Basic Information

Insect: Conogethes punctiferalis
Gene Symbol: -
Assembly: GCA_031163375.1
Location: CM062077.1:3917320-3919323[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.011 0.88 10.8 1.3 2 23 149 170 148 170 0.96

2 12 0.0002 0.016 16.3 2.4 1 23 176 199 176 199 0.95

3 12 0.00018 0.014 16.5 2.7 1 23 215 237 215 237 0.98

4 12 0.00012 0.0096 17.0 2.5 1 23 242 266 242 266 0.98

5 12 0.0085 0.67 11.2 1.3 1 23 272 295 272 295 0.97

6 12 2.3 1.8e+02 3.5 0.5 2 21 304 323 303 324 0.90

7 12 0.074 5.8 8.2 6.5 1 23 427 449 427 450 0.96

8 12 2.4 1.8e+02 3.5 0.6 1 20 458 477 458 479 0.89

9 12 0.11 8.6 7.7 4.0 2 23 487 508 486 508 0.97

10 12 0.0081 0.63 11.2 6.4 1 23 511 534 511 534 0.96

11 12 0.0078 0.61 11.3 2.2 2 23 540 561 539 561 0.96

12 12 0.0033 0.26 12.5 6.4 1 23 567 590 567 590 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.011	0.88	10.8	1.3	2	23	149	170	148	170	0.96
2	12	0.0002	0.016	16.3	2.4	1	23	176	199	176	199	0.95
3	12	0.00018	0.014	16.5	2.7	1	23	215	237	215	237	0.98
4	12	0.00012	0.0096	17.0	2.5	1	23	242	266	242	266	0.98
5	12	0.0085	0.67	11.2	1.3	1	23	272	295	272	295	0.97
6	12	2.3	1.8e+02	3.5	0.5	2	21	304	323	303	324	0.90
7	12	0.074	5.8	8.2	6.5	1	23	427	449	427	450	0.96
8	12	2.4	1.8e+02	3.5	0.6	1	20	458	477	458	479	0.89
9	12	0.11	8.6	7.7	4.0	2	23	487	508	486	508	0.97
10	12	0.0081	0.63	11.2	6.4	1	23	511	534	511	534	0.96
11	12	0.0078	0.61	11.3	2.2	2	23	540	561	539	561	0.96
12	12	0.0033	0.26	12.5	6.4	1	23	567	590	567	590	0.98

