Basic Information

Gene Symbol
SNAPC4
Assembly
GCA_948455865.1
Location
OX418216.1:94557857-94566328[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 6 0.0081 37 6.9 0.0 2 17 595 610 594 612 0.92
2 6 2.4 1.1e+04 -1.0 0.0 22 43 674 697 662 700 0.78
3 6 5.1e-12 2.3e-08 36.4 0.5 2 42 707 749 706 752 0.95
4 6 1.3e-10 6e-07 31.9 0.2 2 43 761 806 760 809 0.94
5 6 5.9e-12 2.7e-08 36.2 0.0 1 44 815 858 815 860 0.97
6 6 1.1e-16 5e-13 51.3 0.4 1 45 866 911 866 912 0.97

Sequence Information

Coding Sequence
ATGGTAAAAGGCTCGAATGAACCAGTGCAGGCTCACACCCGTTATTACCGATGTCATGATATAGATGGCACTGATATATTGATGGCACTCCATTGCTCTAACTATCTGTTCTTTCAGAAGAACCCTGAGGCCACCTTCCCACCCTGTCGCAGCTATCCGTCGGCCACTAGTGAAATAGCATGGAAACTTCATAGAGCCCTTCTCCTAAGGCCGTGGTCAGACTGCTTGCGACTGACGAGTAGATCGTTTTGCGAGCAGGTCGTACGATGGTCACATTGCAAACTTCCTACTCCTGCGAGTTTATACTTCAATGGCATTGACCAGTTGTTAGACAATCTGTTATTGCGCATTTTGTTTGTTAATGAAGAAAAAGAAAGCTGGGTGAATGATATTAATTTAACAATAGAGACGCAAGGAGAATTCCAGCTACTTTTTCCTGATATAAAAACTGATAGAAAAAATTTTCGATTATTTTTGGATGTCACCAGGAACGCCTTTTTTTGTAAACTAGCTCTTCACATTCGGTGCCTGCTACCGCAATGTGTTATCGGGATGCGTGCGCAGCTTGCTTTCGTCATATTGACTGTCTCTTGCTCCATTTCGTTCCATGAAGTCGACAGACTATCAGTGTACTGTGGGTCGTCTGACGATGCTCTAGACAACAGAGCGAAACGGCCGTCACGCCATAACTTCCAGGAGACAAGGTCGGAAGATTCAGCTGCTAAAATGGAGAGTGACGACAACAACTCTGGTGCTGCAAACTATTCAGATCCTAATATTGATATTAATGTGAGTATTCAAGAAAGTGTACCGAAGATGACTAGCGATGATGAAGATCTATTAGAAGAGAAAATGCTGAATGAGAAAATTAGAGCTGCAGAGGAGTTTGCTAGAGAACTCAAACTTCGAAACCGAACAAAAATGGATCTGAAATTTGTTTTAGATACTGAAAGTGCTTATGGCAATGAATCAGATGAGGTATTGGAAGGGAAATTGTTAGATGACAAGAACAGAGCTGCAGAGAAGTGTAGAAGAAAACGCAAACATCGAAACCAGACAAATATTGATCTGACATCAGATTTAGTTACTGCTACTACCGATGATGGAAATCGATCAGAAGATAAACTTCTGAATGAGAAGATCAGAGCTACAGAGCCTAGTAAGGAGATCGAACTTCAAAATACAACAAAAAATATTGTTCTGAAATCGGATTTAGGTACTGCAAGTGCCTACTATAATGATGAATCTTTAGAAGACCTGTTAGAAGAACAATTACTGAATGAAAGGATGAGAGCTGCAGAAGAGTTTGGAAGAGAACTAAAACTCCGAAACCGATCAGATATTAATTTTCAGTGTAATCCATCTGTTAGTGGTGTATGGAATTCAAAATCGGTTGAAGGTGATCTAGATGTTCATAAATTGTTAAACGATGATAGTAGAAAAAATTTATTTAATGAAAAAAGTAAAGACCAGCAATTGGATATAGTGAACAAAGCTTTGAGTTCAAACCTGTACAAGCAGGCTTTCTTGTCAAAGTGGGAGAAAAGTGTTGAAGAAGTATTGAAACAAAATCTTAATCTGCAAGACCGGGTGGTTAAAATAATGAAGCGGGGAAATAAAGATCAAACAAGAGTGGTGAGGCTATGGAATAATTATACTACTGCGGTATTTGGAATGTCTTATTTCAAAGAAAAAAACAAGAAAATGTCATGCCCACCGAATGCTGACACCAAACAACGAATTGAGAACGGTCATCCACTTACCCCAGATCCTTCCGACTCGGGCAAATGGACAAAAAAAGAGACTAATCTATTAAAACAAGGTGTGCAGTCCATTCTCACAGACAAAACCATAGCCAGTCTTAAAAGTCAAATAGATTGCATTGAAAACGCGAATAAGAAGAAGACTGCTCTATCTAAAGTAGGAAATCAGGTTGACAGACTAAATGAGAAAATAAAAAAGGTGAAAACAATGTCATTGAAAGAGCTGATGTCAGAACAGGACATAGATGATGATTATGATTGGAAGGTGATTTCGGTCAACACATTCAAAGGATTTCGCGACCCGGTTGAGTGTCAAAGCTATTTTAAGTTGTGCCTGGATCCCTTTCTGAATCATAACAGTTGGAGCAAGGAAGAGGATGAAAAATTAGCGGCTCTTGCTGAAAAGTACTCGTGTCAAGACTGGGATAAAATTGCAATTGAATTGGGGACGAATCGATCAGGGTATGAATGCTGTTTGCATTTTGAGAGGGAGATGGATAAAAATGTGAGGGCATCTGGTAAATGGACTGAAGAAGAAGATAATAGGCTGATAGAAGCTGTGAAAACGTTTAGAGTGGGAAACCACATACCATGGACTAAAATTTCATTTTCATTCACTCAGCGATCGGTGGCACAGCTGCGCGCGCGCTGGACCGAATCACTAGCTCCTCACCGAAAAAAGGGCAAATTCTCTCCTGAAGAAGATAAAATCATCTTTGAAACTATTGAAAAGCATGGATGTTCGTTTGGAGCTGTGGCATCCTTATTCCCAAACCGTACTGCACCTCAAATACGAGCGCGATTTCAAAGAAAAATGGAAAAGCTTCAGATTAGAGGTCACTGGACATTGGAAGAAGATAAATTACTAATGGAGCTAGTTGATAAAATAGGTATTCCAAAATGGAAGAAAATCAGTGAACACTTTATTACTAGAACACGGACACAAGTTAGGCAAAGGTATAATTCTATCAAAGATTTCTTGGAAAAGTATCCAACTCTTGGAATTGAAGACATCATTCGAAGGTCTAAAAAGTCAGGGAACAGTACCATGAAAACAGAACCCAAGAGTGAAACTACTGACACCAATAGTGCCATTATCAAGAGTGAAACTACAGATAAAGATAGCATACATAAAAATCTTCCCAGCGAAGAAAGAAATAAAAGAAAAAGAAAATCAACAGTCAGTGAAAGCTCGAGTCTAGATGGTGATAAACCAATAAAACAAATGAAAAAATCATGCAGCACTGATAATAGCAGTAGTCGGTTTGATAGCATATTGAAACTACTTAGGCGAAAACGTGAAGCAAAACCATTGTCACCGACAGGATTGAAGCTGATCAGTTACTTTCAAGAAACCTATCCAATGCAAGCACTTGTTGGCAAGAAAAATTGGGCTGAGACAGACATCTCATCCGAAGCACAAGTAATTTTCGACTTGAGTCATATTTTGAGAGTGGACTTCAGTTATATAGATGATTCAAGAAGACTTGGGTCTGTGTCGCCATTCATGCTCAGACAAACAGTGAAAAGGTTGATTGAGAATCACAGTGATAATCTTCTGAGATTGAATCCAGTGGATGCTGAATACAATTACACGTCTCTCCCTCCTCAAACGTGTCAAACCAACCCTGAAACAGATTTAATTGACGTTACCGATGCCACATCTCATATTGATTGTCCTCCTGTCCCAGTCGAAGATTCAATATGCTCTGACTTATTATTCCTAGATGATTCCATTTCTGAAGATCAGCATGCTCAATCTTCAAAGAACAATGTCTCTCAGTATCCAATTGAGAAAAATGAAATTGATTTTGATTTGGTTGAAAAGCAGAAAAGAGAATTCATGAAATTTCCATATCTTATACCACCAAATGTTGCAACAGCAGTTGGCTACAGATCTCTACTTCTCATTGAGCGGAAATTGAAAAATATAGCCAATGATGAGACATTAACACCTGACTACTCTTCGTACCAATTTCGAATGAAAGATGAAGACAAAGTACTCGCGAAAATTCCCACTAGAAATCAGTGCAATATGGAAAAATGTGTTCGGTTCACTAGAAACGAAGCAATTAATATGTTTAAAGAACGACTGAAAATTCTTTTTGCTGTTCCAATGGTAATGGGGGAATGTGCTGAACGATATTTTGATGCAAGTCACTTGCCAATTTACAGAAAAGATGTTGCTCTGAATAGAAATAAAAGACGTACTAATTCAACCCTTTATGAAGATTTACATAAATCCAAGTTGACTTGCACGTCGAACTCTAATCAAATTTCTGATGATGACTATGAATCTAGTATAGAGATAACAGATGATAGTTGCGGCGTATATTCCATGCCAAGTTTGGATGGTTGTCTGGCAAGTACTTCGTCCAGTATAGAAAACAATGACAGCTCTTCAAATATACCTGACAACTGCGATCCAAGTACTTCAAAAATTTTAGACAACTTCAAGCCTGGTACCTCTTTCAACTCATGGAAATTAAACTCATGGTTCTCTAAGAGAGCGCTCTGTTCCATTAATTGTCTCCGTTCGGAGTGGCTCTTGAGTACTCGTTCAGTGGAGCATCACCATCACCACCATCGTAGAATCAAACTCATTCTGTGTAATGTTGTGACAGTTTAG
Protein Sequence
MVKGSNEPVQAHTRYYRCHDIDGTDILMALHCSNYLFFQKNPEATFPPCRSYPSATSEIAWKLHRALLLRPWSDCLRLTSRSFCEQVVRWSHCKLPTPASLYFNGIDQLLDNLLLRILFVNEEKESWVNDINLTIETQGEFQLLFPDIKTDRKNFRLFLDVTRNAFFCKLALHIRCLLPQCVIGMRAQLAFVILTVSCSISFHEVDRLSVYCGSSDDALDNRAKRPSRHNFQETRSEDSAAKMESDDNNSGAANYSDPNIDINVSIQESVPKMTSDDEDLLEEKMLNEKIRAAEEFARELKLRNRTKMDLKFVLDTESAYGNESDEVLEGKLLDDKNRAAEKCRRKRKHRNQTNIDLTSDLVTATTDDGNRSEDKLLNEKIRATEPSKEIELQNTTKNIVLKSDLGTASAYYNDESLEDLLEEQLLNERMRAAEEFGRELKLRNRSDINFQCNPSVSGVWNSKSVEGDLDVHKLLNDDSRKNLFNEKSKDQQLDIVNKALSSNLYKQAFLSKWEKSVEEVLKQNLNLQDRVVKIMKRGNKDQTRVVRLWNNYTTAVFGMSYFKEKNKKMSCPPNADTKQRIENGHPLTPDPSDSGKWTKKETNLLKQGVQSILTDKTIASLKSQIDCIENANKKKTALSKVGNQVDRLNEKIKKVKTMSLKELMSEQDIDDDYDWKVISVNTFKGFRDPVECQSYFKLCLDPFLNHNSWSKEEDEKLAALAEKYSCQDWDKIAIELGTNRSGYECCLHFEREMDKNVRASGKWTEEEDNRLIEAVKTFRVGNHIPWTKISFSFTQRSVAQLRARWTESLAPHRKKGKFSPEEDKIIFETIEKHGCSFGAVASLFPNRTAPQIRARFQRKMEKLQIRGHWTLEEDKLLMELVDKIGIPKWKKISEHFITRTRTQVRQRYNSIKDFLEKYPTLGIEDIIRRSKKSGNSTMKTEPKSETTDTNSAIIKSETTDKDSIHKNLPSEERNKRKRKSTVSESSSLDGDKPIKQMKKSCSTDNSSSRFDSILKLLRRKREAKPLSPTGLKLISYFQETYPMQALVGKKNWAETDISSEAQVIFDLSHILRVDFSYIDDSRRLGSVSPFMLRQTVKRLIENHSDNLLRLNPVDAEYNYTSLPPQTCQTNPETDLIDVTDATSHIDCPPVPVEDSICSDLLFLDDSISEDQHAQSSKNNVSQYPIEKNEIDFDLVEKQKREFMKFPYLIPPNVATAVGYRSLLLIERKLKNIANDETLTPDYSSYQFRMKDEDKVLAKIPTRNQCNMEKCVRFTRNEAINMFKERLKILFAVPMVMGECAERYFDASHLPIYRKDVALNRNKRRTNSTLYEDLHKSKLTCTSNSNQISDDDYESSIEITDDSCGVYSMPSLDGCLASTSSSIENNDSSSNIPDNCDPSTSKILDNFKPGTSFNSWKLNSWFSKRALCSINCLRSEWLLSTRSVEHHHHHHRRIKLILCNVVTV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-