Basic Information

Insect: Conogethes punctiferalis
Gene Symbol: -
Assembly: GCA_031163375.1
Location: CM062103.1:1411285-1414191[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 5.2 4.1e+02 2.4 0.1 1 21 279 299 279 300 0.91

2 18 8.8e-06 0.00069 20.6 2.9 1 23 312 334 312 334 0.99

3 18 0.52 41 5.5 0.4 2 23 338 359 337 359 0.95

4 18 0.4 32 5.9 3.7 3 23 366 387 364 387 0.95

5 18 0.0011 0.083 14.0 0.1 2 23 442 464 441 464 0.96

6 18 0.0099 0.77 11.0 4.2 1 23 470 493 470 493 0.96

7 18 0.0085 0.66 11.2 1.5 1 21 497 517 497 518 0.93

8 18 0.00038 0.029 15.4 4.7 1 23 526 549 526 549 0.95

9 18 0.098 7.7 7.8 1.6 1 23 554 577 554 577 0.94

10 18 0.00061 0.048 14.8 0.3 3 23 591 611 589 611 0.96

11 18 0.03 2.3 9.5 0.7 1 23 616 638 616 638 0.97

12 18 0.02 1.6 10.0 2.1 2 23 675 696 674 696 0.95

13 18 0.13 10 7.5 0.0 2 22 701 720 700 720 0.93

14 18 0.026 2 9.7 1.4 2 23 741 763 740 763 0.96

15 18 0.0014 0.11 13.6 4.8 1 23 769 791 769 791 0.98

16 18 0.00087 0.068 14.3 7.1 2 23 798 819 797 819 0.96

17 18 0.2 15 6.9 0.6 1 23 825 848 825 848 0.88

18 18 2.7 2.1e+02 3.3 2.7 3 23 855 876 854 876 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	5.2	4.1e+02	2.4	0.1	1	21	279	299	279	300	0.91
2	18	8.8e-06	0.00069	20.6	2.9	1	23	312	334	312	334	0.99
3	18	0.52	41	5.5	0.4	2	23	338	359	337	359	0.95
4	18	0.4	32	5.9	3.7	3	23	366	387	364	387	0.95
5	18	0.0011	0.083	14.0	0.1	2	23	442	464	441	464	0.96
6	18	0.0099	0.77	11.0	4.2	1	23	470	493	470	493	0.96
7	18	0.0085	0.66	11.2	1.5	1	21	497	517	497	518	0.93
8	18	0.00038	0.029	15.4	4.7	1	23	526	549	526	549	0.95
9	18	0.098	7.7	7.8	1.6	1	23	554	577	554	577	0.94
10	18	0.00061	0.048	14.8	0.3	3	23	591	611	589	611	0.96
11	18	0.03	2.3	9.5	0.7	1	23	616	638	616	638	0.97
12	18	0.02	1.6	10.0	2.1	2	23	675	696	674	696	0.95
13	18	0.13	10	7.5	0.0	2	22	701	720	700	720	0.93
14	18	0.026	2	9.7	1.4	2	23	741	763	740	763	0.96
15	18	0.0014	0.11	13.6	4.8	1	23	769	791	769	791	0.98
16	18	0.00087	0.068	14.3	7.1	2	23	798	819	797	819	0.96
17	18	0.2	15	6.9	0.6	1	23	825	848	825	848	0.88
18	18	2.7	2.1e+02	3.3	2.7	3	23	855	876	854	876	0.95

Sequence Information

Coding Sequence: ATGGAAACGTTGGAAGACATAGATTTGAAGATCAAAGCTCAATACGACGATGGCCAAGAAGTAAATAACGAAGAGGATCAGCGAACCAATCTCCATTGTCTAAAACAAAAGCTGGCATCAGTATGCCGGTCTTCGAGGTTTTGCGGCATTTGTTTAGAATCAGATGGAACAGATAAAATATGGTCCGTGCACACAGAATTCGATATAGCCGTCGGAGAGCAAACTCACAAGAAACTCTTAAAAGACATTGTCGATTATATTCTTAATAATGAGAGTCAACAGACGATGGCGAGCTCATACTTATGCAGTCATTGTACAGAAAAATCAATACAATCATACTTATTCATTTACAATGCTAAGCAGCTCTCCAAAATAATACGCAACTGCGTGGAAGAGTTACATAGTAAAGTTGTAGATGTTAACGATAAACTAAAAACAATTAGCAATTATGACAATTCAAACATCGTTATTGTGTTAGACCACGATATAAACATGTATGATTACATAGATATTGGTAAAATGACCGAAATAATAGCCAAAGAAACACCAAAAGATGAAGATGAAGTGAAACTGGGTGTGAAAAGTAAAGTAGAACATATTAGCGAAGTAAACGATTACATTCCTGTGACAAAATTAGAAAACATTGATAGTGTAGACAATACGGAACAGGATTATGTATTAATGTGCCAAGATAGTAATGAGGATGGCATTGAAATAACATTTGTAGATGACGACTTATCGACTTCAATGAATCCGATTGAGGAAGAAAGTTTGGAACTGAATACGCTGTCGAGTCCAAGGAAAAAGAAAGCAAAGTTCATGCAGAAACTGACCTTCGAATGTCCTAGATGCAGAGTAGTTATTCCCAATTACAAAGCATGGAAGGAccattataaaaattgtaaaaagcaGAAAGTGGACCCCAAAAAACTCTTTAGATGTAAAATTTGTACAGAAACTTTTATAACTCAGAGATCTTTGAACACTCATTACAAGACTCATTTGAAGACGAGATGTAAAGTGTGTCATTTCATAGTCTCTGAGGCAGATCTAGCTGAACATATGAAAATCAATCATGACGATTATGTACATTTGTGTAAATTGTGCAAATTCTTCTCTTATTCTGAAGATGGATTGAAAACCCACATGAATAAGTTCCACAGCGGTCCGCAATGTGCGTTATGCTTGAAGAAAGTAAAAGAGCAAGATTTAAAACATCACAGATGTAAATTCAACTGTCTGGAGTGCGTAGacaacatttgtattcattacAAGTATTTATTGTCCTTTAGAGAGCAGTTTATCAATAAAGCAGTTAAAATTCAATGTCCGGACTGCGATTATGTGTGTCCTAGGAGAGAAGCATTGTTGGGCCACGTAAATAGGGAACACTTAGACCACCACCCATTCACCTGTGCTCATTGCGAACAGCAGTTCTATTCTCGCACGACTCTTAGATATCATATAAACCAGTTTCATAAGGAACGGCACATATGCACATTTTGTGATCAGGAGTTCTTCACCAAAAACTCCTTGGAGAATCATACAAAGCTCTGCCAATGCATTGAGAGAGACTTCAAATGTAACTATTGCACATGTTCGTTCAGTACATCGGATGAGCTGGTGAATCATTTCAAGTTACGGCACGAAGAGGACACTTTCAACTGCAATCTTTGCGAGAAGAAATTCTTATCTAGTGTGAAACTACAGGACCATACGTTTAAAGTTCACGGCGGGTTGCAAATAAAGAGAAAGCGGTCTCTCTTGGATTGTCCCGTTTGCGACGAAAAGTTTGAAAAAAGGCGGCTGTTATTACAGCATGTGAAATCACATCCGGATGAGAGATTCCCTTGCAAGGAATGCGATGAGGATTTCGATTGCATAAAGAAACTGCAAGCCCACGTTCGCATACACTACGATGACGTCATCCAATGCGTTGACTGCAAAAAAGTGCTAACGAAAACGTTCTTCCCTCACCACATGGTTTATTGCAACGCCGGAAGACCGGCAGAGAACGTTTGCACCTGCGAAACGTGCGGTCGGACTTATCCCAGCGAAGTTCAACTGAAATTCCATCGTAAAGTGCATCTGGAGAAAGTTCCATGTCCAGTTTGCCAAAAGCCTACCCGTCCGGTGTACTTGAAAGGCCACATGAAGCGCTGCAAGCCAAAGAAAGCTGAAGAAGGAACGAAACCTAAACAGAAGTATATAAAAAGCGTTAAATGCGAATGGTGTGACCACAAGATGTCGAGATATAGCGAGTTGGAATCCCACGTGAACAGATTCCATTTGCACGTGAAGCCGTATCAGTGCAGTTATTGCAAGAAATGCTTTTTCGGCAAGGAACGTTTGAAGGAGCATTTGGTTACCCATACGTCCGCAAAAGCTTGTTATTGCAGTGTGTGTAACAAGAAATTCCAAAACAATGCTTGTCTGAAGCTTCATATGAGGAAGCATACAGGATATGCCCCTTACGCTTGCGATATATGCGGGGATAGGTTTAGAACTTCCAGTATTATGAACACGCATAAAGTGAAGAAGCATTCAGAGAGGACAGTGGCATGTCCGCTTTGCGATGCAATGTTCCATTTGACTAGGGAAATGAGACATCATTTTAAGAAAGTCCATTGGAAGCAGAAGGGAAAGAAATTTGATCCGCGCGATGTGAAGGAATTAAGTCCTGCGTTCTACCATTTGTTTGAAGACGGTAGGCTGCCTAAAGTGGCCGGCGAAGAGTTGTATATCTCGTCGAAGTTCAATGAGAAATTTGACTAG
Protein Sequence: METLEDIDLKIKAQYDDGQEVNNEEDQRTNLHCLKQKLASVCRSSRFCGICLESDGTDKIWSVHTEFDIAVGEQTHKKLLKDIVDYILNNESQQTMASSYLCSHCTEKSIQSYLFIYNAKQLSKIIRNCVEELHSKVVDVNDKLKTISNYDNSNIVIVLDHDINMYDYIDIGKMTEIIAKETPKDEDEVKLGVKSKVEHISEVNDYIPVTKLENIDSVDNTEQDYVLMCQDSNEDGIEITFVDDDLSTSMNPIEEESLELNTLSSPRKKKAKFMQKLTFECPRCRVVIPNYKAWKDHYKNCKKQKVDPKKLFRCKICTETFITQRSLNTHYKTHLKTRCKVCHFIVSEADLAEHMKINHDDYVHLCKLCKFFSYSEDGLKTHMNKFHSGPQCALCLKKVKEQDLKHHRCKFNCLECVDNICIHYKYLLSFREQFINKAVKIQCPDCDYVCPRREALLGHVNREHLDHHPFTCAHCEQQFYSRTTLRYHINQFHKERHICTFCDQEFFTKNSLENHTKLCQCIERDFKCNYCTCSFSTSDELVNHFKLRHEEDTFNCNLCEKKFLSSVKLQDHTFKVHGGLQIKRKRSLLDCPVCDEKFEKRRLLLQHVKSHPDERFPCKECDEDFDCIKKLQAHVRIHYDDVIQCVDCKKVLTKTFFPHHMVYCNAGRPAENVCTCETCGRTYPSEVQLKFHRKVHLEKVPCPVCQKPTRPVYLKGHMKRCKPKKAEEGTKPKQKYIKSVKCEWCDHKMSRYSELESHVNRFHLHVKPYQCSYCKKCFFGKERLKEHLVTHTSAKACYCSVCNKKFQNNACLKLHMRKHTGYAPYACDICGDRFRTSSIMNTHKVKKHSERTVACPLCDAMFHLTREMRHHFKKVHWKQKGKKFDPRDVKELSPAFYHLFEDGRLPKVAGEELYISSKFNEKFD*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -