Basic Information

Transcription Factor Domain

TF Family: zf-GATA
Domain: zf-GATA domain
PFAM: PF00320
TF Group: Zinc-Coordinating Group
Description: This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 6 0.011 24 5.3 0.1 17 35 17 35 13 36 0.87

2 6 0.011 24 5.3 0.1 17 35 59 77 55 78 0.87

3 6 0.011 24 5.3 0.1 17 35 101 119 97 120 0.87

4 6 0.011 24 5.3 0.1 17 35 143 161 139 162 0.87

5 6 0.011 24 5.3 0.1 17 35 185 203 181 204 0.87

6 6 0.72 1.6e+03 -0.5 0.1 18 27 228 237 224 242 0.72

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	6	0.011	24	5.3	0.1	17	35	17	35	13	36	0.87
2	6	0.011	24	5.3	0.1	17	35	59	77	55	78	0.87
3	6	0.011	24	5.3	0.1	17	35	101	119	97	120	0.87
4	6	0.011	24	5.3	0.1	17	35	143	161	139	162	0.87
5	6	0.011	24	5.3	0.1	17	35	185	203	181	204	0.87
6	6	0.72	1.6e+03	-0.5	0.1	18	27	228	237	224	242	0.72

Coding Sequence: ATGAGCTGCACGGAGCGCGCGGAGCAGTCGGTGAACAGCGACACGAGCAGCGGCACGTTGTCCACCTGCTCGATGTGCGGCCGGATGTTCAGGCTGATGGGTCGTCATACCTGCATGATCTGTATCATGAGCTGCACGGAGCGCGCGGAGCAGTCGGTGAACAGCGACACGAGCAGCGGCACGTTGTCCACCTGCTCGATGTGCGGCCGGATGTTCAGGCTGATGGGTCGTCATACCTGCATGATCTGTATCATGAGCTGCACGGAGCGCGCGGAGCAGTCGGTGAACAGCGACACGAGCAGCGGCACGTTGTCCACTTGCTCGATGTGCGGCCGGATGTTCAGGCTGATGGGTCGTCATACCTGCATGATCTGTATCATGAGCTGCACGGAGCGCGCGGAGCAGTCGGTGAACAGCGACACGAGCAGCGGCACGTTGTCCACCTGCTCGATGTGCGGCCGGATGTTCAGGCTGATGGGTCGTCATACCTGCATGATCTGTATCATGAGCTGCACGGAGCGCGCGGAGCAGTCGGTGAACAGCGACACGAGCAGCGGCACGTTGTCCACCTGCTCGATGTGCGGCCGGATGTTCAGGCTGATGGGTCGTCATACCTGCATGATCTGTATCATGAGCTGCACGGAGCGCGCGGAGCAGTCGGTGAACAGCGACACGAGCAGCGGCACGTTGTCCACCTGCTCGATGTGCGGCCGGATGTTCTCGATGCCGCGGGGCAGCTTCGCCTGGATAGAGGAAGTAATACAACATTTCAGAACATTTTATCATGTACTTGATTGTGTTCTACGTATATAA
Protein Sequence: MSCTERAEQSVNSDTSSGTLSTCSMCGRMFRLMGRHTCMICIMSCTERAEQSVNSDTSSGTLSTCSMCGRMFRLMGRHTCMICIMSCTERAEQSVNSDTSSGTLSTCSMCGRMFRLMGRHTCMICIMSCTERAEQSVNSDTSSGTLSTCSMCGRMFRLMGRHTCMICIMSCTERAEQSVNSDTSSGTLSTCSMCGRMFRLMGRHTCMICIMSCTERAEQSVNSDTSSGTLSTCSMCGRMFSMPRGSFAWIEEVIQHFRTFYHVLDCVLRI*

Sequence clustering based on sequence similarity using MMseqs2