Basic Information

Insect: Conomelus anceps
Gene Symbol: -
Assembly: GCA_948455865.1
Location: OX418216.1:17996377-17998366[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 1.7e-07 9.1e-05 24.5 0.0 9 37 29 57 25 63 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	1.7e-07	9.1e-05	24.5	0.0	9	37	29	57	25	63	0.90

Sequence Information

Coding Sequence: ATGCCTAGACACCACAAACCAGCCCCAGGGACCAGGCAGTATGGTTCCAAGACGAGATATTCTGCTGAACTGTTGAACACCATTATTGAAGAAATAAGGCAAGGTAAGATTGGCCAAAGGGAAGCTTCCAGGAAATACAAAATACCAAGGCAAACTCTAGTGAATAGACTAACCAATAAACATTCTAATAATGTGGGAAGGCCAGTGATCTTCAGTGAAGAAGAGGAAGCTTCTTTTGCCTCACATTGTGTCTACTTGGGTAAAATGGGGATACCTATTAGTTTGCATGATCTGAGGCTCATTATCAAAAGTTATTTGGATGCTAAAAATAGATCAGTGAGCATATTCAAATCTAACATGCCTGGGTATGATTGGGGCAGAAGTTTTCTTCTACGACACAAATCTAAATTAAAAGAATGTTTTGCAAAAAACATTTCTCAAAAAAGAGCAGCAATTGATGAAGAAACAATTAGGAATTTTTTCATTCATTATGAAAATGAAGTCGAGGGAGTGCCATCAAAAAATATCTTCAACATGGATGAAACTGGCTTCCATGACATTCCATCTTCAAAGAAACTATTGTTTCCTCGAACACTACGTCACCCAGAAAAGGTTATGAATCAGACAAAGGCTTGCTACACGGGAGTCTTCTGTGGCAGTGCTGATGGCCAACTCCTTCCACCCTATTTTATTTTTAGTGGAAAACATAAGTGGGGTGACTGGATGATCAATGCTCCTCCAGGATCTAGAATGAATGTCACAGACAGTGGTTGGATGGAACACACAGTTATGGAAGACTGGCTGCAAAATTTGTTATTGCCATGGATTAGAAGTCAGAAATTATCTGGGAAAAAGATTCTCATGTGTGACAATCTTTCTGCTCACATAAGTTTGAACTCATTGAAAATATGTGAAGAAAATGGTATTTCTCTTATCACATTTCCAGCAAATGCAACTCATTTGCTGCAACCCCTGGACTTGAGTTACTTTGGCTCATTGAAATCGCACTGGAGAACAATTTTATCCGAGTGGCGAGCCACTCCTGACGGTAAAAAGAAAATAGCACTCCCAAAGAATACATTTGTAGCATTGGTCAAGGAAGCACTTGACTTGGGGAACCATAATGTGCAAGAGGTATTGAGAAAAGGTTTTGAGAAAAGTGGACTTTCCCCACTTAATAGCCAAGCAGTAATTGAAAAGCTACCACTTTATGCTAAAGCAGATATGGATGTGTCAAATGAAGTTGGGGAAGAATTTGTTAAATATGTGGAAGGTATCAGACAAAAAGATCTAGTACTGAAAAAAGTGGATAGATTGAAAATTCCTGTACAACCAGGTAAAAGTATATCTGCTGAAGAAGTGAAAAAATTTTATGAAAATAGAGAAAAAGAGAAGGAAATGAAGGGACAAGAGAGAGAAGAGAATAAGAAGAGATTAGAAGAGAAAAGGAAGGCTAGGGAGCAAGCAATTGTAAAAAGAATTGGGCCTAGAATGAGAGGAGGAATGCGAAGACATGGTGAAGGAATAAGAAGAGTTCTAATGAGAACTGATGATAATTTTGGCCAAGGTGATCAACCATCAACTTCATTCACATGTACATTCAAAGAAGACAAAGAAAATAATGAACTCTCATTTGATGCTTCTGTTTCAGAAATCTTTCTAGATGAATTAGTTATAGTTTCATATGACAATAAACTTTTCCCAGGGCAAATAACTGGTATAAATTTTGAAGTAGAAGGGGAAAAAACATATAAAATTAGTTGCATGTGCAAAAAAGGAAAATTTTGGGTTTGGCCTGACAAATCTGATGAGTGCATTTATGAGAGGGAGAAAATAATCAAGAAAATTGATGCAAATAATGTGAAGCTCATCAACAAAAGAGGCATGAATTTGAACATTATTGATTTAAGCTATTTTGATGGCTATAAGAGTTATTTTAAAACAAAATTGTAG
Protein Sequence: MPRHHKPAPGTRQYGSKTRYSAELLNTIIEEIRQGKIGQREASRKYKIPRQTLVNRLTNKHSNNVGRPVIFSEEEEASFASHCVYLGKMGIPISLHDLRLIIKSYLDAKNRSVSIFKSNMPGYDWGRSFLLRHKSKLKECFAKNISQKRAAIDEETIRNFFIHYENEVEGVPSKNIFNMDETGFHDIPSSKKLLFPRTLRHPEKVMNQTKACYTGVFCGSADGQLLPPYFIFSGKHKWGDWMINAPPGSRMNVTDSGWMEHTVMEDWLQNLLLPWIRSQKLSGKKILMCDNLSAHISLNSLKICEENGISLITFPANATHLLQPLDLSYFGSLKSHWRTILSEWRATPDGKKKIALPKNTFVALVKEALDLGNHNVQEVLRKGFEKSGLSPLNSQAVIEKLPLYAKADMDVSNEVGEEFVKYVEGIRQKDLVLKKVDRLKIPVQPGKSISAEEVKKFYENREKEKEMKGQEREENKKRLEEKRKAREQAIVKRIGPRMRGGMRRHGEGIRRVLMRTDDNFGQGDQPSTSFTCTFKEDKENNELSFDASVSEIFLDELVIVSYDNKLFPGQITGINFEVEGEKTYKISCMCKKGKFWVWPDKSDECIYEREKIIKKIDANNVKLINKRGMNLNIIDLSYFDGYKSYFKTKL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00365688;
90% Identity: iTF_00365688;
80% Identity: iTF_00365685; iTF_00365686;