Canc024295.1
Basic Information
- Insect
- Conomelus anceps
- Gene Symbol
- Arid5b
- Assembly
- GCA_948455865.1
- Location
- OX418219.1:15686565-15691013[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.1e-23 1.2e-18 69.6 0.0 1 84 153 234 153 235 0.94
Sequence Information
- Coding Sequence
- ATGTACTCATGTTTTGTGTGTTATGTTGCAGACGCGTTGCATTGGGAGACAAGTATAGGAGTGGTGGTGTTGAGCTTTCCACGCTACTGTCGCTACAGAGGCATCCTGAAGAGGCTGGAGGGCGTTCACAACAAATGGCTGAGGACGGCGCTGGTGGTCGCCCTGGGAGGATTCACTGTGCCCTGTCGCAACACACGCGTCCTCTTCTGCAAGGACACCTTCGACTACCCTGACCTCGAAGGACACGAACTCCTGTGTAATCATCTAGCACCGAAGCTCAAAGGACGACCTCGGAAAAAGAGAAAGATCTACAGTGACACGCCAGAAGGCTCAGACTGCGAATCAGAGTCATCGCAATCGACTTCTTCTTCAACTAAGACCAAAGTCAGCTATCCTCTGGAGAAAAGCAGGAATGGTCTTAGTCCTAGAAGAAGTACGCGCGGCACTGGCTCCATACAGGAGAAAGAGTTCCTTGATAAGCTGTTTGCTTTCATGAAAGGCAAACACAATCCTATCACTAGAATACCCAGCATTGGGTTTAAAGAAGTTGATCTCTTTTCGTTTTACCATAAAGTTCAGAATTTGGGTGGCTATGACGCAGTCACTGCTGGACGAATGTGGAAGTATGTCTATGAGGAATTGGGAGGCGACCAGAATAGCACAAGTGCTGCCACTATTTCCAGAAGACATTATGAAAGGTGGGATGATTATATCGTTTTAAAAATCTACTGCATTCATTAA
- Protein Sequence
- MYSCFVCYVADALHWETSIGVVVLSFPRYCRYRGILKRLEGVHNKWLRTALVVALGGFTVPCRNTRVLFCKDTFDYPDLEGHELLCNHLAPKLKGRPRKKRKIYSDTPEGSDCESESSQSTSSSTKTKVSYPLEKSRNGLSPRRSTRGTGSIQEKEFLDKLFAFMKGKHNPITRIPSIGFKEVDLFSFYHKVQNLGGYDAVTAGRMWKYVYEELGGDQNSTSAATISRRHYERWDDYIVLKIYCIH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -