Basic Information

Gene Symbol
-
Assembly
GCA_948455865.1
Location
OX418219.1:56101559-56108393[+]

Transcription Factor Domain

TF Family
zf-BED
Domain
zf-BED domain
PFAM
PF02892
TF Group
Zinc-Coordinating Group
Description
The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 15 3.6e-12 9.8e-09 37.5 2.9 1 44 97 139 97 139 0.97
2 15 1.8e-10 4.8e-07 32.1 0.6 1 44 212 254 212 254 0.97
3 15 5.1e-06 0.014 17.8 0.0 4 44 312 351 309 351 0.93
4 15 1.7e-05 0.047 16.1 0.3 6 44 397 433 396 433 0.94
5 15 2.8e-06 0.0077 18.6 0.7 9 44 508 543 499 543 0.88
6 15 0.00081 2.2 10.8 0.2 2 43 586 627 585 628 0.94
7 15 4e-11 1.1e-07 34.1 0.9 1 44 685 729 685 729 0.97
8 15 0.22 5.8e+02 3.0 6.9 4 44 756 791 754 791 0.86
9 15 0.013 35 6.9 0.7 15 43 822 849 814 850 0.84
10 15 0.15 4.2e+02 3.5 2.5 15 29 907 921 900 927 0.79
11 15 5.5e-08 0.00015 24.1 1.9 3 44 1211 1249 1209 1249 0.96
12 15 3.2e-07 0.00086 21.7 2.3 1 42 1278 1318 1278 1319 0.96
13 15 1.2e-14 3.2e-11 45.5 0.3 1 44 1345 1387 1345 1387 0.97
14 15 7.3e-10 2e-06 30.1 2.9 1 43 1500 1542 1500 1543 0.95
15 15 9.5e-09 2.6e-05 26.5 0.2 3 40 1582 1618 1580 1626 0.95

Sequence Information

Coding Sequence
ATGACGTCATTAAGAGCAGTCAAACGCAAATCAGGGTTTGTGAATCGTTCAATAGTTCATGAAGAGAGTAATTCCATGGAAGATATTAATTTAGTTGAAAATGATTCTTCTTATGAGATTCCATTAGATGAAGAAGTTGATGAAACAATTTCTTCTTCATCACATGGTAAAACGGGAGTTGAAGAACAGCAAGAAGGGTCAGAAGATAAATTACTAAAAAGGTCAGAAGAAAAACTACAAAAAACTTCGGAAGAAGAAAAACTGGAAAAGTCAGAAAAAGAGAAAAGGAGTCAAATTTGGAACTATTTCGAGTTGATCTCAAACAATAAGTACCAGTGTATTTTGTGCTCTGAAAAATTGAATTATCTTGGTGATAGCACTTCCAACTTTTGCAGACATATGCGTAGAAAACATAGTTTAGAGTCTCGTTCATTATTCTCCAGAAAAACGACTCCGGAAGAATTAATTAATTGTCATGGATACAATAGAACTGACAAGGAAGATCTTTCATATGAGATTCCATCTGGTGCTGGCTTTGATGAAACGAATTCAACTTCTTGTGGTGGAGCTGGAGTAGAAGAACAGAAAGAAAAGTTGGGAAACCAACGAGTAAGGTCGAAGAAACAAAAATGTAGTGAAATTTGGAGCTATTTCAAGTTGGTTTTAAAAAATAAGTATGAGTGCATTTTGTGCTCTGGGAGATTGAACTATATTGGTGGTAGCTCTTCCAACTTTTATAGACACATGCGTACAAAACATCCTGCTGAGCCTATTTCATCATATCCTAAAAAAACAACACAGAAAGTTATAATTGATTGTTATGGAGACAGTGGGACCGAAACAGATGATGCTGTCGAGGAGAGGGTGGAAAACAAATGTCCAAAGGAAACAAGATCACAAGTTAATGAAACCAGTTACGATGCTAGTCAGCCATGGAGATTCTTTGATATACTTTCAGGAAATGCAGCTTGTAGGCTTTGTTTTCGATCTCTAAGTTACCGTTCAATAGCCGATTTAGCTGTGCTGGTGAACCATCTTAAATCAAAGCATTCTATTTCTTTCTATAAAAATGATTCAGCTGGTTTGTTAGAAGTCGTTAACAGTGAGGAAAGTTGTTCAACAGACTTTGGTAGCAAAGACAGAGCTTCTCCTGATGGTGTTGGAAAAATACAAAGAAAATTTGAAATCTATTTCACAGATTTTGATGATAAGTCGGCAACTTGTAACATGTGTTTGAGTTCAGTATCGTTTACACAAAACAAAAAATCACTCATTTCTCATCTCTACAGGGAACATAAGAACTTTTTTTCGAAAAGGTATCCTACATTTTGGCATTTTTCAAAGTGTTTCAATCAGAAAACGTCAACAACTGTCTCGTACGTGGACAATTCCACCACTAACAGCAAAACATTTTATACTGATCATTCAGAGAGTGGAGAACGATTTTCTGTCCAACAGGAAATGGATTCTGAATCAGACATGAAACACACCATGTCTTATCCTGATAATATTACAGCTCAATTCATGAAGCTTGATAAAAACCGAGGAAAGTGTAAATTTTGTTCAAAATGCATATCATACAAAGGAAATGTAAATATTCTTGAACAGCATATCTATAATGAGCATAGAAAAGCTTTCATACAAAAGATTTTGGATGAGATGGTGTTTTGTGACGAAAATATTAATAGAAAAGCAACAAGTCTGCGTTTAATGGATAAATCTTCTCAAGGTGGGCAGCAAAATTCGTCGAACGAAAATCTATTGTCCTACTTTAAACCACTTGAAAACCTCCAGTTCAAATGTAAAATCTGCTTCAAATTATTGAGTCTGGAAAATTATGAAAGTTTTAATCGATTATATGAACATGTTTGGAATGCACACATGAGTAAAATATTCAAATCAATAGTATGTCTCCGGTCATTTGGCAGCTTAGAATTGAATCAAGAAAAAAGTAATCCAAATAATAAAACTCCTGGTGCTTTCAACAGAAAAAAGAAGCCTCACAATATAAATCTGGATTCAATAAAATGGGTGAGACCACGGGGGAAATCCAGTAAATCATGGAAATACTTCCTAATACCAAATTCTGAATTACCATTGGCTAAATGTAGATTGTGTAACCATATTCTCTCAATTAAGTCGGCAAACATAAGTAATTTAGCCCGTCATTTGAACCTTAAACACAGTGATCAACTCCGGAGAAATTTGAACATGTGTTATGAAAACGCTCGCATGTTTTGCAAGGACAGTAAAATGAAAATTGTCAAGAAGTATTTGATGAGAGAAATTCGTAAATCATTGCAATGCCGATTATGCTTTGCGCATTTCTCCGAACGGAAATCTCTCTGTAAACATATTCAGTGTAAGCATAAAAACTACGATTACAGTAAAGAAATTCGCAATTCCAAAACAGTCTTTCTAAAGAAAGTGTGTGCCTCAAAAGTTATCTCGAATAAGAAAATACGATTTGTAAAATGCAAACTTTGTGAGAAATATTTTCCTTATTCCAGAAGGGAAATATTAGAAAAACACATGAAGGAGAAGCATACCAATGCTTATAATATGGGAGTGATATTTGAACAATACAAAGGATGTGGGAAGAAAATATTGACTGTAAATGATGAAATGGATGTCATTATAGAAACATCGCCAAGCAATCTTGAAGTAGAATTGAAAGATAATTCCTATTTGGGTACTTTTTATATCAAATCTGGATCCAGTTATGCAAAATGCAAAATTTGTCGGAAATTTATTTCTAAAAGTATACATTGCCGTCATAAAATACCATCAATTTTCTCCCTTTCGTTTGGTGTTCAGTCCATGAAAATGTCGAAGAAGTTGATTACTTCAGGCAGGGAATCAGATTTTAGAAAGATTTATTGTTGTTCCTTGAACTTGGTCAAGAATTACTGCGATATTTGTTTAAAGAACCCCACTAGCTCAATTTGTCGCTGCAACGTAAACCAGCAATTTACCCTACCACCATTGATCAATATATCAGCAGAAAATGCAGATGTCTTGAGCACTCACTATCTCCAGGATATCCCTAGATCTGAGAGAAAAGCCTATGCAATATTGTTCTCCATTAATTACTTTGAAAAATCGTGCTGTCTGTTGTGCTCTGAGAAAATATTTTCTCAGGGGTCCAACTTACTGTCATGTTTTGATCATTTTCGGTTAAAACATGGAACATTAATAAAAAATTTAAATACTATGACCAAATCGATAGAAAGAAGAAAATTGTTTGATAATGTTGATTATGAAGGATTTCTCAATTTCAATCCATTTGGCTTGAAGGATACCGGCAAACAATGTTCAATTGAATCAGACGTTATTAGTGAACAACCGTCAAATATCTTGAACTTAGCTAGTGAAAATCTCCAATCAGAATTGCACGTATATAGTGAAAATCCCACATCAAGCTTCAACGTTGTTGGTGAAACTCATTCTTCAGTCTTGGCCATTGCTAATGAAAATTTGTGCTTAGATGTTGCTAATAAAAATTTGGGCTTAGATGTTGCTAATGAAAATTTGGGTTTAGATGTTGCTAATGCTACCCCTGTATCTGAAATTGAAAGAATTCCTGAAAAATTGAAATCCTTTGTTAGAAAGCGTCGTTACACAAGTTGCATATGGAAGTTCTTCACGAAAGTTGGTCTAAAGGCAGCTGTTTGTAATGCATGTCAACGTGTCTGGAAGTTTTCAAGCGTGTACAACTTGGCAAGACACTTGAAGAACAAACATCCGAGACTTGCTCAATTATTGCAACATGAACGAGCTAAGAAATACTTACCAATAAGCGGCACTATAAATAGTGCTGTTGACAGAACAAGTAAAATATGGATGTATTATAAAAAGTTGAATAATGGTTGGGCTGAATGTAACAAATGTAAACGTTATATTTCATTGAAGAGTGGATCCATTGGCAGCTTAAAAAGGCATTTGCAATCCAAGAATTGTATTGATAAAGAATCTGACAAAGAAGTGTTGTGTCGCTTAACAGATTCGGCTATAGAGACTAGAAAAAATACGAGCAGCGTTTGGCGATACTTTCAAAAATCACCTCCTGATAAAGCAGTTTGTAGCATATGCCAAAAAGAGATATCTATCAAGAACAACAACATCAGCAATCTAGCACGACATCTACGAAGTATTCATAGAGTGTATATTATCCCATCTTCTTATATTAATGTTCATGCTCAAGTTCTAGCTCTCCAAGATGCTCCTGATAATTCAACACGTCTGAGCTATGAGTATATTGTAGATGAACAGTTGAACAATTCAGACGTTACTGATAAAGACTCTCAAACTATCATTACAAACGCTGTAATTGAATCTGCCAACTCTGGTGAAAACTTCCTACTTGAAGAAACATTTCCGCCTTTTATCGCAGAAGAAGTTGTAGGCGCTCTTGATCCAATTCAGAGAAACGACTCTATTGAAGATAATATCCCTGAAACAATTAATCTGGATACATTTTGTAAAAAAAACAATCGAAGTCCATCGTGGAAATATTTTACTAAACTTGCCAATGGTCGAGTTGAATGTATGCTATGTTATAAAACTTTATCCTTTAAAAGTAACAAATGTATTAATAACTTGACACGTCATCTGAAGTTGAAACATGCTTCGGTTGTTGAATCCAAGACCGAGGAGGATAACGAGAAGTGTATTATATTCCTGCATGATACTAAAACTGAACATCCTGATACGAGTCAGTATAACAAAGAAAAAACTAGTTATCTTTGGAAATATTTTAGTAAATCCGAAAGTGGCATAGTTACATGTGAACTTTGTCTAGAAAATGTATCTTTCAAGTCACATGATATTCGAAATTTGCGGCGACATCTCGAAGGACTTACTGGTTTGCTTAACAGGGCTGCTAATGACTAA
