICFKFISSKIHCNHKVPKLFSLSTGLKLKPKKESSSYKTSCFYFSTLKQYNSECIFCSKSLKSANKIICKIACRFNHGNEYINWLYKNDPVDQSFVTASQTDGTVQKTLSLLEMFDELKNKKINSIKLFYSEFSNKYHCNLCSENITAKYLRFCLYFEHAFEKHKGLLSMHRTFIKPLNQFNDCARPQSIMQSTNSALQSTQRNTKLVKVKLWHHFKVVGPDMASCSFCKTNFRYTSTNVDNLSNHLRVAHLNDLLKLNEAAIKSQQPQSPLTTNARAKKSSTWNYFTESGERGAKCKLCGKQFLFSKRRQVSPLTRHLQTVHKITPTQEGMDESKTEMNEALKPDNEKLNTKDEQTKWVWQYFEKDDKRPGAARCKLCSIHYSISQEQGDLFPALHRHLRLVHNKWLVNVGNNPLQNNQGSKRQAEPGKEASPLAGQAPKRVKFNDSVDADSASHMDDESTNTADTPLTLKKVPTPSKNGGTEVTGQGAKKSLLRFQELEKSKSKKSLVWTYFTPIDGQPDFSRCNICSKSISSKFGISILRTHLRVKHNILIVNMNQYSELKKSIGDTSLNNDILKDGSGMKTNVEQTVSPTKVSMDANSPASSKATVNSPWCKFDKNHPVWSYFKEEKDSNLLRCNLCSVYLSCKRERPGDLQNHLSAKHNIVFVEADPLKKVSKVSGIRSASEQGLSTNQTVEKSGKESIKKLLQEFPKSTEELHKTKSTEELHKTKSTEELHKTKSTEELHKTKSTEELHKITNVEEPVVENEVFYTTEDNLVTVTERGDPSCDETVHYEIVETTHYTGQESTDIVKVINNLLPSYSTGISEDVEATEISPQESELISNIVTSLSNPEGQASASQEIIDDDQLKSIAVLTGETEDTSLTWDFYVKLGDNKVKCDVCSEVLTYESNDADHLTDHIQSKHPAELAQYKLSRLGFNDSCIIVVKNAN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-