Basic Information

Gene Symbol
pol
Assembly
GCA_948455865.1
Location
OX418221.1:36809076-36818479[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1e-05 0.047 16.2 0.0 2 41 138 180 137 184 0.89
2 2 3.3e-07 0.0015 21.0 0.0 3 43 687 730 686 732 0.90

Sequence Information

Coding Sequence
ATGACTTCTCCAGCATGCAGCCCTTATGGGGAAAATAGGGATACAGCTGTTATTAGGGTACCTGCAAGACCACATTGCATGAAATGCACACGACAATGTGATAAGATGGGTGGTGATAATGGGTTATTGACGCACATAAGGAGGATGCACATTGGTCTCAAAGTTATATTTCAGTGTTCCAAATGCGAGTCAACTAGGTTTCCAACTTATAATTCAGTCACCGCACATTTGGCAAAATGTAAGGGACCGCGATCTTCACCAATGCTCAACGTGGCATGTTCAGTAAGGGGATGTGATAAGAAATTTGTGACCGCACATGGGCTTAAACAACACATGCGGCAGGCACATACTGACATGTATGGAAAGATACCTCGGGGACACATACGAACAACATCACAATATGCAAGGACGGGAACCTGGACTACGGCTGAAGTTGATATCTTACGGCAGTACCTAAATAGAAATGGGAAAAAGCATGGGTTTGCAAGTGAAATTAATAAGCTTATACCTACCAAAACTGCCAAGCAGATATATGACCGGGTGCGACGGCTATGCCCTGAGAGTGATAGTGATGCTGCAGTGACCATTTCAGACGTTGAGGAAGTTTCTGGGGCTGATTGCGAAGATGACCATGATGAATCTGTAAAAGGGGAGGACGATGTACCTGAAAAGAAAGAGGAAAACATGATTAATGACATGTATAAAAGTGATAGTGATTGTAATGAGGGGGATGGAGATGACAATGGTGATGAGGGGGGTGAGTTTGTGGATGGATGTGATGATGTTGTAAGTAAATGTAGTGCTGATATAAGTGTAAATGAATGTATAAGTGTTAGTGATGACGATATTCCAATCTCAATTGAGAAGAACCAAATTACGGATATGACAAAATGTGACAATGACATTAAACAATCAGTGGAGGATAATACAGTGGCAAGAGGTTATGGTTTGAGAGTGTCTGGCAGGGATTTGGAAACACTGCGTGGGGATGGTTGGCTCAATGATGTGATCATCAATTACTATTTGGCAATGATTGGGGAGTGCATAACCGGGTCATATGGGAGGAAGATATATGTGCATAGCACCTTTTTCTATCCAGTGTATCGGCAGGGCGGCTATGAGGCAGTGCAACGATGGACCAAGGGTGGTGAAGTGTTTGAGTGTGACTTTATGCTGGTGCCAATCCATGAACAAAATCATTGGAGCCTGGTGGTGGTGGATGTGGTACAGCGAAGGATAGAGTACTTTGACAGCTTGTACAAGGATAGGAATGGATGCCTGGATAACATTTTGTCATACATTACTGCTGAAAGTAATGACAAGCAGGTGGGAATCCGGGATTCAGTGGACTGGACAAGACAGGTGATGCAGAACCTTCCTGGACAGCAAAATGGCAATGACTGTGGAGTTTTTGTGTGCTGGTATGCACGCTTTCGGTGCTTGGAGCAGTCTTTCCCGTTCAGCCAGAGTGACATTGGTGACCTAAGAGTGCAGATGATGGAGGAGATTCAGCTAGGAAAGTTGATAGGAGTTCAAAGGAGGGTGCATCGAGTCAGGGAAAGTGTTGAACGAATTGAAAAGCTTTCATCCCCAGTGAATAGTGAGTATATCTCTCCAGAGAAGATTACAGCTGGTTCAAATGAGACTGACACTTCACCTGCTAGATTGCTCTTGGATCGGGGGCATGTGGTGGGTTTGGTGAGAGTAAGTCTGCCATATGAGACCTCTGAGTGTGTGGGGTGTGAGCGAGTGTTTATCAGTGCTGGGGGGAGTGTGGGGCTGGTGACTCATTTGAAGAAACAACACCCGCGGCTAGCAGTGGAATACCACTGCAGGATGTGTGACAGTGTCACATTTGCATCATACCATGCGGTCTCCTGCCACATACCGAAGTGCACTGGCCCTAAGGATGTGGTAGGTGACTTTGTATGTGAGGAGCGGGGCTGTGGGGATGTGTTCCAGACCACAAGAGGATTGTCACAGCATATTCGGCATATGCACCCGGCAAGAAGGAACCAGATAATCTTGGAAAGGATGAATGGCGCAAGGTCGGTAGAACATTGGACATCGGATGAGGTTGACACTCTGAAGGAATACTTGAGTACCCATGGACAAATGCGTGGATATGCAAAGGAGGTGGCTGAGTTGATTCCTGGTAAAACTGCACGACAGGTCAGAGAGCGGGCCAGGAGGTTCAGCAACAACCCACTCTTTCCATTGTTTAGTGGGGGAACATCTAATGACAGTGACCAGGAGAAGTATGAGGGTGAGGAAGGGGACAACAAAATTGATGGGACACCTACAGTAGTACGTAGAATAGTGAGAAGTGTGAGTGAACTTACCTCAGTTGGAAATGTAGATTCAGATTCCTCCCTGATGGCGGTGAACAGCGACTTCTCCAAAGACCTTGATGTGGTGTTTGGTGCAACTGTAGGAAAACCTGAAACAGAAGGCAAACAACACATCACACAAAGCAACGGCGAACTTGAAACAACAAGGAAGAGAATTGACGGAGAAGAGGACACAGTGGGTGAACATACCATGGTGCCATGTGATGTTGATGCGGTGTGTGATGTTGGCACAATGAATGGATCCCTAGGCCTTGTCCAATCGAAACCTGCAACAATAGAGAATACATTTAAATATTACAATGATAAGAACCTGAAACACAAAAACACAACAATAGAAACAAGTCAACAAACAAAAACACAAGAAGTAAATACAAATGACAAAATAGCTGAAATAGAACCAAATAAGATACAAATACAAATGGAGAATACATTCCAATATTACAATGATAAGAACCTGAAACACAAAAACACAACAATAGAAACAAGTCAACAAACAAAAGCACAAGAGGTGAATACAAATGACAAAATAGCTGAAATAGAACAAGATAAGACACAAATACAAGAAATAAACACAGTAAAAACAAAAGAAATAGATGAAATATATAATATGGATAGAAATATGAACACAATAGATGCAATAGTCACAAATAAGGCTGAAACAGTATATGACATTTTTAAGAACAGATCAAGAGGAACAAAAGCATTAGACACCAGCAAGGATACAGCAGAAAAATTAGTAAATACAAAAATAGTACCAGACATAACAATAGACAAAATAGATACAACATTAGATCAAATACATACAGCAAAAATAGATACACAAGACAGGTGGAGAGAGAATCAAGGTACAAACATTTGGGGAAATTGCCCAAATGAAGTGATGTTTCCAAGAGAAAGGACTGGAGAAGTTAGTGGGGATAGAAGTGGAGCACCAACATCTAGCAACTGGAGGACCTGCATGATTGATGGGGCAATGGGAGGCTTGGACAGGAAATGGAAACCGAAGTTTGCGGCACTCCTTGGCAAAGCTGAGAATACATTGCGGCGGCTTCAACATGGAATGAACTTGGAAGTGCGCGAATTTGAGGAACTGGTAAATTCAGCCCACAGTATGATGACTGAACAGCGAGGACCATTACGAGCGGGAAAGCCTAGGAGAAGAATGAATGCCAACAATGACCCAGTGAAGCTGCGCAACATTGGTAAGCGAAGGGAATATGCTCGAACCCAGGAGCTGTATCATCAAAACCCCAGGCGATTGGCAGATTTAGTTGTTGAGGATGATTTTTCACTCCTCCATGATGATGCTGCTGATGCAGGGAGAGACAACAAACAACCATTGGAAGAACTGTACAAAATGTACAGTGAGCTGTGGGGGAAAGTAGCAAAATGTGAGATGTCCACAGACCTCCAAGGTGAAGAACACAATATAAATGATGTTCTGACTGCATTTAGTGAGAAGGAGATTCTTGACCGTGTCAAGAGAATGAAGAAGGGTGGGGCACCGGGACCTGATGGAGTGACTAGGACAGGTGTTCTGAAGTGCTTTGGCAGTCAACTTCTCCTCACAAAGATCTTTGCAGCTGTTACCCTGAGTGGGTATGTTCCTCAATCATGGAAGAAAAATCGCACAATTTTTATACCCAAGCCTAAGAAAGATCTGGCTAGGCCTGACTCATGGAGGCCTCTTACTATAGGATCATTGATCTATAGAATCTATGCAGGACTACTAGAGAAGCGCATCAGGAAAGTGGCTAAAATAGATGTGCGACAGCGAGGATTCCAGCCAGGCCAGGGCTGCCAAATCAACTGTGCAGCCTTGGACTGTGCACTTCGGGTAGGCAGAGGTGGACGTCCAGTGTGTGGGGCCATATTAGATATGTGTAAGGCCTTTGATATGATTCCGCACCAGGCAATTATGGATGCTTTAGTGGGTAAGGGTATGCCGGCAGAACTTGTGATGCTGATGGAGAGGATCTACCAGGGAGGAACTACTACAATAGGTAGGGGTGGAAGAGAGCTCCCATTGCAAagaggtgtgaaacagggagatccgttgtctgccctcctgttcaacttggtaattgatGGTGTTTTTGGAGTGGCACAGGGGGATACAGAGGGCGAATGTGCCCTAGGCTACGCTGATGATATCATTCTTTTAAATGAGTCCATCGAGGCACTACAGGCACAACTGGGGGCGGTTGAGGCTTTTATGTCCAGTGTTGGCCTCCAGCTAAATGCATCAAAGTGCCGCGTTTTCAGCATAGGCCAATACAAGAGGCAATATATCGTTGAAGCGCCGGAAATTCGTCTCAGCAATGGCAGGGTCCTGACTCCTCTGAATGCTGATGAGAGGTTCACATATCTTGGTGTACAGTTTACTTTGGCAGAGGGGATGGATACAGCTGGAAATGTTGAGGCAATGATAAGGGCTGCTGAGCGGGTGCGTGTACTCAAATTGAAACCACGACAGAGACTTGACCTCCTCTTTACTTATATCACACCGCGATATTACCATTCACTAAGTATAGGTGAGGCAAGTGTGGCCACATTGAGGATGGCAGACACCAAGTTGCGACAAATTGTGAAGGACTTCCTACACCTACATCGGATGACACCGGATTCATTATTTTATTCTAGGAAGCGTGATGGGGGATTAGGACTTCCGCGGCTGGTGAATCAGATATCATTGGGAGGAGTTCGTGCAGCTTGGCAATTGCGTCGACTGAGTCACCCACCATTCGAATACTTCAAGAGCTTGGATAAACGGGGGTGGAAGAATGTGCAGCACAGAATGGAGGCACTACAGATGAAAGCAAATCAGGAGCCTAAGTTTGCGGATTATGAAAGGATCAAGCAACACTTCAAGAACACTGAAATTGAAAGATGGTGCGAACTGGGACCAACTGGTCATGGTGCGAAGAGTTTCCACAATTCAAGAGAGAGCAATATATGGTTGTATTATGACAATATTCTGAAAGATACAACCTATATCAATGCTCTCAAACTGCGGACAAATACGTTGGGCACAAATGAGGCTCTCAGGAGGGAGGATCAAGCAAGGCCTGTGATGTGCAGACGATGCAAGCGTGAACCTGAGACACTGGGCCATATCTCAGGACATTGTCCCTGGGGTAGGGCACAACGGATTCGTCGACATGACAACATCAAGGAAAAACTAGTGCGCACTATCCAGAGGATGAATAAAGATATGAGGGTTGGTGTTGAACAGAGCTTTATGTCAGATGATGGTGAACGATTGCGACCAGATATTGTGGTCAGTGGTGGTGGCAATACATATATAGTGGATGTCACAGTAAGAGAGGAAAATGGAGCCTCACTACTTAATGCAGCCAAGGAGAAAGAGATAAAATATGAGGCAATCAGGAGGGTAGTTGGTGAGAGTTTTAAGACAACTGTAGCTACAGTGTTGCCTATTGTGATAGGTGCGAGAGGAGCGATGCCACCAAGAACGCTGGAAGCCTTAAAAAGGCTTAGCATCGACAATAGGAGAGGGCTAAGTGCTATGGCGCTTGATGCAATGACATCTACTCTTAAGCTGACACTTGACCACATAGACATCGGTACCCGTGCTAAAATGAGACACGAAAAACCGTTACCACGGGAGTTGGGAGCCCCCTTCCTGCTTACCCCAGCAGGAGGGCCCAACAGGGAGTTGGCAGAAAGCCGCTCTTGGTGTAGGAATCAAAAGAAGACAAAGAAATGGAAAGTCTATTACCCTAAGAAAAGGGAAAGAAACAGGCATGCCTGTCAATTCATtagccaaatgcctcgtcatctaattagtgacgcgcatgaatggattaacgagattctcactgtccctatctactcagggaactgGCGCATTGATGTAGTTCAGCGGGCCAACCAGGCCCTCGATGCTGTATCCCTGTGGTGCACATCGATGCGGCTACGTTGTAGCGTTGAAAAATGTCAGATCATGAGTTTGCGTGGTGCAGCGTCATGTGCTCATCGGATCTTACTTGACGGCGCATACCTTCGGTATGTCAATCCAGTTACCTATCTTGGATTCGAGATAGGGGAGGATCTGTGCTTCGGCCCGATGGTCATGAAACTTGCTGACAGGGTGACCAGCTCGTTTTCGCGGGTCACATCTGTTGTCCGGCGTGATTGCGGACTCCGTGGTTCTATCGTACGAACCATCTATCGAGGTGTGTGTGAGTCAATCATGACCTACGGGGCCTCCATCTGGGCCCCCGTTGTCCGCCCCAGGCTGTTTGGGACACTTTCGGCGGCTCAGCGCACCTGTCTTCGTGCGGTCACACGTGCGTATCGCACAGCGGGTGTTGAGTCGCTACAGGTGATAGCTGGAGTCTTCCCCGCCCGTGTGCTTTGTGACCTCCGAGCCAGGACGTTCCAAGCAACATCTGAGGTTCGGCGGGATGCACACCGGGAGGCTCTGGCATCCTGGCAGACTTTGTGGGCGACTTCACGGCGTGGCCGGACTACTCATGGGTTCTTCCCGGATGTGACTCGACGCATGGCAGTCCCATTCTTTGACTGGTCACATTACAGTGTACAGTTCCTCACGGGCCATGGCAATTTTAAATCACTTTTGTACAAGTGGGGAAAGGCCTTCTCTCCTCACTGCGATACCTGTGGTGAGCTTGAGACCTCTTCTCATGTTCTGCTTGAGTGCCCCGGCACACTAGCAGAAAGAGAATCCTTCCAGGACCAGTATCGCGAGTTGGGTTGTGTCTGGACTCAGGAGTGCATGGTGTGCAGTGCAGCGGCATGCAAGTTGTTTGTTGAGTACTGTAATTGTCTTGGAAGCACTCCACCTGGGTATGCTGACTCTAAGGGCCCTAAGGCCTAG
Protein Sequence
MTSPACSPYGENRDTAVIRVPARPHCMKCTRQCDKMGGDNGLLTHIRRMHIGLKVIFQCSKCESTRFPTYNSVTAHLAKCKGPRSSPMLNVACSVRGCDKKFVTAHGLKQHMRQAHTDMYGKIPRGHIRTTSQYARTGTWTTAEVDILRQYLNRNGKKHGFASEINKLIPTKTAKQIYDRVRRLCPESDSDAAVTISDVEEVSGADCEDDHDESVKGEDDVPEKKEENMINDMYKSDSDCNEGDGDDNGDEGGEFVDGCDDVVSKCSADISVNECISVSDDDIPISIEKNQITDMTKCDNDIKQSVEDNTVARGYGLRVSGRDLETLRGDGWLNDVIINYYLAMIGECITGSYGRKIYVHSTFFYPVYRQGGYEAVQRWTKGGEVFECDFMLVPIHEQNHWSLVVVDVVQRRIEYFDSLYKDRNGCLDNILSYITAESNDKQVGIRDSVDWTRQVMQNLPGQQNGNDCGVFVCWYARFRCLEQSFPFSQSDIGDLRVQMMEEIQLGKLIGVQRRVHRVRESVERIEKLSSPVNSEYISPEKITAGSNETDTSPARLLLDRGHVVGLVRVSLPYETSECVGCERVFISAGGSVGLVTHLKKQHPRLAVEYHCRMCDSVTFASYHAVSCHIPKCTGPKDVVGDFVCEERGCGDVFQTTRGLSQHIRHMHPARRNQIILERMNGARSVEHWTSDEVDTLKEYLSTHGQMRGYAKEVAELIPGKTARQVRERARRFSNNPLFPLFSGGTSNDSDQEKYEGEEGDNKIDGTPTVVRRIVRSVSELTSVGNVDSDSSLMAVNSDFSKDLDVVFGATVGKPETEGKQHITQSNGELETTRKRIDGEEDTVGEHTMVPCDVDAVCDVGTMNGSLGLVQSKPATIENTFKYYNDKNLKHKNTTIETSQQTKTQEVNTNDKIAEIEPNKIQIQMENTFQYYNDKNLKHKNTTIETSQQTKAQEVNTNDKIAEIEQDKTQIQEINTVKTKEIDEIYNMDRNMNTIDAIVTNKAETVYDIFKNRSRGTKALDTSKDTAEKLVNTKIVPDITIDKIDTTLDQIHTAKIDTQDRWRENQGTNIWGNCPNEVMFPRERTGEVSGDRSGAPTSSNWRTCMIDGAMGGLDRKWKPKFAALLGKAENTLRRLQHGMNLEVREFEELVNSAHSMMTEQRGPLRAGKPRRRMNANNDPVKLRNIGKRREYARTQELYHQNPRRLADLVVEDDFSLLHDDAADAGRDNKQPLEELYKMYSELWGKVAKCEMSTDLQGEEHNINDVLTAFSEKEILDRVKRMKKGGAPGPDGVTRTGVLKCFGSQLLLTKIFAAVTLSGYVPQSWKKNRTIFIPKPKKDLARPDSWRPLTIGSLIYRIYAGLLEKRIRKVAKIDVRQRGFQPGQGCQINCAALDCALRVGRGGRPVCGAILDMCKAFDMIPHQAIMDALVGKGMPAELVMLMERIYQGGTTTIGRGGRELPLQRGVKQGDPLSALLFNLVIDGVFGVAQGDTEGECALGYADDIILLNESIEALQAQLGAVEAFMSSVGLQLNASKCRVFSIGQYKRQYIVEAPEIRLSNGRVLTPLNADERFTYLGVQFTLAEGMDTAGNVEAMIRAAERVRVLKLKPRQRLDLLFTYITPRYYHSLSIGEASVATLRMADTKLRQIVKDFLHLHRMTPDSLFYSRKRDGGLGLPRLVNQISLGGVRAAWQLRRLSHPPFEYFKSLDKRGWKNVQHRMEALQMKANQEPKFADYERIKQHFKNTEIERWCELGPTGHGAKSFHNSRESNIWLYYDNILKDTTYINALKLRTNTLGTNEALRREDQARPVMCRRCKREPETLGHISGHCPWGRAQRIRRHDNIKEKLVRTIQRMNKDMRVGVEQSFMSDDGERLRPDIVVSGGGNTYIVDVTVREENGASLLNAAKEKEIKYEAIRRVVGESFKTTVATVLPIVIGARGAMPPRTLEALKRLSIDNRRGLSAMALDAMTSTLKLTLDHIDIGTRAKMRHEKPLPRELGAPFLLTPAGGPNRELAESRSWCRNQKKTKKWKVYYPKKRERNRHACQFISQMPRHLISDAHEWINEILTVPIYSGNWRIDVVQRANQALDAVSLWCTSMRLRCSVEKCQIMSLRGAASCAHRILLDGAYLRYVNPVTYLGFEIGEDLCFGPMVMKLADRVTSSFSRVTSVVRRDCGLRGSIVRTIYRGVCESIMTYGASIWAPVVRPRLFGTLSAAQRTCLRAVTRAYRTAGVESLQVIAGVFPARVLCDLRARTFQATSEVRRDAHREALASWQTLWATSRRGRTTHGFFPDVTRRMAVPFFDWSHYSVQFLTGHGNFKSLLYKWGKAFSPHCDTCGELETSSHVLLECPGTLAERESFQDQYRELGCVWTQECMVCSAAACKLFVEYCNCLGSTPPGYADSKGPKA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00365730;
90% Identity
iTF_00365730;
80% Identity
-