Protein Sequence
MTSLRAVKRKSGFVNRSIVHEESNSMEDINLVENDSSYEIPLDEEVDETISSSSHGKTGVEEQQEGSEDKLLKRSEEKLQKTSEEEKLEKSEKEKRSQIWNYFELISNNKYQCILCSEKLNYLGDSTSNFCRHMRRKHSLESRSLFSRKTTPEELINCHGYNRTDKEDLSYEIPSGAGFDETNSTSCGGAGVEEQKEKLGNQRVRSKKQKCSEIWSYFKLVLKNKYECILCSGRLNYIGGSSSNFYRHMRTKHPAEPISSYPKKTTQKVIIDCYGDSGTETDDAVEERVENKCPKETRSQVNETSYDASQPWRFFDILSGNAACRLCFRSLSYRSIADLAVLVNHLKSKHSISFYKNDSAGLLEVVNSEESCSTDFGSKDRASPDGVGKIQRKFEIYFTDFDDKSATCNMCLSSVSFTQNKKSLISHLYREHKNFFSKRYPTFWHFSKCFNQKTSTTVSYVDNSTTNSKTFYTDHSESGERFSVQQEMDSESDMKHTMSYPDNITAQFMKLDKNRGKCKFCSKCISYKGNVNILEQHIYNEHRKAFIQKILDEMVFCDENINRKATSLRLMDKSSQGGQQNSSNENLLSYFKPLENLQFKCKICFKLLSLENYESFNRLYEHVWNAHMSKIFKSIVCLRSFGSLELNQEKSNPNNKTPGAFNRKKKPHNINLDSIKWVRPRGKSSKSWKYFLIPNSELPLAKCRLCNHILSIKSANISNLARHLNLKHSDQLRRNLNMCYENARMFCKDSKMKIVKKYLMREIRKSLQCRLCFAHFSERKSLCKHIQCKHKNYDYSKEIRNSKTVFLKKVCASKVISNKKIRFVKCKLCEKYFPYSRREILEKHMKEKHTNAYNMGVIFEQYKGCGKKILTVNDEMDVIIETSPSNLEVELKDNSYLGTFYIKSGSSYAKCKICRKFISKSIHCRHKIPSIFSLSFGVQSMKMSKKLITSGRESDFRKIYCCSLNLVKNYCDICLKNPTSSICRCNVNQQFTLPPLINISAENADVLSTHYLQDIPRSERKAYAILFSINYFEKSCCLLCSEKIFSQGSNLLSCFDHFRLKHGTLIKNLNTMTKSIERRKLFDNVDYEGFLNFNPFGLKDTGKQCSIESDVISEQPSNILNLASENLQSELHVYSENPTSSFNVVGETHSSVLAIANENLCLDVANKNLGLDVANENLGLDVANATPVSEIERIPEKLKSFVRKRRYTSCIWKFFTKVGLKAAVCNACQRVWKFSSVYNLARHLKNKHPRLAQLLQHERAKKYLPISGTINSAVDRTSKIWMYYKKLNNGWAECNKCKRYISLKSGSIGSLKRHLQSKNCIDKESDKEVLCRLTDSAIETRKNTSSVWRYFQKSPPDKAVCSICQKEISIKNNNISNLARHLRSIHRVYIIPSSYINVHAQVLALQDAPDNSTRLSYEYIVDEQLNNSDVTDKDSQTIITNAVIESANSGENFLLEETFPPFIAEEVVGALDPIQRNDSIEDNIPETINLDTFCKKNNRSPSWKYFTKLANGRVECMLCYKTLSFKSNKCINNLTRHLKLKHASVVESKTEEDNEKCIIFLHDTKTEHPDTSQYNKEKTSYLWKYFSKSESGIVTCELCLENVSFKSHDIRNLRRHLEGLTGLLNRAAND

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-