Sequence Information

Coding Sequence: ATGATgtctgataatgatgagaaAACTACATCACAATTGATGACTTACTTTCAAGACTCAAATGAAGCAAGAAACATACAAGAACCAATAGACATCCGGCAACAAACTAGCAATGTTCAGCAAGAGTCAAACAACTTGCAACAAGAGTTAAACAACTTGCAACAAGAGTCAAACAACTTGCAAAAAGAGTCAAACAATTTACAACAACAGTCAAACAAATTACAGCAAGAAACAAACTTTATACAACAAGACATAAACAATGTAACGGAGGATGGACAAGATGAAAACCAACAAGAGATGATGAATATGTTCGCCAGTGTTTGGGTGAAAGTGGAGGTGTCCGATGAACATGACCAGGAAGACAACCAAATTGTGTTTGAGTCGAATCAGGATAGCAGCACAAAACCGAGGTTGAAACGCAATCGTATAAGCAGCTATTCAATGAAATGCAATCAGTGTGATTACACAACTGCCTTCAAGAACTGTTTAGAAATTCACATTTTGGGCCATGGCGGTGCCAAAACGTTCTCATGTACCCAATGTGACTACACAACTAAACACCCGACCGCGTTACAGAGGCATATATTTGTGAAGCATCAATGTACATCAGATGATGGGGCAGACTTAAAGGCGCCGCTTGTATTCAAATGTGAAAAATGTGATTACACGACAACATACAAATGGAACTTATATGCCCACAATCGCAAGCATTTGGAGAAAAAGTACAAATGCAATGTTCCAGACTGCGATTATGTGACTTCATATAGTCACAATCTCCAGAAACATAGCAAGAGACATAACGATAGCACATTTTACAAATGCGATAAGTGTCCGTTTGTGACGCGCTTCGAAGGGCACATAACTAGGCATTTGGCTAAAATACACAATGTGGTCATGGAGAATATGAGTAAGTGTGATTTATGCGATTTCTCCACGAAGATTAGGTGGAGATTGAATATACACAAGCAGAGAAGCCGACAGGGTAGTTTGCTGAAATGCAAATATTGTGACTTTGAAACATTTTATATGTGCGAAAGTAAGAAACATAAAGTAACTCATTACGgtgaaatttataataaaaagaaggCTGCTTTAAATCTTGGCAGCACTGGGGATGCTTGTGATACTCCAGCTAGTGATACCTGCTCACACATGAATGAGTCAGAGGTGGCAAAAGATAGTGAGATGGACGTTCAAACTGAGAAGTACACCCTGGATCCAGATTGCTTAGACTGGCATAGCATTCAAGTCCTTGAGTCTGAGGACAAGGACAAACCTTTCCAATGTCACATGTGCAATTACACAGCACGCTTCAAAGCGTCTGTGCAAAGGCATTTTCAAAGACACCACACCGGGAGCCACAACAGGCCGTACAAGTGCATCAACTGTGATTTTTCAACGAAAACTAAAGATCAGATCGCTTTGCACAATAAACGGAGCAAATCTAATGTTGTGATCTATTGTAACAATTGTGAATTCTCTACTAAATTCAAATGCCAGTTAGTCATGCATCAGAAATCTCATTATGAGCACAAGTGTCCAAAATGTGAATATACTTGTAAGCTTAAGTATGAGTTGCAGAAACATTTCACTACAGTTCACCTAGGGAGTGTCATAAAATGTAAGTACTGTGATTATACAGCGTCCAGGAAGGACAGTTTGCTCTGTCACATGACAGTTCACACGGGTGTGAAACCATATAAATGTATGCATTGTGATTACACATCGGTTAGAAAATGTTTGCTTAATAACCATATTAAGAGGTACCATAGCGATATAAGAGATGATGTTACCATCGTGAGTGAGAATAAAATTCAGTCTTTGAAGTTGCCAGTGGAGAATATTGTAGAGTTACAGCAATTGGATTTGTAG
Protein Sequence: MMSDNDEKTTSQLMTYFQDSNEARNIQEPIDIRQQTSNVQQESNNLQQELNNLQQESNNLQKESNNLQQQSNKLQQETNFIQQDINNVTEDGQDENQQEMMNMFASVWVKVEVSDEHDQEDNQIVFESNQDSSTKPRLKRNRISSYSMKCNQCDYTTAFKNCLEIHILGHGGAKTFSCTQCDYTTKHPTALQRHIFVKHQCTSDDGADLKAPLVFKCEKCDYTTTYKWNLYAHNRKHLEKKYKCNVPDCDYVTSYSHNLQKHSKRHNDSTFYKCDKCPFVTRFEGHITRHLAKIHNVVMENMSKCDLCDFSTKIRWRLNIHKQRSRQGSLLKCKYCDFETFYMCESKKHKVTHYGEIYNKKKAALNLGSTGDACDTPASDTCSHMNESEVAKDSEMDVQTEKYTLDPDCLDWHSIQVLESEDKDKPFQCHMCNYTARFKASVQRHFQRHHTGSHNRPYKCINCDFSTKTKDQIALHNKRSKSNVVIYCNNCEFSTKFKCQLVMHQKSHYEHKCPKCEYTCKLKYELQKHFTTVHLGSVIKCKYCDYTASRKDSLLCHMTVHTGVKPYKCMHCDYTSVRKCLLNNHIKRYHSDIRDDVTIVSENKIQSLKLPVENIVELQQLDL*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -