Canc023393.1
Basic Information
- Insect
- Conomelus anceps
- Gene Symbol
- -
- Assembly
- GCA_948455865.1
- Location
- OX418219.1:7445247-7447141[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.6e-08 4.7e-05 25.4 0.0 2 28 19 45 18 55 0.96
Sequence Information
- Coding Sequence
- ATGCCCAGATTTTATAAACGGCTTCCCGGAACAAAACCAAGAAAACTTATTAATAATGATGACTTGCAAAAAGCTGTTGATGAAGTTCAATCAGGAAAGCTAAATTACAGAAAAGCAGCAGAAAAGTATGGAATAGACAAAATGAAAATATTCCGAAAATGCAAGCAAATTCACCAGAATAAATGTGGTGGGCAAACTACTCTAACTGATAATGAGGAGGCAGTTCTAGCAGATAAGATCGTTTTGCTTgctgagtggggattcccattaactgcaatggatGGTATTGAAAATGTTGAATCTAATATTAAAAGTGGGTTCAAGAAAACTGGAATTATTCCAATTGATCGCCAGCAAATTCTGAATCAGCTTCCCAACAAAGGAGTGGATGCCAACCCAGTCGAAGTTGAAGAAAACATGGACGGTAGTGTAGTGGATTTACTTCGTGAGATGAGATATGGGAAGGAGAAACCAAGGCAAAGAACAGCTAGAAAAGACAAACTACAAGTTGAGCCAGGGAAAAGTATAAAAAATGTGTGTCAGAGTGAGTCAGAATCAGAGATTCTAGACGATGACAGTGAGGAAACCTCTGATGAAGAACCAGGTACAAATTCAGACTCTGAGGAAGATGAAGAACCTGCACCGGTACCGGTAGTAAATTTGAGAGAGGAACAAGAACCTCAAGTTGACTACATGTCTATAATGGAAGAAGAATTTTTAGTTATTAAGTTGAAGGACTCAATCACAAAGAGTGACAAATTATATGTGTCAAAGGTCTCATCCATAAATGAGAATTCTGCACGAACTACCAGAGTTGTAGAAGTGAAGTTTTTAAAGCTCTACAGAAACCATAGGGATATCTTTGTGTGGCCGGACATTGAGGAGTCAAGTGTAGTGTATCCTCATGAAATCTCACGGCGCCTGCCTCCTCCAGAAAATATTTGTTACGGACGATTGAAGTTTCCAGAAAATGTTGTTTGA
- Protein Sequence
- MPRFYKRLPGTKPRKLINNDDLQKAVDEVQSGKLNYRKAAEKYGIDKMKIFRKCKQIHQNKCGGQTTLTDNEEAVLADKIVLLAEWGFPLTAMDGIENVESNIKSGFKKTGIIPIDRQQILNQLPNKGVDANPVEVEENMDGSVVDLLREMRYGKEKPRQRTARKDKLQVEPGKSIKNVCQSESESEILDDDSEETSDEEPGTNSDSEEDEEPAPVPVVNLREEQEPQVDYMSIMEEEFLVIKLKDSITKSDKLYVSKVSSINENSARTTRVVEVKFLKLYRNHRDIFVWPDIEESSVVYPHEISRRLPPPENICYGRLKFPENVV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00365696;
- 90% Identity
- iTF_00365696;
- 80% Identity
- -