Canc008583.1
Basic Information
- Insect
- Conomelus anceps
- Gene Symbol
- ttk
- Assembly
- GCA_948455865.1
- Location
- OX418224.1:34058297-34066504[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.00085 0.47 12.6 0.0 1 37 220 255 220 263 0.87 2 2 5.8e-11 3.2e-08 35.5 0.0 2 39 271 308 270 312 0.91
Sequence Information
- Coding Sequence
- ATGTCACATAGACTATGGTTTAAAGATTTTGGGGGCATACTCCCTCTCTGGAAGGCATACTTTTATGTGGGTTCAAAAAATACTGCAATTGTCATAAGTGGAATTGAAGGTGAAGATGTAAAATCTTGCATTGAATTTATCTACAAAGGAGAAATCAGTGTAAAGGCAGATCGTTTATGTTCTGTTTTGAAAGCGGCAGAAGCTTTGAAAATTTGTGGACTCACTGATGTCAAATGTGGAATGACTCCTACAAACGAAAGTGACACCACATCTATCGGACCAGTAGTTGTAAACAATCAATCAGAGAAAGACAGTAGCAATAAGTTAGTATTCACGCGCCAATCGCCTTCTTCAGACAACCGCAGTAATAAAACAGCGGACGAAACCAGTGCAGACTCCAATAATCATAAAGATATGCATGGAGAAGATTCGTCAATTGTCGTTTACCCTGATATGCTGATGCTAGAAGAAAGTGTAGACGGCGGAGAAAATTGTGGAATGATAGCCGAGTGCCGTAGCAGGTATCTGTTCATAGATAAACTACGAAACTCCTGGGCCATCTTTGTAATGGTGACCGTTTTGATTGGCCAGCAAAAAAGACTCTGCTCTTTGCTTCTCAATAGTGGTTGTCTCAACTCAATTGTTTTTCTGATCAATAGCGAAGAAGCAATGCAAGCTGCTCTGGAAGATATGAAATCTGGTAAAAATCTTGTCAAGTCAGCAGAAAAACACCGCGTGCCCAAAACGACATTATACTGTAGAGCAAGAGCCATTGGCGCGTGCTCGAGAATACAGAGAAGAGGCTATCCTAGGGAGAAAATGATTGGTGCACTCCAGGCAGTAGCAGGTGGTTACAGCTTACAGAATGCTTCTACAGAGTTCGGTATACCTAAAACAGTACTATGGCGAAGAGTGAAAAAAGAATCTGGGAATCGATGTACTTATAGCAAACCGATAAAAATGCAATCGATAAGTCCACATGCAAATACAGTCGCTGAAGATAATGTGTCGATAAGAAGAGTGTCTCCTCAATATCAGGTTTGTAAGCTCATGAGATTCCTCACTGGGAAAGTTTCTTTAGAAACAATTCAATTCAACAATTTGTTTCAGATTCCTAAAGCAACTCTATTCAGATGGGAAAAAGTTGCTGCTGTGAATAACAAAGAACCTCAGGAGCACTTTATTAGTAGTGGTGAAAATGTTGACGTAATAAACGCTGAAGAAATATCGAAAGAAAGTGGAAGAGAATTACTGGCAGTTGAAAGTGAGAACGATGATGAAGTTATCGAGATTGCTTCTTCAAGTAATGTGGATCAGGTAATCATATTATACATTTCAGTGTATATTCGCGGCCTGCAAAAGCATGGAATTCTATAA
- Protein Sequence
- MSHRLWFKDFGGILPLWKAYFYVGSKNTAIVISGIEGEDVKSCIEFIYKGEISVKADRLCSVLKAAEALKICGLTDVKCGMTPTNESDTTSIGPVVVNNQSEKDSSNKLVFTRQSPSSDNRSNKTADETSADSNNHKDMHGEDSSIVVYPDMLMLEESVDGGENCGMIAECRSRYLFIDKLRNSWAIFVMVTVLIGQQKRLCSLLLNSGCLNSIVFLINSEEAMQAALEDMKSGKNLVKSAEKHRVPKTTLYCRARAIGACSRIQRRGYPREKMIGALQAVAGGYSLQNASTEFGIPKTVLWRRVKKESGNRCTYSKPIKMQSISPHANTVAEDNVSIRRVSPQYQVCKLMRFLTGKVSLETIQFNNLFQIPKATLFRWEKVAAVNNKEPQEHFISSGENVDVINAEEISKESGRELLAVESENDDEVIEIASSSNVDQVIILYISVYIRGLQKHGIL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -