Canc057945.1
Basic Information
- Insect
- Conomelus anceps
- Gene Symbol
- clz9
- Assembly
- GCA_948455865.1
- Location
- OX418225.1:17388600-17393621[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2e-08 1.1e-05 27.4 0.0 4 39 150 185 149 190 0.94
Sequence Information
- Coding Sequence
- ATGAGTAGTCTTTCAACCCGGGAAGGTGCGCCGTGCTCCGAGGATCCGACAGACGATGATGACAGCGAGCAGCGGGGGTGGGGAGGTCCAAGATGGCACCCCGACGCCCGTCCACTGTCCAGACTAGCCGTTGAATGCCTCGAGCCAGAACCAGACGAACCAGGACTGTCTCGGCCAGGACTCTGTCAACAAGCAATCACAATTATTAAGATAAAATATAGCAAAATATATATTAAAAAAAAAAATATCCAGGAAATTAACTGGTCACTACTTCCAGTAGATGTGGCCAGTGTGCAACTAAGCTTAGAAATTAACTTATACAAAAATAGTTTGAGTCTAGTCAGCATATATAGTACATATATACTGCCTGCAGCGCAACAGAATACAATGCCACGACCTAATCAGCCAACCTGTAATAAGAGAGTCTACAAGACGTACGATGGCAGAAGGATGGAAAGTGCTATTAAAGATGTGAATGAAGGCAAGTACAGTGTGAAAAAGGCTGCTGAACTTTATGCAATAAATCGGACAACACTTATGAACCATTTAAAAGGATACAAATGCAAACAAGTAGGTCACCCTACTGTTTTAAGTCATGAAGAAGAAAGGTTGTTAGTTCACTCACTAACAAAACTTGCTGATTGGGGATTTGGCTTTGACAGAGCCCAGCTGCGAACATGTGTTAGGGATTTTGTTGAGAGAATGGATCGCCCAAATCCTTTCAAAGATGGCCTACCTGGAATAGATTGGTGTAGGTCATTTGAAAATCGCTGGAAAACAGAATTAAGTCGCAGAGTTTCTCAAAACTTGCCAAAAAACCGTGCTCAATCCTGTTCAAAAGTTGTGATTTCTGATTTTTATGAGAAACTCACCAAAATAATCAATGAGCATGGTTTAAAAGACAAACCACAGAACATTTTTAACTGTGATGAGACAGGATTTCAAACAGATCCTGGATCTCAGAAGGTTCTCTGTAAGAGAGGCTGTCGTAATCCACACAAACTAGTGAGCAATGTCACTAAGGCAACTTATACGGTACTGGTAAGTTGCAATGCTATTGGTGATTATTTACCATTATTTGTAAATTACAAAGGGCTCCATTTATACTCTGACTGGTGTCAAAATGGACCACAAAATGCACGTTACAATTGTTCCCCATCAGGTTGGATGGAGTCTGATCAATTTTTGAATTGGTTTGAAAAGCTGTTCATACCTGAAACAGCAGGGCTTGAAGGAGCAAAActcctgatttatgatggccacaattctcacatatcattgaaacttgtcgaattggcagaaaagaacaatgtcatacttttttgccttccagcacacacatcacatatcctccaacctttggatgtggctgtctacAAAGGTGTGAAAAGTGCTTGGCGTGCAGTGCTGCAAGACTTCTTCAATGAAACAAAATTCCATAATGTAGACAAGCCTAATTTTCCAAGAGTTCTGAAAAGGTTGTTAGAGAAGGGCTGTCTCAGTCGTGCAAATGCCATTAGTGGGTTTGAAGCAGCTGGAATCTATCCTCTAAACAAGGAGAAGGTTTTTGAGAAGATTCAAACCACTGCTGCATTTGAAGAGGTCAATGAAGATTCTCTAACAGCCTCTACTTCATTAGCAAGTACTAGAAGATCACAGTCTACACAAACGTCTGATACACCTGCTCCACTGACTCCTAGAAAAGCTCTAGAGCAATCTCTATTGTCTGTTCTGAGAACAACACACAAACCCCATGAATCAGTTAGAAGAAAGCGATTGACTCGAACATTTGCTGAGAGTTTGACTTCACCAGAAGCCAAAAAACGTTTACAATCTCTCGAAAATCAAAAGAAGAAGCAAAATATTGAACAAGTGGGAATAAAAAAGACGAAATTAAAAAGAAGACTGATTCAAGAGAACAGCAGCTCTTCAGATGAAGCTGCTGATGAGCCTATTCCTCTTGAAGATTTGGAGATGAACAATGTAATAAAGAAGCCTGATTCTGTGGAAGATAAAGACTGGGTACTTGTTCAGTTCTCAGTGGAAAATTCTACAAAAAAAATTCATTACATTGGGAAAGTGACAGATGTGAATTCTCAAGTGGAATGTGACTTTCTTCGAAAAAAAAAGAAATTTTTTGTCCGACCCAATGTCCCTGATGTTTCATCTGTTCAACTGACAGACATTGTCTGTAAACTTAAACCCCCGAAAATTCGCAGAGGACTACATGATTTCAATCTACAGATGAGTGGTGTAGAGGGTGGTGCCCCTTTGCTAACATTGTTGGGCCCTTCTCTCAGGAACGGTTTGTCGCACTCCATACCTTTATTTTCTCAGCTCTTTGAGGCCACATTTGACAGATAA
- Protein Sequence
- MSSLSTREGAPCSEDPTDDDDSEQRGWGGPRWHPDARPLSRLAVECLEPEPDEPGLSRPGLCQQAITIIKIKYSKIYIKKKNIQEINWSLLPVDVASVQLSLEINLYKNSLSLVSIYSTYILPAAQQNTMPRPNQPTCNKRVYKTYDGRRMESAIKDVNEGKYSVKKAAELYAINRTTLMNHLKGYKCKQVGHPTVLSHEEERLLVHSLTKLADWGFGFDRAQLRTCVRDFVERMDRPNPFKDGLPGIDWCRSFENRWKTELSRRVSQNLPKNRAQSCSKVVISDFYEKLTKIINEHGLKDKPQNIFNCDETGFQTDPGSQKVLCKRGCRNPHKLVSNVTKATYTVLVSCNAIGDYLPLFVNYKGLHLYSDWCQNGPQNARYNCSPSGWMESDQFLNWFEKLFIPETAGLEGAKLLIYDGHNSHISLKLVELAEKNNVILFCLPAHTSHILQPLDVAVYKGVKSAWRAVLQDFFNETKFHNVDKPNFPRVLKRLLEKGCLSRANAISGFEAAGIYPLNKEKVFEKIQTTAAFEEVNEDSLTASTSLASTRRSQSTQTSDTPAPLTPRKALEQSLLSVLRTTHKPHESVRRKRLTRTFAESLTSPEAKKRLQSLENQKKKQNIEQVGIKKTKLKRRLIQENSSSSDEAADEPIPLEDLEMNNVIKKPDSVEDKDWVLVQFSVENSTKKIHYIGKVTDVNSQVECDFLRKKKKFFVRPNVPDVSSVQLTDIVCKLKPPKIRRGLHDFNLQMSGVEGGAPLLTLLGPSLRNGLSHSIPLFSQLFEATFDR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00365666; iTF_00365667;
- 90% Identity
- iTF_00365666;
- 80% Identity
- -